Wall clock time and date at job start Sun Mar 7 2021 08:09:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99925 * 2 1 4 4 O 1.20827 * 119.99587 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99760 * 179.97438 * 3 2 1 6 6 C 1.53011 * 109.46576 * 180.02562 * 5 3 2 7 7 H 1.08992 * 112.84588 * 43.80896 * 6 5 3 8 8 C 1.53784 * 113.61072 * 175.00472 * 6 5 3 9 9 C 1.53776 * 87.08057 * 139.98267 * 8 6 5 10 10 H 1.09000 * 113.61096 * 219.93538 * 9 8 6 11 11 N 1.46500 * 113.61762 * 89.11560 * 9 8 6 12 12 C 1.34767 * 120.00153 * 154.99986 * 11 9 8 13 13 O 1.21286 * 120.00244 * 359.97438 * 12 11 9 14 14 C 1.50700 * 120.00118 * 180.02562 * 12 11 9 15 15 C 1.50702 * 109.47341 * 180.02562 * 14 12 11 16 16 C 1.34848 * 125.89174 * 85.01977 * 15 14 12 17 17 C 1.40895 * 107.41714 * 179.97438 * 16 15 14 18 18 C 1.34844 * 107.41841 * 0.02562 * 17 16 15 19 19 C 1.50693 * 125.89552 * 179.97438 * 18 17 16 20 20 O 1.42900 * 109.47424 * 120.02363 * 19 18 17 21 21 Si 1.86309 * 109.46815 * 0.02652 * 19 18 17 22 22 N 1.36345 * 125.88970 * 264.98187 * 15 14 12 23 23 C 1.53775 * 113.61452 * 272.49956 * 6 5 3 24 24 H 1.08999 * 109.47407 * 60.00049 * 1 2 3 25 25 H 1.09002 * 109.46580 * 179.97438 * 1 2 3 26 26 H 1.08992 * 109.47311 * 299.99961 * 1 2 3 27 27 H 1.08996 * 109.46767 * 60.00917 * 5 3 2 28 28 H 1.08993 * 109.47235 * 299.99922 * 5 3 2 29 29 H 1.09000 * 113.61437 * 25.43275 * 8 6 5 30 30 H 1.08997 * 113.68625 * 254.54492 * 8 6 5 31 31 H 0.96996 * 119.99641 * 334.99654 * 11 9 8 32 32 H 1.08994 * 109.47296 * 59.99724 * 14 12 11 33 33 H 1.09004 * 109.46775 * 299.99700 * 14 12 11 34 34 H 1.07999 * 126.29387 * 0.23472 * 16 15 14 35 35 H 1.07998 * 126.29109 * 180.02562 * 17 16 15 36 36 H 1.08997 * 109.47637 * 240.02507 * 19 18 17 37 37 H 0.96706 * 114.00118 * 300.00482 * 20 19 18 38 38 H 1.48504 * 109.99781 * 179.97438 * 21 19 18 39 39 H 1.48499 * 109.99826 * 301.31572 * 21 19 18 40 40 H 0.97003 * 125.63562 * 0.05442 * 22 15 14 41 41 H 1.08999 * 113.61626 * 105.47663 * 23 6 5 42 42 H 1.09006 * 113.61380 * 334.56902 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0001 2.7422 0.0011 7 1 3.4246 3.3533 0.6964 8 6 5.5208 2.9349 0.1244 9 6 5.3816 4.0675 -0.9064 10 1 6.1887 4.0930 -1.6386 11 7 5.1159 5.3775 -0.3068 12 6 5.4580 6.5021 -0.9658 13 8 5.9864 6.4298 -2.0551 14 6 5.1851 7.8497 -0.3487 15 6 5.6586 8.9345 -1.2814 16 6 4.9567 9.4570 -2.3074 17 6 5.7648 10.4384 -2.9148 18 6 6.9299 10.4780 -2.2371 19 6 8.0964 11.3835 -2.5374 20 8 8.3632 12.2091 -1.4019 21 14 7.6873 12.4576 -4.0037 22 7 6.8704 9.5576 -1.2329 23 6 4.1163 3.3507 -1.4063 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3632 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 3.9563 0.7807 -0.8892 28 1 3.9557 0.7809 0.8908 29 1 6.0994 2.0846 -0.2366 30 1 5.8404 3.2771 1.1087 31 1 4.6936 5.4353 0.5645 32 1 5.7154 7.9288 0.6003 33 1 4.1144 7.9605 -0.1770 34 1 3.9571 9.1777 -2.6059 35 1 5.4997 11.0472 -3.7665 36 1 8.9759 10.7805 -2.7629 37 1 7.6223 12.7743 -1.1437 38 1 8.8295 13.3559 -4.3097 39 1 7.3767 11.6103 -5.1830 40 1 7.5743 9.3755 -0.5907 41 1 3.3008 4.0288 -1.6576 42 1 4.3109 2.6140 -2.1858 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:28 Heat of formation + Delta-G solvation = -83.812334 kcal Electronic energy + Delta-G solvation = -24746.443718 eV Core-core repulsion = 20887.826617 eV Total energy + Delta-G solvation = -3858.617101 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.27394 -41.70970 -40.91647 -39.32498 -37.65464 -37.40893 -34.64606 -33.10963 -31.83126 -31.54353 -29.35841 -28.42391 -26.82922 -25.44231 -24.44514 -22.24262 -21.86910 -21.25881 -20.94189 -20.28151 -18.89390 -18.56738 -18.24957 -17.64620 -17.49768 -17.24515 -16.64412 -16.33533 -16.22437 -15.72090 -15.46329 -15.03709 -14.93691 -14.80418 -14.48121 -14.28036 -14.04477 -14.01653 -13.85819 -13.74114 -13.47392 -13.40161 -13.02900 -12.87518 -12.70508 -12.21027 -11.97811 -11.86311 -11.79848 -11.71750 -11.38403 -11.34271 -10.87884 -10.59031 -10.06974 -9.68161 -8.86378 -4.93805 1.18881 1.21264 1.30508 1.63234 1.71429 1.75148 1.93108 2.03195 2.28696 2.54106 3.31873 3.35388 3.47945 3.62380 3.64685 3.72845 3.83695 3.86203 3.95201 4.04491 4.14717 4.21071 4.25339 4.30508 4.38335 4.39663 4.47615 4.56582 4.60404 4.62364 4.62721 4.76582 4.85604 4.96417 5.00747 5.10500 5.35390 5.39161 5.40921 5.54958 6.08724 6.23310 6.43895 6.55042 6.69671 6.74335 7.23306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.505 6.505 5 C -0.106 4.106 6 C -0.102 4.102 7 H 0.102 0.898 8 C -0.140 4.140 9 C 0.121 3.879 10 H 0.105 0.895 11 N -0.715 5.715 12 C 0.514 3.486 13 O -0.522 6.522 14 C -0.072 4.072 15 C 0.036 3.964 16 C -0.172 4.172 17 C -0.188 4.188 18 C -0.010 4.010 19 C -0.050 4.050 20 O -0.547 6.547 21 Si 0.720 3.280 22 N -0.535 5.535 23 C -0.146 4.146 24 H 0.063 0.937 25 H 0.102 0.898 26 H 0.063 0.937 27 H 0.109 0.891 28 H 0.109 0.891 29 H 0.099 0.901 30 H 0.078 0.922 31 H 0.402 0.598 32 H 0.100 0.900 33 H 0.118 0.882 34 H 0.136 0.864 35 H 0.141 0.859 36 H 0.110 0.890 37 H 0.381 0.619 38 H -0.256 1.256 39 H -0.255 1.255 40 H 0.412 0.588 41 H 0.076 0.924 42 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.205 -1.954 4.554 5.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.392 6.392 5 C -0.143 4.143 6 C -0.120 4.120 7 H 0.120 0.880 8 C -0.178 4.178 9 C 0.015 3.985 10 H 0.123 0.877 11 N -0.368 5.368 12 C 0.300 3.700 13 O -0.396 6.396 14 C -0.112 4.112 15 C -0.078 4.078 16 C -0.197 4.197 17 C -0.213 4.213 18 C -0.124 4.124 19 C -0.160 4.160 20 O -0.352 6.352 21 Si 0.620 3.380 22 N -0.130 5.130 23 C -0.185 4.185 24 H 0.082 0.918 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.127 0.873 28 H 0.127 0.873 29 H 0.118 0.882 30 H 0.096 0.904 31 H 0.236 0.764 32 H 0.118 0.882 33 H 0.136 0.864 34 H 0.154 0.846 35 H 0.159 0.841 36 H 0.127 0.873 37 H 0.229 0.771 38 H -0.181 1.181 39 H -0.179 1.179 40 H 0.249 0.751 41 H 0.095 0.905 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.130 -1.797 2.993 3.669 hybrid contribution -0.026 -0.854 1.062 1.363 sum -1.156 -2.651 4.055 4.981 Atomic orbital electron populations 1.23298 0.75952 1.03947 1.02677 1.86511 1.23786 1.33564 1.84048 1.23842 0.92321 0.81372 0.72298 1.90684 1.67256 1.36331 1.44948 1.21457 0.87543 0.99167 1.06144 1.22525 0.96256 0.93966 0.99277 0.87958 1.23402 0.95646 0.98673 1.00066 1.21772 0.98578 0.81729 0.96408 0.87747 1.45667 1.63415 1.05032 1.22643 1.20620 0.78092 0.85657 0.85673 1.90772 1.41431 1.87190 1.20221 1.20130 1.04359 0.88982 0.97778 1.19465 0.87383 0.99399 1.01547 1.20593 1.00794 1.00690 0.97631 1.20649 0.93989 1.03720 1.02897 1.20815 0.98701 0.98149 0.94713 1.24842 0.96810 0.95125 0.99210 1.86476 1.43087 1.57165 1.48519 0.94132 0.86067 0.82524 0.75258 1.41779 1.14302 1.30265 1.26639 1.23513 0.98600 1.00096 0.96293 0.91778 0.87912 0.91790 0.87292 0.87272 0.88208 0.90367 0.76374 0.88165 0.86390 0.84584 0.84122 0.87263 0.77141 1.18099 1.17923 0.75112 0.90536 0.89022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.26 -0.41 -0.77 16 3 C 0.46 0.46 7.96 36.01 0.29 0.75 16 4 O -0.50 -1.95 15.51 -18.75 -0.29 -2.24 16 5 C -0.11 0.26 5.65 -27.88 -0.16 0.10 16 6 C -0.10 0.22 3.03 -89.80 -0.27 -0.05 16 7 H 0.10 -0.14 7.68 -51.93 -0.40 -0.54 16 8 C -0.14 0.45 7.39 -25.92 -0.19 0.26 16 9 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.10 0.12 7.46 -51.93 -0.39 -0.27 16 11 N -0.72 0.91 5.26 -53.02 -0.28 0.64 16 12 C 0.51 0.65 7.82 -10.99 -0.09 0.57 16 13 O -0.52 -3.18 15.63 5.55 0.09 -3.09 16 14 C -0.07 0.10 6.24 -29.03 -0.18 -0.09 16 15 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 16 C -0.17 -0.47 10.77 -39.78 -0.43 -0.90 16 17 C -0.19 -0.44 9.37 -39.78 -0.37 -0.81 16 18 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 19 C -0.05 -0.04 3.08 36.00 0.11 0.07 16 20 O -0.55 -0.35 12.88 -35.23 -0.45 -0.80 16 21 Si 0.72 -0.13 30.59 -169.99 -5.20 -5.33 16 22 N -0.54 -0.82 6.08 -5.44 -0.03 -0.85 16 23 C -0.15 0.10 7.43 -25.92 -0.19 -0.09 16 24 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 25 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.11 -0.40 7.84 -51.93 -0.41 -0.81 16 28 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 30 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 31 H 0.40 -1.56 8.70 -40.82 -0.36 -1.91 16 32 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 33 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.14 0.23 8.06 -52.49 -0.42 -0.19 16 35 H 0.14 0.08 6.22 -52.49 -0.33 -0.24 16 36 H 0.11 0.16 7.96 -51.93 -0.41 -0.25 16 37 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 38 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 39 H -0.25 -0.68 7.11 56.52 0.40 -0.27 16 40 H 0.41 -0.04 8.96 -40.82 -0.37 -0.41 16 41 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 42 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 LS Contribution 359.19 15.07 5.41 5.41 Total: 0.00 -11.07 359.19 -8.96 -20.03 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -6.09 Total: -12.49 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -1.70 Total: -0.51 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.31 Total: -0.22 kcal Atomic # 8 Polarization: -5.82 SS G_CDS: -1.07 Total: -6.89 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.20 Total: -5.33 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -11.07 -8.96 -20.03 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.781 kcal (2) G-P(sol) polarization free energy of solvation -11.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.031 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds