Wall clock time and date at job start Sun Mar 7 2021 08:09:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47248 * 180.02562 * 5 3 2 7 7 H 1.09006 * 112.85112 * 43.80614 * 6 5 3 8 8 C 1.53781 * 113.61412 * 174.99747 * 6 5 3 9 9 C 1.53784 * 87.07851 * 139.98212 * 8 6 5 10 10 H 1.09003 * 113.61078 * 220.01370 * 9 8 6 11 11 N 1.46504 * 113.61268 * 89.20168 * 9 8 6 12 12 C 1.34773 * 119.99562 * 154.99931 * 11 9 8 13 13 O 1.21281 * 120.00733 * 0.02562 * 12 11 9 14 14 C 1.50707 * 119.99597 * 179.97438 * 12 11 9 15 15 C 1.53047 * 109.32888 * 179.97438 * 14 12 11 16 16 C 1.53537 * 108.55928 * 169.83092 * 15 14 12 17 17 N 1.47027 * 107.66157 * 299.04837 * 16 15 14 18 18 C 1.38929 * 118.87947 * 43.66738 * 17 16 15 19 19 C 1.31107 * 121.84876 * 346.68275 * 18 17 16 20 20 C 1.50707 * 118.54556 * 180.42740 * 19 18 17 21 21 O 1.42905 * 109.47113 * 109.98174 * 20 19 18 22 22 Si 1.86292 * 109.47234 * 349.98066 * 20 19 18 23 23 C 1.53780 * 87.08263 * 334.56785 * 9 8 6 24 24 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 25 25 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 26 26 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 27 27 H 1.09008 * 109.47488 * 300.00148 * 5 3 2 28 28 H 1.09001 * 109.47517 * 59.99934 * 5 3 2 29 29 H 1.09001 * 113.61653 * 254.52936 * 8 6 5 30 30 H 1.08999 * 113.61469 * 25.43600 * 8 6 5 31 31 H 0.96998 * 120.00233 * 334.99613 * 11 9 8 32 32 H 1.08993 * 109.32774 * 60.35119 * 14 12 11 33 33 H 1.08998 * 109.62248 * 289.55574 * 15 14 12 34 34 H 1.09001 * 109.61981 * 50.10979 * 15 14 12 35 35 H 1.08998 * 109.82269 * 58.59281 * 16 15 14 36 36 H 1.09006 * 109.81774 * 179.51482 * 16 15 14 37 37 H 0.97001 * 120.56311 * 223.64585 * 17 16 15 38 38 H 1.08000 * 119.07385 * 166.68285 * 18 17 16 39 39 H 1.08999 * 109.47242 * 229.97688 * 20 19 18 40 40 H 0.96701 * 113.99963 * 299.99864 * 21 20 19 41 41 H 1.48497 * 110.00201 * 58.67847 * 22 20 19 42 42 H 1.48503 * 110.00188 * 180.02562 * 22 20 19 43 43 H 1.08999 * 113.61016 * 270.88809 * 23 9 8 44 44 H 1.08996 * 113.61204 * 139.98404 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4252 3.3531 0.6962 8 6 5.5209 2.9347 0.1225 9 6 5.3810 4.0677 -0.9078 10 1 6.1869 4.0927 -1.6414 11 7 5.1176 5.3778 -0.3073 12 6 5.4597 6.5023 -0.9667 13 8 5.9852 6.4299 -2.0574 14 6 5.1883 7.8500 -0.3493 15 6 5.6711 8.9489 -1.2989 16 6 5.1620 10.3014 -0.7803 17 7 3.6926 10.2522 -0.7738 18 6 3.0615 9.1106 -0.2957 19 6 3.7150 7.9921 -0.0935 20 6 2.9542 6.7959 0.4178 21 8 2.8607 5.8135 -0.6158 22 14 1.2425 7.3217 0.9314 23 6 4.1153 3.3512 -1.4072 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.9565 0.7806 0.8892 28 1 3.9557 0.7810 -0.8908 29 1 5.8399 3.2768 1.1071 30 1 6.0992 2.0846 -0.2392 31 1 4.6970 5.4359 0.5648 32 1 5.7256 7.9287 0.5957 33 1 6.7607 8.9546 -1.3282 34 1 5.2763 8.7681 -2.2987 35 1 5.5306 10.4719 0.2312 36 1 5.5022 11.1012 -1.4382 37 1 3.1725 11.0043 -1.0976 38 1 2.0029 9.1455 -0.0847 39 1 3.4769 6.3723 1.2754 40 1 2.4061 6.1219 -1.4116 41 1 0.5307 7.9300 -0.2212 42 1 0.4821 6.1511 1.4382 43 1 4.3094 2.6148 -2.1870 44 1 3.2996 4.0294 -1.6575 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_15608500.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:36 Heat of formation + Delta-G solvation = -86.014586 kcal Electronic energy + Delta-G solvation = -27717.261195 eV Core-core repulsion = 23831.237118 eV Total energy + Delta-G solvation = -3886.024077 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.161 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.73015 -41.24454 -39.95834 -38.63086 -37.62985 -37.25452 -34.30730 -33.33482 -32.71729 -31.30852 -28.42207 -27.31868 -26.56840 -26.02414 -24.21563 -23.24882 -21.80130 -21.67407 -20.03484 -19.35972 -18.98469 -18.42680 -17.95322 -17.51850 -17.42003 -17.26205 -16.67459 -16.39433 -15.91959 -15.65521 -15.39458 -15.16380 -15.03237 -14.80042 -14.59283 -14.40947 -13.96657 -13.84982 -13.76015 -13.36561 -13.28501 -13.06004 -12.89221 -12.71225 -12.49397 -12.11361 -11.95398 -11.86189 -11.69367 -11.57282 -11.46792 -11.40306 -11.16923 -11.05917 -10.46714 -10.31212 -9.53777 -8.51374 -4.89337 1.25054 1.34987 1.38454 1.62193 1.83096 2.01741 2.11141 2.47285 2.54696 3.45567 3.56098 3.62983 3.68247 3.78970 3.85732 3.97738 4.03001 4.08968 4.21519 4.24010 4.28212 4.28729 4.40391 4.44289 4.46030 4.55649 4.58366 4.60521 4.66062 4.73196 4.80822 4.82368 4.83837 5.03499 5.20166 5.26371 5.32909 5.38938 5.41524 5.52597 5.54255 5.92481 6.24637 6.56364 6.76840 6.87281 6.88149 7.60463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.364 6.364 3 C 0.457 3.543 4 O -0.500 6.500 5 C -0.106 4.106 6 C -0.097 4.097 7 H 0.103 0.897 8 C -0.143 4.143 9 C 0.127 3.873 10 H 0.097 0.903 11 N -0.686 5.686 12 C 0.534 3.466 13 O -0.551 6.551 14 C -0.039 4.039 15 C -0.119 4.119 16 C 0.119 3.881 17 N -0.748 5.748 18 C 0.152 3.848 19 C -0.279 4.279 20 C -0.055 4.055 21 O -0.515 6.515 22 Si 0.665 3.335 23 C -0.141 4.141 24 H 0.062 0.938 25 H 0.062 0.938 26 H 0.101 0.899 27 H 0.106 0.894 28 H 0.106 0.894 29 H 0.073 0.927 30 H 0.095 0.905 31 H 0.400 0.600 32 H 0.094 0.906 33 H 0.079 0.921 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.081 0.919 37 H 0.403 0.597 38 H 0.133 0.867 39 H 0.104 0.896 40 H 0.368 0.632 41 H -0.266 1.266 42 H -0.258 1.258 43 H 0.079 0.921 44 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.011 1.773 4.016 4.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.281 6.281 3 C 0.299 3.701 4 O -0.386 6.386 5 C -0.143 4.143 6 C -0.115 4.115 7 H 0.121 0.879 8 C -0.181 4.181 9 C 0.021 3.979 10 H 0.115 0.885 11 N -0.338 5.338 12 C 0.321 3.679 13 O -0.429 6.429 14 C -0.061 4.061 15 C -0.158 4.158 16 C -0.005 4.005 17 N -0.377 5.377 18 C 0.030 3.970 19 C -0.290 4.290 20 C -0.166 4.166 21 O -0.321 6.321 22 Si 0.568 3.432 23 C -0.180 4.180 24 H 0.081 0.919 25 H 0.081 0.919 26 H 0.120 0.880 27 H 0.124 0.876 28 H 0.124 0.876 29 H 0.092 0.908 30 H 0.113 0.887 31 H 0.238 0.762 32 H 0.112 0.888 33 H 0.098 0.902 34 H 0.097 0.903 35 H 0.081 0.919 36 H 0.100 0.900 37 H 0.237 0.763 38 H 0.150 0.850 39 H 0.122 0.878 40 H 0.216 0.784 41 H -0.192 1.192 42 H -0.183 1.183 43 H 0.097 0.903 44 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -0.241 1.556 3.580 3.911 hybrid contribution -0.740 -0.164 -0.813 1.112 sum -0.981 1.392 2.767 3.249 Atomic orbital electron populations 1.23263 0.76231 1.03773 1.02545 1.86513 1.23565 1.33795 1.84229 1.23893 0.92394 0.81312 0.72458 1.90700 1.67171 1.36191 1.44569 1.21485 0.87377 0.99674 1.05772 1.22462 0.95901 0.93223 0.99914 0.87874 1.23417 0.95827 0.98849 1.00037 1.21611 0.98125 0.82209 0.95945 0.88471 1.45695 1.61452 1.04383 1.22302 1.20311 0.76786 0.85686 0.85154 1.90685 1.43898 1.87524 1.20766 1.19695 0.94095 0.92638 0.99642 1.21710 1.01390 0.93137 0.99547 1.21657 0.80097 0.97707 1.01054 1.44602 1.06001 1.17183 1.69942 1.20516 0.96531 0.86604 0.93360 1.20552 0.95384 0.95390 1.17699 1.24619 1.08432 0.90181 0.93403 1.86833 1.79078 1.38867 1.27339 0.95574 0.76115 0.84603 0.86867 1.23483 0.99287 0.99673 0.95536 0.91929 0.91918 0.88032 0.87600 0.87575 0.90805 0.88658 0.76197 0.88813 0.90198 0.90312 0.91855 0.90009 0.76309 0.85003 0.87795 0.78425 1.19233 1.18332 0.90254 0.89307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.01 10.56 101.05 1.07 1.08 16 2 O -0.36 -0.82 10.57 -39.26 -0.41 -1.23 16 3 C 0.46 1.16 7.96 36.00 0.29 1.45 16 4 O -0.50 -2.75 15.51 -18.75 -0.29 -3.04 16 5 C -0.11 0.07 5.65 -27.88 -0.16 -0.08 16 6 C -0.10 0.01 3.03 -89.81 -0.27 -0.26 16 7 H 0.10 0.14 7.68 -51.93 -0.40 -0.25 16 8 C -0.14 0.18 7.39 -25.92 -0.19 -0.01 16 9 C 0.13 0.13 4.32 -67.11 -0.29 -0.16 16 10 H 0.10 0.28 7.46 -51.93 -0.39 -0.11 16 11 N -0.69 -0.58 3.07 -53.01 -0.16 -0.74 16 12 C 0.53 1.51 6.39 -10.98 -0.07 1.44 16 13 O -0.55 -3.82 15.40 5.56 0.09 -3.73 16 14 C -0.04 -0.01 2.75 -93.14 -0.26 -0.27 16 15 C -0.12 -0.05 4.91 -26.43 -0.13 -0.18 16 16 C 0.12 -0.22 7.16 -3.48 -0.02 -0.24 16 17 N -0.75 1.34 5.83 -60.68 -0.35 0.99 16 18 C 0.15 -0.18 9.62 -16.08 -0.15 -0.34 16 19 C -0.28 0.20 5.15 -101.33 -0.52 -0.32 16 20 C -0.06 0.06 1.73 36.01 0.06 0.12 16 21 O -0.52 -0.32 6.84 -35.23 -0.24 -0.56 16 22 Si 0.67 -0.50 29.95 -169.99 -5.09 -5.59 16 23 C -0.14 -0.16 7.07 -25.92 -0.18 -0.34 16 24 H 0.06 0.04 8.13 -51.93 -0.42 -0.38 16 25 H 0.06 0.03 8.13 -51.93 -0.42 -0.39 16 26 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 27 H 0.11 -0.25 8.14 -51.92 -0.42 -0.67 16 28 H 0.11 -0.21 7.84 -51.93 -0.41 -0.62 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 31 H 0.40 -0.22 5.55 -40.82 -0.23 -0.44 16 32 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 0.23 7.77 -51.93 -0.40 -0.17 16 35 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.40 -1.37 8.96 -40.82 -0.37 -1.74 16 38 H 0.13 -0.29 4.30 -52.49 -0.23 -0.52 16 39 H 0.10 -0.24 6.39 -51.93 -0.33 -0.57 16 40 H 0.37 0.04 8.70 45.56 0.40 0.44 16 41 H -0.27 -0.39 6.84 56.52 0.39 -0.01 16 42 H -0.26 -0.94 7.11 56.52 0.40 -0.54 16 43 H 0.08 0.05 7.90 -51.93 -0.41 -0.36 16 44 H 0.09 0.26 5.86 -51.93 -0.30 -0.04 16 LS Contribution 344.54 15.07 5.19 5.19 Total: 0.00 -8.56 344.54 -8.61 -17.17 By element: Atomic # 1 Polarization: -3.83 SS G_CDS: -6.50 Total: -10.33 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -0.84 Total: 1.88 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.52 Total: 0.25 kcal Atomic # 8 Polarization: -7.70 SS G_CDS: -0.86 Total: -8.56 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.09 Total: -5.59 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -8.56 -8.61 -17.17 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_15608500.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.842 kcal (2) G-P(sol) polarization free energy of solvation -8.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.015 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds