Wall clock time and date at job start Sun Mar 7 2021 08:09:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34219 * 117.00276 * 2 1 4 4 O 1.20832 * 120.00160 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99987 * 179.97438 * 3 2 1 6 6 C 1.53007 * 109.47112 * 179.97438 * 5 3 2 7 7 H 1.09003 * 112.90568 * 43.74612 * 6 5 3 8 8 C 1.53781 * 113.61298 * 174.99846 * 6 5 3 9 9 C 1.53782 * 87.07931 * 139.97941 * 8 6 5 10 10 H 1.08997 * 113.61800 * 219.93566 * 9 8 6 11 11 N 1.46499 * 113.61283 * 89.11593 * 9 8 6 12 12 C 1.34781 * 120.00014 * 155.00196 * 11 9 8 13 13 O 1.21614 * 119.99902 * 359.97438 * 12 11 9 14 14 C 1.47381 * 119.99907 * 179.97438 * 12 11 9 15 15 C 1.36411 * 127.19344 * 0.02574 * 14 12 11 16 16 O 1.33654 * 108.39641 * 179.97438 * 15 14 12 17 17 C 1.34215 * 110.90763 * 0.02562 * 16 15 14 18 18 C 1.50699 * 125.43616 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.46964 * 120.02048 * 18 17 16 20 20 Si 1.86301 * 109.47146 * 0.02562 * 18 17 16 21 21 C 1.34174 * 109.12559 * 0.26015 * 17 16 15 22 22 C 1.53780 * 113.61320 * 272.49907 * 6 5 3 23 23 H 1.09003 * 109.46792 * 60.00347 * 1 2 3 24 24 H 1.08993 * 109.47418 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47292 * 300.00781 * 1 2 3 26 26 H 1.08996 * 109.46774 * 59.99964 * 5 3 2 27 27 H 1.09004 * 109.47000 * 299.99404 * 5 3 2 28 28 H 1.09005 * 113.61234 * 25.43159 * 8 6 5 29 29 H 1.08995 * 113.68708 * 254.53913 * 8 6 5 30 30 H 0.96996 * 120.00485 * 334.99724 * 11 9 8 31 31 H 1.08003 * 125.80412 * 359.97438 * 15 14 12 32 32 H 1.09002 * 109.46959 * 240.02019 * 18 17 16 33 33 H 0.96698 * 113.99898 * 299.99550 * 19 18 17 34 34 H 1.48503 * 110.00152 * 180.02562 * 20 18 17 35 35 H 1.48498 * 110.00118 * 301.32243 * 20 18 17 36 36 H 1.08001 * 127.02583 * 179.74243 * 21 17 16 37 37 H 1.08991 * 113.61743 * 105.47139 * 22 6 5 38 38 H 1.09002 * 113.60952 * 334.56547 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 0.0006 6 6 4.0003 2.7419 -0.0002 7 1 3.4248 3.3549 0.6935 8 6 5.5210 2.9346 0.1232 9 6 5.3821 4.0663 -0.9088 10 1 6.1892 4.0911 -1.6409 11 7 5.1163 5.3768 -0.3104 12 6 5.4586 6.5009 -0.9705 13 8 5.9885 6.4273 -2.0626 14 6 5.1907 7.8194 -0.3687 15 6 4.6085 8.0717 0.8388 16 8 4.5504 9.3959 1.0106 17 6 5.0748 10.0391 -0.0442 18 6 5.1762 11.5353 -0.1931 19 8 6.5485 11.9080 -0.3338 20 14 4.4605 12.3596 1.3165 21 6 5.4896 9.1376 -0.9472 22 6 4.1167 3.3491 -1.4082 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5140 0.8899 26 1 3.9564 0.7804 -0.8891 27 1 3.9558 0.7808 0.8909 28 1 6.0996 2.0839 -0.2369 29 1 5.8405 3.2778 1.1071 30 1 4.6939 5.4356 0.5608 31 1 4.2547 7.3279 1.5374 32 1 4.6216 11.8509 -1.0769 33 1 7.1030 11.6579 0.4179 34 1 4.5539 13.8355 1.1818 35 1 3.0426 11.9549 1.4921 36 1 5.9514 9.3389 -1.9025 37 1 3.3013 4.0271 -1.6602 38 1 4.3114 2.6117 -2.1870 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:20 Heat of formation + Delta-G solvation = -105.802843 kcal Electronic energy + Delta-G solvation = -23195.246739 eV Core-core repulsion = 19393.495014 eV Total energy + Delta-G solvation = -3801.751724 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.118 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.72295 -41.73509 -40.92040 -39.24144 -38.05310 -37.41849 -34.78626 -33.81726 -32.07298 -31.26508 -28.51552 -26.83614 -26.78977 -25.55807 -24.07640 -22.27378 -21.88935 -21.15248 -20.28688 -19.35898 -18.56999 -17.83569 -17.76548 -17.55263 -17.50590 -17.26765 -16.93350 -16.18926 -15.98607 -15.70597 -15.60607 -15.17908 -14.84157 -14.62969 -14.20995 -14.11124 -13.97395 -13.72977 -13.57085 -13.46247 -13.03240 -12.87441 -12.83153 -12.22883 -12.14344 -11.80593 -11.73412 -11.39350 -11.35060 -11.04435 -10.87581 -10.67171 -10.11502 -9.80122 -5.08049 0.22628 0.89532 1.12000 1.20655 1.44809 1.70590 1.77028 1.90109 2.01243 2.34060 3.18828 3.30431 3.34241 3.39772 3.57748 3.61767 3.73081 3.83136 3.91402 4.14087 4.20406 4.23619 4.24719 4.29915 4.35663 4.39471 4.55980 4.58453 4.60443 4.62258 4.74636 4.80406 4.95810 5.00266 5.08206 5.22684 5.40290 5.52744 5.82558 6.37267 6.42765 6.73734 7.20356 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.506 6.506 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.139 4.139 9 C 0.122 3.878 10 H 0.108 0.892 11 N -0.711 5.711 12 C 0.591 3.409 13 O -0.529 6.529 14 C -0.237 4.237 15 C 0.032 3.968 16 O -0.165 6.165 17 C -0.059 4.059 18 C -0.029 4.029 19 O -0.529 6.529 20 Si 0.707 3.293 21 C -0.123 4.123 22 C -0.147 4.147 23 H 0.063 0.937 24 H 0.103 0.897 25 H 0.063 0.937 26 H 0.110 0.890 27 H 0.110 0.890 28 H 0.101 0.899 29 H 0.079 0.921 30 H 0.399 0.601 31 H 0.214 0.786 32 H 0.133 0.867 33 H 0.384 0.616 34 H -0.247 1.247 35 H -0.253 1.253 36 H 0.162 0.838 37 H 0.076 0.924 38 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.397 -3.558 5.833 6.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.393 6.393 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.177 4.177 9 C 0.016 3.984 10 H 0.126 0.874 11 N -0.362 5.362 12 C 0.379 3.621 13 O -0.406 6.406 14 C -0.242 4.242 15 C -0.038 4.038 16 O -0.061 6.061 17 C -0.107 4.107 18 C -0.139 4.139 19 O -0.335 6.335 20 Si 0.606 3.394 21 C -0.142 4.142 22 C -0.186 4.186 23 H 0.082 0.918 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.128 0.872 27 H 0.128 0.872 28 H 0.120 0.880 29 H 0.097 0.903 30 H 0.233 0.767 31 H 0.230 0.770 32 H 0.150 0.850 33 H 0.232 0.768 34 H -0.171 1.171 35 H -0.177 1.177 36 H 0.180 0.820 37 H 0.094 0.906 38 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.391 -2.363 5.010 5.553 hybrid contribution -0.595 -0.589 -0.296 0.888 sum -0.986 -2.951 4.714 5.648 Atomic orbital electron populations 1.23297 0.75962 1.03946 1.02665 1.86509 1.23772 1.33555 1.84033 1.23853 0.92340 0.81368 0.72282 1.90686 1.67285 1.36337 1.44982 1.21457 0.87506 0.99115 1.06201 1.22537 0.96321 0.94011 0.99254 0.88030 1.23407 0.95575 0.98628 1.00072 1.21799 0.98725 0.81300 0.96545 0.87390 1.45479 1.63272 1.05018 1.22414 1.17251 0.77682 0.82632 0.84534 1.90821 1.42465 1.87107 1.20161 1.21506 1.10705 0.94551 0.97436 1.24471 0.99117 0.82693 0.97532 1.83686 1.63606 1.18378 1.40474 1.22744 1.04262 0.96110 0.87574 1.24449 0.89139 0.87891 1.12429 1.86578 1.17724 1.81257 1.47927 0.94271 0.82704 0.79849 0.82548 1.22536 1.01993 0.88903 1.00812 1.23532 0.98564 1.00119 0.96369 0.91789 0.87906 0.91806 0.87235 0.87216 0.88011 0.90263 0.76684 0.76989 0.84970 0.76799 1.17146 1.17739 0.82014 0.90563 0.88846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.32 10.56 -39.23 -0.41 -0.73 16 3 C 0.46 0.41 7.96 36.01 0.29 0.70 16 4 O -0.51 -1.94 15.51 -18.75 -0.29 -2.23 16 5 C -0.11 0.28 5.65 -27.88 -0.16 0.12 16 6 C -0.10 0.24 3.03 -89.80 -0.27 -0.03 16 7 H 0.10 -0.16 7.68 -51.93 -0.40 -0.56 16 8 C -0.14 0.48 7.39 -25.92 -0.19 0.29 16 9 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 11 N -0.71 0.43 5.25 -54.10 -0.28 0.15 16 12 C 0.59 1.69 7.81 -12.54 -0.10 1.59 16 13 O -0.53 -3.76 16.58 5.27 0.09 -3.67 16 14 C -0.24 -0.35 6.31 -103.28 -0.65 -1.00 16 15 C 0.03 -0.05 11.61 30.07 0.35 0.30 16 16 O -0.17 0.04 8.89 7.65 0.07 0.11 16 17 C -0.06 -0.03 6.20 -35.74 -0.22 -0.25 16 18 C -0.03 0.02 2.97 36.01 0.11 0.12 16 19 O -0.53 0.17 12.87 -35.23 -0.45 -0.29 16 20 Si 0.71 -1.00 32.08 -169.99 -5.45 -6.45 16 21 C -0.12 -0.27 10.88 -37.45 -0.41 -0.68 16 22 C -0.15 0.11 7.43 -25.92 -0.19 -0.08 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.11 -0.43 7.84 -51.93 -0.41 -0.84 16 27 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 28 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 29 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 30 H 0.40 -1.41 7.67 -40.82 -0.31 -1.72 16 31 H 0.21 -1.27 7.47 -52.48 -0.39 -1.66 16 32 H 0.13 -0.09 7.96 -51.93 -0.41 -0.51 16 33 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 34 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 35 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 36 H 0.16 0.45 8.06 -52.49 -0.42 0.02 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.09 -0.14 7.89 -51.93 -0.41 -0.55 16 LS Contribution 335.75 15.07 5.06 5.06 Total: 0.00 -10.81 335.75 -7.26 -18.07 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -4.90 Total: -11.74 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -0.67 Total: 1.73 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.28 Total: 0.15 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.00 Total: -6.81 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.45 Total: -6.45 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -10.81 -7.26 -18.07 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.737 kcal (2) G-P(sol) polarization free energy of solvation -10.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.803 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds