Wall clock time and date at job start Sun Mar 7 2021 08:09:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99921 * 2 1 4 4 O 1.20827 * 120.00187 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99954 * 179.97438 * 3 2 1 6 6 C 1.53002 * 109.47194 * 180.02562 * 5 3 2 7 7 H 1.09001 * 112.85134 * 316.20058 * 6 5 3 8 8 C 1.54054 * 113.69655 * 87.46519 * 6 5 3 9 9 C 1.53778 * 86.98833 * 139.99225 * 8 6 5 10 10 H 1.08993 * 113.62063 * 219.98392 * 9 8 6 11 11 N 1.46504 * 113.61620 * 89.16000 * 9 8 6 12 12 C 1.34770 * 119.99810 * 105.86048 * 11 9 8 13 13 O 1.21594 * 120.00253 * 0.02562 * 12 11 9 14 14 C 1.47532 * 120.00092 * 180.02562 * 12 11 9 15 15 C 1.40140 * 120.19591 * 180.02562 * 14 12 11 16 16 O 1.35655 * 120.14689 * 0.02562 * 15 14 12 17 17 C 1.38702 * 119.70512 * 179.72832 * 15 14 12 18 18 C 1.50696 * 119.96120 * 180.25417 * 17 15 14 19 19 O 1.42895 * 109.47102 * 74.99977 * 18 17 15 20 20 Si 1.86309 * 109.47221 * 195.00124 * 18 17 15 21 21 C 1.38063 * 120.08323 * 0.23081 * 17 15 14 22 22 C 1.38550 * 120.38747 * 0.02562 * 21 17 15 23 23 C 1.50700 * 119.84648 * 179.97438 * 22 21 17 24 24 C 1.37789 * 120.30231 * 359.97438 * 22 21 17 25 25 C 1.53778 * 113.61705 * 184.99981 * 6 5 3 26 26 H 1.09006 * 109.47017 * 179.97438 * 1 2 3 27 27 H 1.08993 * 109.47152 * 299.99734 * 1 2 3 28 28 H 1.08996 * 109.46952 * 60.00471 * 1 2 3 29 29 H 1.08997 * 109.47213 * 60.00142 * 5 3 2 30 30 H 1.09001 * 109.47324 * 299.99911 * 5 3 2 31 31 H 1.09004 * 113.61179 * 25.48777 * 8 6 5 32 32 H 1.09006 * 113.69698 * 254.51018 * 8 6 5 33 33 H 0.96997 * 120.00139 * 285.87338 * 11 9 8 34 34 H 0.96700 * 114.00230 * 269.72493 * 16 15 14 35 35 H 1.08999 * 109.47090 * 314.99524 * 18 17 15 36 36 H 0.96700 * 113.99724 * 180.02562 * 19 18 17 37 37 H 1.48501 * 109.99855 * 178.68114 * 20 18 17 38 38 H 1.48504 * 109.99672 * 299.99640 * 20 18 17 39 39 H 1.07998 * 119.80690 * 180.02562 * 21 17 15 40 40 H 1.08991 * 109.47352 * 90.00062 * 23 22 21 41 41 H 1.09006 * 109.46686 * 209.99997 * 23 22 21 42 42 H 1.08998 * 109.47437 * 329.99564 * 23 22 21 43 43 H 1.07997 * 120.04636 * 180.02562 * 24 22 21 44 44 H 1.09001 * 113.61533 * 105.38731 * 25 6 5 45 45 H 1.08995 * 113.61579 * 334.48494 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 0.0011 7 1 3.4252 3.3538 -0.6942 8 6 4.1153 3.3532 1.4106 9 6 5.3807 4.0685 0.9087 10 1 6.1871 4.0949 1.6415 11 7 5.1153 5.3779 0.3075 12 6 5.4285 6.5036 0.9791 13 8 5.9317 6.4325 2.0837 14 6 5.1607 7.8222 0.3740 15 6 5.4852 8.9954 1.0684 16 8 6.0478 8.9241 2.3007 17 6 5.2342 10.2297 0.4876 18 6 5.5862 11.4948 1.2268 19 8 7.0010 11.6917 1.1872 20 14 4.7349 12.9426 0.4203 21 6 4.6628 10.3006 -0.7673 22 6 4.3357 9.1432 -1.4548 23 6 3.7119 9.2348 -2.8236 24 6 4.5780 7.9086 -0.8929 25 6 5.5209 2.9349 -0.1211 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5137 -0.8900 29 1 3.9564 0.7806 -0.8891 30 1 3.9557 0.7810 0.8908 31 1 4.3101 2.6174 2.1908 32 1 3.3004 4.0322 1.6616 33 1 4.7140 5.4346 -0.5737 34 1 5.4076 8.9126 3.0254 35 1 5.2595 11.4128 2.2634 36 1 7.2999 12.4893 1.6450 37 1 5.0484 14.1921 1.1591 38 1 5.1718 13.0654 -0.9937 39 1 4.4698 11.2641 -1.2155 40 1 4.4962 9.2462 -3.5803 41 1 3.0631 8.3740 -2.9856 42 1 3.1250 10.1505 -2.8949 43 1 4.3217 7.0091 -1.4327 44 1 5.8400 3.2765 -1.1057 45 1 6.0993 2.0851 0.2411 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_13422088.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:02 Heat of formation + Delta-G solvation = -138.274556 kcal Electronic energy + Delta-G solvation = -28976.438776 eV Core-core repulsion = 24733.977594 eV Total energy + Delta-G solvation = -4242.461182 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.86994 -41.46713 -40.56037 -39.05582 -37.96965 -37.62074 -37.37454 -34.68589 -33.19403 -32.83473 -31.34935 -28.48568 -27.62688 -26.79983 -26.76037 -25.63686 -24.13355 -21.95917 -21.73320 -21.57293 -20.25213 -19.41992 -18.56620 -18.52339 -18.29491 -17.64583 -17.57635 -17.47757 -16.67029 -16.62982 -16.04180 -15.89149 -15.63640 -15.44735 -15.07854 -14.92977 -14.80673 -14.66796 -14.56465 -14.09634 -14.05746 -13.75791 -13.65568 -13.42532 -13.17649 -13.01358 -13.00507 -12.81803 -12.67888 -12.38296 -12.18437 -11.80431 -11.78553 -11.71256 -11.60570 -11.36127 -11.29604 -10.73931 -10.43002 -10.14268 -9.95442 -9.47616 -5.03287 -0.27966 0.10298 1.20332 1.22990 1.52438 1.72739 1.80850 1.88799 2.08430 2.60949 3.17968 3.31826 3.35059 3.38152 3.58624 3.61433 3.66494 3.77734 3.78635 3.86458 4.05567 4.11877 4.15698 4.22280 4.27083 4.28519 4.34061 4.38353 4.42539 4.58229 4.58973 4.63030 4.64150 4.65889 4.73777 4.80955 4.97146 4.99900 5.00708 5.03490 5.13253 5.23070 5.36190 5.42476 5.58381 5.63113 6.46829 6.50392 6.76061 6.80233 7.28500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.505 6.505 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.101 0.899 8 C -0.146 4.146 9 C 0.122 3.878 10 H 0.106 0.894 11 N -0.711 5.711 12 C 0.564 3.436 13 O -0.516 6.516 14 C -0.165 4.165 15 C 0.191 3.809 16 O -0.468 6.468 17 C -0.106 4.106 18 C -0.067 4.067 19 O -0.527 6.527 20 Si 0.685 3.315 21 C -0.075 4.075 22 C -0.097 4.097 23 C -0.117 4.117 24 C -0.066 4.066 25 C -0.140 4.140 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.109 0.891 30 H 0.109 0.891 31 H 0.092 0.908 32 H 0.076 0.924 33 H 0.399 0.601 34 H 0.393 0.607 35 H 0.075 0.925 36 H 0.379 0.621 37 H -0.259 1.259 38 H -0.253 1.253 39 H 0.136 0.864 40 H 0.074 0.926 41 H 0.071 0.929 42 H 0.072 0.928 43 H 0.131 0.869 44 H 0.078 0.922 45 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.504 -1.762 -2.908 5.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.392 6.392 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.185 4.185 9 C 0.017 3.983 10 H 0.124 0.876 11 N -0.364 5.364 12 C 0.351 3.649 13 O -0.392 6.392 14 C -0.168 4.168 15 C 0.144 3.856 16 O -0.278 6.278 17 C -0.107 4.107 18 C -0.176 4.176 19 O -0.334 6.334 20 Si 0.586 3.414 21 C -0.093 4.093 22 C -0.097 4.097 23 C -0.173 4.173 24 C -0.085 4.085 25 C -0.178 4.178 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.127 0.873 30 H 0.127 0.873 31 H 0.111 0.889 32 H 0.094 0.906 33 H 0.235 0.765 34 H 0.251 0.749 35 H 0.092 0.908 36 H 0.227 0.773 37 H -0.184 1.184 38 H -0.178 1.178 39 H 0.154 0.846 40 H 0.093 0.907 41 H 0.090 0.910 42 H 0.091 0.909 43 H 0.149 0.851 44 H 0.097 0.903 45 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -3.768 -1.312 -3.126 5.069 hybrid contribution 0.224 0.228 0.318 0.451 sum -3.545 -1.085 -2.808 4.650 Atomic orbital electron populations 1.23294 0.75989 1.03928 1.02658 1.86512 1.23756 1.33573 1.84056 1.23851 0.92331 0.81362 0.72288 1.90683 1.67266 1.36323 1.44953 1.21454 0.87506 0.99151 1.06171 1.22578 0.96292 0.93939 0.99292 0.88039 1.23566 0.98573 1.00054 0.96262 1.21776 0.98614 0.81475 0.96463 0.87563 1.45566 1.64545 1.04954 1.21317 1.17998 0.78096 0.83582 0.85221 1.90833 1.42004 1.87076 1.19249 1.20325 1.06008 0.93324 0.97169 1.18207 0.90335 0.89726 0.87331 1.84803 1.34616 1.95706 1.12708 1.19595 1.01643 0.93389 0.96093 1.24635 0.86835 1.02599 1.03547 1.86650 1.19661 1.47877 1.79255 0.95209 0.90156 0.76201 0.79840 1.21118 0.96461 0.98967 0.92760 1.19770 1.00347 0.92198 0.97416 1.20834 1.00598 1.03504 0.92380 1.21124 0.96186 0.97858 0.93341 1.23402 0.95600 0.98647 1.00117 0.87931 0.91786 0.91811 0.87252 0.87255 0.88927 0.90567 0.76510 0.74872 0.90751 0.77323 1.18397 1.17819 0.84648 0.90712 0.90961 0.90885 0.85117 0.90324 0.88049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.25 -0.41 -0.77 16 3 C 0.46 0.48 7.96 36.01 0.29 0.77 16 4 O -0.50 -1.97 15.51 -18.75 -0.29 -2.26 16 5 C -0.11 0.24 5.65 -27.88 -0.16 0.09 16 6 C -0.10 0.19 3.04 -89.66 -0.27 -0.08 16 7 H 0.10 -0.10 7.68 -51.93 -0.40 -0.50 16 8 C -0.15 0.07 7.45 -25.78 -0.19 -0.12 16 9 C 0.12 -0.02 4.30 -67.11 -0.29 -0.31 16 10 H 0.11 0.17 7.50 -51.93 -0.39 -0.22 16 11 N -0.71 -0.27 5.21 -54.06 -0.28 -0.55 16 12 C 0.56 1.99 7.76 -12.47 -0.10 1.89 16 13 O -0.52 -3.62 14.78 -16.60 -0.25 -3.86 16 14 C -0.16 -0.41 5.89 -104.84 -0.62 -1.03 16 15 C 0.19 0.64 6.69 -38.70 -0.26 0.38 16 16 O -0.47 -1.92 10.91 -40.54 -0.44 -2.36 16 17 C -0.11 -0.21 5.30 -104.52 -0.55 -0.76 16 18 C -0.07 -0.05 2.37 36.00 0.09 0.04 16 19 O -0.53 -1.45 12.86 -35.23 -0.45 -1.90 16 20 Si 0.68 -0.66 30.19 -169.99 -5.13 -5.79 16 21 C -0.08 -0.04 8.30 -39.53 -0.33 -0.37 16 22 C -0.10 0.03 5.87 -104.67 -0.61 -0.59 16 23 C -0.12 0.30 10.00 36.01 0.36 0.66 16 24 C -0.07 0.00 9.18 -39.20 -0.36 -0.36 16 25 C -0.14 0.38 7.38 -25.92 -0.19 0.19 16 26 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 30 H 0.11 -0.40 7.85 -51.93 -0.41 -0.81 16 31 H 0.09 -0.12 7.91 -51.93 -0.41 -0.53 16 32 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 33 H 0.40 -0.79 6.73 -40.82 -0.27 -1.07 16 34 H 0.39 0.05 9.06 45.56 0.41 0.46 16 35 H 0.07 -0.07 7.83 -51.93 -0.41 -0.47 16 36 H 0.38 -0.54 8.74 45.56 0.40 -0.14 16 37 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 38 H -0.25 -0.40 6.74 56.52 0.38 -0.02 16 39 H 0.14 -0.12 4.87 -52.49 -0.26 -0.38 16 40 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 42 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 43 H 0.13 -0.37 6.40 -52.49 -0.34 -0.70 16 44 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 LS Contribution 377.39 15.07 5.69 5.69 Total: 0.00 -11.70 377.39 -9.21 -20.92 By element: Atomic # 1 Polarization: -5.03 SS G_CDS: -5.50 Total: -10.54 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -2.13 Total: 1.42 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.28 Total: -0.55 kcal Atomic # 8 Polarization: -9.30 SS G_CDS: -1.85 Total: -11.15 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.13 Total: -5.79 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -11.70 -9.21 -20.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_13422088.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.359 kcal (2) G-P(sol) polarization free energy of solvation -11.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.275 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds