Wall clock time and date at job start Sun Mar 7 2021 08:08:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47248 * 180.02562 * 5 3 2 7 7 H 1.08996 * 112.84904 * 316.19618 * 6 5 3 8 8 C 1.53789 * 113.61438 * 87.50222 * 6 5 3 9 9 C 1.53782 * 87.08138 * 139.98021 * 8 6 5 10 10 H 1.08997 * 113.69057 * 220.00368 * 9 8 6 11 11 N 1.46500 * 113.60953 * 89.11705 * 9 8 6 12 12 C 1.34774 * 119.99968 * 107.50832 * 11 9 8 13 13 O 1.21571 * 120.00284 * 359.97438 * 12 11 9 14 14 C 1.47658 * 119.99994 * 179.97438 * 12 11 9 15 15 C 1.40175 * 119.97179 * 359.97438 * 14 12 11 16 16 C 1.36352 * 120.66663 * 179.97438 * 15 14 12 17 17 C 1.39333 * 120.23773 * 0.02562 * 16 15 14 18 18 N 1.37397 * 133.24885 * 180.02562 * 17 16 15 19 19 C 1.36875 * 109.97920 * 179.97438 * 18 17 16 20 20 C 1.34185 * 109.96409 * 0.02562 * 19 18 17 21 21 C 1.50698 * 126.53827 * 180.02562 * 20 19 18 22 22 O 1.42901 * 109.47133 * 254.97378 * 21 20 19 23 23 Si 1.86304 * 109.47122 * 14.97160 * 21 20 19 24 24 C 1.40912 * 119.64008 * 359.97438 * 17 16 15 25 25 C 1.39188 * 119.97220 * 179.71968 * 14 12 11 26 26 C 1.53778 * 87.08212 * 334.57025 * 9 8 6 27 27 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 28 28 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 29 29 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 30 30 H 1.09008 * 109.47488 * 300.00148 * 5 3 2 31 31 H 1.09001 * 109.47517 * 59.99934 * 5 3 2 32 32 H 1.08999 * 113.61224 * 254.53205 * 8 6 5 33 33 H 1.09003 * 113.61275 * 25.43293 * 8 6 5 34 34 H 0.97005 * 120.00120 * 287.49774 * 11 9 8 35 35 H 1.07996 * 119.66381 * 359.95234 * 15 14 12 36 36 H 1.07998 * 119.88239 * 179.97438 * 16 15 14 37 37 H 0.96998 * 125.01384 * 359.93332 * 18 17 16 38 38 H 1.07996 * 125.01292 * 179.97438 * 19 18 17 39 39 H 1.09000 * 109.47365 * 134.97420 * 21 20 19 40 40 H 0.96697 * 114.00361 * 60.00019 * 22 21 20 41 41 H 1.48503 * 109.99939 * 58.68456 * 23 21 20 42 42 H 1.48500 * 109.99867 * 180.02562 * 23 21 20 43 43 H 1.08001 * 120.30501 * 0.02562 * 25 14 12 44 44 H 1.09007 * 113.60786 * 270.88353 * 26 9 8 45 45 H 1.08996 * 113.69662 * 139.99496 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4247 3.3540 -0.6944 8 6 4.1165 3.3494 1.4083 9 6 5.3818 4.0666 0.9089 10 1 6.1889 4.0915 1.6410 11 7 5.1159 5.3771 0.3105 12 6 5.4583 6.5012 0.9705 13 8 5.9873 6.4278 2.0626 14 6 5.1907 7.8221 0.3671 15 6 4.5812 7.9061 -0.8923 16 6 4.3272 9.1184 -1.4625 17 6 4.6725 10.2929 -0.7971 18 7 4.5450 11.6246 -1.1103 19 6 5.0511 12.3938 -0.0975 20 6 5.5150 11.6082 0.8864 21 6 6.1489 12.0643 2.1752 22 8 7.5611 11.8550 2.1117 23 14 5.8008 13.8766 2.4312 24 6 5.2857 10.2218 0.4695 25 6 5.5392 8.9827 1.0518 26 6 5.5208 2.9350 -0.1231 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.9565 0.7806 0.8892 31 1 3.9557 0.7810 -0.8908 32 1 3.3009 4.0272 1.6602 33 1 4.3112 2.6120 2.1871 34 1 4.6936 5.4358 -0.5608 35 1 4.3104 7.0016 -1.4165 36 1 3.8573 9.1684 -2.4336 37 1 4.1545 11.9690 -1.9288 38 1 5.0743 13.4735 -0.0917 39 1 5.7341 11.4937 3.0061 40 1 7.9978 12.3336 1.3939 41 1 4.3350 14.1120 2.4673 42 1 6.4212 14.3388 3.6987 43 1 6.0057 8.9227 2.0240 44 1 6.0994 2.0843 0.2371 45 1 5.8392 3.2769 -1.1078 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_13287722.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:08:22 Heat of formation + Delta-G solvation = -64.132188 kcal Electronic energy + Delta-G solvation = -29075.708656 eV Core-core repulsion = 24833.266528 eV Total energy + Delta-G solvation = -4242.442128 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.47532 -41.68429 -40.94976 -39.44558 -37.85523 -37.41684 -37.28516 -34.59222 -33.24989 -31.79282 -30.70971 -30.29347 -28.43365 -26.74844 -26.46479 -25.41645 -24.02898 -23.47084 -21.84434 -21.67398 -20.76860 -20.19670 -19.31519 -18.58047 -18.39893 -17.66028 -17.48964 -17.42573 -17.25995 -16.83693 -16.21610 -15.98170 -15.85832 -15.55221 -15.32303 -15.14570 -15.06361 -14.76006 -14.70332 -14.66266 -14.11087 -14.02102 -13.78668 -13.64482 -13.55683 -13.38174 -12.99084 -12.80382 -12.52169 -12.26986 -12.16565 -12.14017 -11.85921 -11.76288 -11.64812 -11.32793 -11.26164 -10.79881 -10.77048 -10.30523 -9.97905 -9.30818 -8.81464 -5.07293 -0.03005 0.20565 1.25416 1.31953 1.48685 1.66453 1.75049 1.98368 2.01357 2.02223 2.18151 2.98741 3.38881 3.42967 3.59261 3.59406 3.68253 3.75342 3.79966 3.83260 3.88590 3.90438 4.09560 4.17414 4.24074 4.30692 4.35737 4.39179 4.43537 4.45228 4.52170 4.58867 4.60316 4.68022 4.69459 4.78815 4.86653 5.03208 5.04754 5.08766 5.18025 5.27142 5.39952 5.44753 5.51378 5.61609 5.66958 5.99655 6.37022 6.59546 6.71050 6.78436 7.36521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.505 6.505 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.101 0.899 8 C -0.147 4.147 9 C 0.122 3.878 10 H 0.107 0.893 11 N -0.711 5.711 12 C 0.568 3.432 13 O -0.536 6.536 14 C -0.168 4.168 15 C -0.066 4.066 16 C -0.134 4.134 17 C 0.119 3.881 18 N -0.585 5.585 19 C 0.061 3.939 20 C -0.192 4.192 21 C -0.034 4.034 22 O -0.540 6.540 23 Si 0.687 3.313 24 C -0.103 4.103 25 C 0.008 3.992 26 C -0.140 4.140 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.109 0.891 31 H 0.109 0.891 32 H 0.075 0.925 33 H 0.092 0.908 34 H 0.400 0.600 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.421 0.579 38 H 0.179 0.821 39 H 0.113 0.887 40 H 0.376 0.624 41 H -0.256 1.256 42 H -0.254 1.254 43 H 0.138 0.862 44 H 0.100 0.900 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.642 0.871 -7.059 7.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.392 6.392 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.186 4.186 9 C 0.016 3.984 10 H 0.125 0.875 11 N -0.363 5.363 12 C 0.356 3.644 13 O -0.413 6.413 14 C -0.173 4.173 15 C -0.086 4.086 16 C -0.154 4.154 17 C 0.010 3.990 18 N -0.188 5.188 19 C -0.065 4.065 20 C -0.199 4.199 21 C -0.146 4.146 22 O -0.344 6.344 23 Si 0.589 3.411 24 C -0.108 4.108 25 C -0.012 4.012 26 C -0.178 4.178 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.127 0.873 31 H 0.127 0.873 32 H 0.094 0.906 33 H 0.111 0.889 34 H 0.236 0.764 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.259 0.741 38 H 0.195 0.805 39 H 0.130 0.870 40 H 0.223 0.777 41 H -0.181 1.181 42 H -0.178 1.178 43 H 0.156 0.844 44 H 0.119 0.881 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -1.037 1.425 -5.321 5.606 hybrid contribution -1.027 -0.458 -0.863 1.418 sum -2.064 0.968 -6.185 6.592 Atomic orbital electron populations 1.23293 0.76022 1.03910 1.02649 1.86511 1.23731 1.33597 1.84078 1.23863 0.92353 0.81350 0.72294 1.90685 1.67269 1.36326 1.44923 1.21460 0.87460 0.99193 1.06150 1.22534 0.96362 0.93911 0.99323 0.88045 1.23528 0.98686 1.00102 0.96262 1.21775 0.98594 0.81560 0.96452 0.87484 1.45545 1.63215 1.04950 1.22579 1.18169 0.77588 0.83926 0.84679 1.90793 1.42815 1.87338 1.20373 1.19529 1.07999 0.92871 0.96860 1.20587 0.96894 0.97165 0.93950 1.19663 1.05476 0.89429 1.00878 1.18433 1.00284 0.84763 0.95519 1.41734 1.53533 1.04141 1.19353 1.21678 0.99798 0.96748 0.88297 1.20758 1.09073 0.91426 0.98668 1.24413 0.83495 1.11219 0.95446 1.86538 1.17717 1.74257 1.55918 0.95347 0.81692 0.77095 0.87011 1.18924 1.04200 0.93002 0.94645 1.20699 0.92752 0.88931 0.98809 1.23406 0.95520 0.98700 1.00133 0.91831 0.91800 0.87932 0.87261 0.87265 0.90574 0.88949 0.76434 0.85445 0.85438 0.74114 0.80450 0.87014 0.77663 1.18096 1.17839 0.84380 0.88113 0.90321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.57 -39.26 -0.41 -0.90 16 3 C 0.46 0.68 7.96 36.00 0.29 0.96 16 4 O -0.50 -2.23 15.51 -18.75 -0.29 -2.52 16 5 C -0.11 0.20 5.65 -27.88 -0.16 0.05 16 6 C -0.10 0.14 3.03 -89.80 -0.27 -0.13 16 7 H 0.10 -0.05 7.68 -51.93 -0.40 -0.45 16 8 C -0.15 -0.02 7.43 -25.91 -0.19 -0.22 16 9 C 0.12 0.04 4.32 -67.12 -0.29 -0.25 16 10 H 0.11 0.20 7.46 -51.93 -0.39 -0.18 16 11 N -0.71 -0.60 5.21 -54.02 -0.28 -0.88 16 12 C 0.57 2.31 7.76 -12.42 -0.10 2.22 16 13 O -0.54 -4.22 15.93 5.30 0.08 -4.14 16 14 C -0.17 -0.49 5.87 -104.97 -0.62 -1.11 16 15 C -0.07 -0.02 9.46 -39.53 -0.37 -0.39 16 16 C -0.13 0.02 10.00 -39.85 -0.40 -0.38 16 17 C 0.12 0.11 7.27 -83.95 -0.61 -0.50 16 18 N -0.59 1.06 6.05 -10.61 -0.06 0.99 16 19 C 0.06 -0.11 10.43 -16.73 -0.17 -0.29 16 20 C -0.19 -0.15 5.58 -102.69 -0.57 -0.73 16 21 C -0.03 -0.02 3.06 36.00 0.11 0.09 16 22 O -0.54 -0.75 12.88 -35.23 -0.45 -1.20 16 23 Si 0.69 -0.90 30.76 -169.99 -5.23 -6.13 16 24 C -0.10 -0.28 6.34 -105.15 -0.67 -0.95 16 25 C 0.01 0.03 9.64 -38.86 -0.37 -0.34 16 26 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.36 7.84 -51.92 -0.41 -0.77 16 31 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.08 0.18 8.14 -51.93 -0.42 -0.25 16 33 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 34 H 0.40 -0.64 6.70 -40.82 -0.27 -0.91 16 35 H 0.13 -0.32 6.36 -52.49 -0.33 -0.66 16 36 H 0.13 -0.33 8.06 -52.49 -0.42 -0.76 16 37 H 0.42 -2.06 8.96 -40.82 -0.37 -2.43 16 38 H 0.18 -0.99 6.35 -52.49 -0.33 -1.32 16 39 H 0.11 0.21 7.96 -51.93 -0.41 -0.20 16 40 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 41 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 42 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 43 H 0.14 0.70 7.64 -52.49 -0.40 0.30 16 44 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 45 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 LS Contribution 381.42 15.07 5.75 5.75 Total: 0.00 -12.18 381.42 -10.33 -22.51 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -5.90 Total: -12.70 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -3.53 Total: -0.78 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.35 Total: 0.12 kcal Atomic # 8 Polarization: -7.69 SS G_CDS: -1.07 Total: -8.76 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.23 Total: -6.13 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -12.18 -10.33 -22.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_13287722.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.625 kcal (2) G-P(sol) polarization free energy of solvation -12.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.801 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.132 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds