Wall clock time and date at job start Sun Mar 7 2021 08:09:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34228 * 117.00317 * 2 1 4 4 O 1.20832 * 119.99983 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00522 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.47423 * 179.97438 * 5 3 2 7 7 H 1.09004 * 112.90092 * 43.75067 * 6 5 3 8 8 C 1.53778 * 113.61263 * 174.99752 * 6 5 3 9 9 C 1.53787 * 87.08035 * 139.98349 * 8 6 5 10 10 H 1.08994 * 113.61447 * 220.02014 * 9 8 6 11 11 N 1.46496 * 113.61210 * 89.11438 * 9 8 6 12 12 C 1.34774 * 120.00099 * 155.00440 * 11 9 8 13 13 O 1.21282 * 120.00036 * 359.97438 * 12 11 9 14 14 C 1.50698 * 120.00600 * 180.02562 * 12 11 9 15 15 C 1.52994 * 109.47425 * 179.97438 * 14 12 11 16 16 O 1.42903 * 109.47325 * 180.02562 * 15 14 12 17 17 C 1.35903 * 117.00471 * 180.02562 * 16 15 14 18 18 C 1.38706 * 120.05578 * 179.72572 * 17 16 15 19 19 C 1.38172 * 119.94169 * 179.72278 * 18 17 16 20 20 C 1.50700 * 119.97339 * 180.27349 * 19 18 17 21 21 O 1.42897 * 109.47032 * 300.25240 * 20 19 18 22 22 Si 1.86303 * 109.47156 * 180.25264 * 20 19 18 23 23 C 1.38245 * 120.04980 * 0.52847 * 19 18 17 24 24 C 1.38283 * 120.11755 * 359.76698 * 23 19 18 25 25 C 1.38126 * 120.05243 * 359.95719 * 24 23 19 26 26 C 1.53778 * 113.61526 * 272.49838 * 6 5 3 27 27 H 1.08998 * 109.47251 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47375 * 300.00230 * 1 2 3 29 29 H 1.08999 * 109.47133 * 60.00213 * 1 2 3 30 30 H 1.09008 * 109.47032 * 59.99670 * 5 3 2 31 31 H 1.09000 * 109.47211 * 299.99648 * 5 3 2 32 32 H 1.08998 * 113.61879 * 25.43831 * 8 6 5 33 33 H 1.08997 * 113.69304 * 254.53918 * 8 6 5 34 34 H 0.97002 * 120.00490 * 335.00104 * 11 9 8 35 35 H 1.09005 * 109.46821 * 300.00153 * 14 12 11 36 36 H 1.09008 * 109.47008 * 59.99541 * 14 12 11 37 37 H 1.08998 * 109.47410 * 299.99589 * 15 14 12 38 38 H 1.08997 * 109.47537 * 60.00290 * 15 14 12 39 39 H 1.07997 * 120.02979 * 359.97438 * 18 17 16 40 40 H 1.09004 * 109.46996 * 60.25597 * 20 19 18 41 41 H 0.96700 * 114.00057 * 299.99941 * 21 20 19 42 42 H 1.48499 * 109.99654 * 58.67750 * 22 20 19 43 43 H 1.48491 * 109.99814 * 180.02562 * 22 20 19 44 44 H 1.08008 * 119.93680 * 179.74557 * 23 19 18 45 45 H 1.08001 * 119.97426 * 179.97438 * 24 23 19 46 46 H 1.08002 * 120.02087 * 180.02562 * 25 24 23 47 47 H 1.08993 * 113.61229 * 105.47191 * 26 6 5 48 48 H 1.09000 * 113.61263 * 334.56841 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 -0.0002 7 1 3.4245 3.3550 0.6935 8 6 5.5208 2.9348 0.1232 9 6 5.3818 4.0666 -0.9088 10 1 6.1882 4.0905 -1.6417 11 7 5.1160 5.3770 -0.3103 12 6 5.4582 6.5012 -0.9702 13 8 5.9867 6.4279 -2.0594 14 6 5.1853 7.8493 -0.3544 15 6 5.6673 8.9497 -1.3017 16 8 5.4091 10.2280 -0.7175 17 6 5.7791 11.3209 -1.4357 18 6 5.5530 12.5930 -0.9311 19 6 5.9353 13.7023 -1.6607 20 6 5.6956 15.0846 -1.1104 21 8 4.2962 15.2744 -0.8924 22 14 6.3120 16.3531 -2.3277 23 6 6.5328 13.5452 -2.8975 24 6 6.7537 12.2782 -3.4054 25 6 6.3785 11.1659 -2.6774 26 6 4.1165 3.3493 -1.4082 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 3.9564 0.7805 -0.8892 31 1 3.9557 0.7810 0.8908 32 1 6.0994 2.0842 -0.2370 33 1 5.8404 3.2780 1.1071 34 1 4.6936 5.4357 0.5610 35 1 4.1146 7.9602 -0.1828 36 1 5.7156 7.9292 0.5946 37 1 6.7381 8.8386 -1.4728 38 1 5.1375 8.8700 -2.2509 39 1 5.0822 12.7162 0.0330 40 1 6.2291 15.1975 -0.1666 41 1 3.7583 15.1881 -1.6914 42 1 5.6152 16.1891 -3.6287 43 1 6.0819 17.7205 -1.7964 44 1 6.8272 14.4137 -3.4681 45 1 7.2203 12.1581 -4.3720 46 1 6.5517 10.1766 -3.0744 47 1 3.3010 4.0272 -1.6600 48 1 4.3111 2.6119 -2.1870 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:57 Heat of formation + Delta-G solvation = -140.283913 kcal Electronic energy + Delta-G solvation = -29292.741184 eV Core-core repulsion = 24894.655250 eV Total energy + Delta-G solvation = -4398.085933 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.81031 -41.33535 -40.98929 -39.63292 -38.99367 -37.43818 -37.30578 -34.74916 -33.31828 -32.41946 -31.62812 -30.69509 -28.51507 -27.02968 -26.86546 -25.79534 -24.34451 -23.61646 -22.21604 -21.90129 -21.51736 -20.33272 -19.35284 -18.59139 -18.26014 -17.79670 -17.63312 -17.49887 -17.46819 -17.11130 -17.05899 -16.75632 -16.22596 -15.99576 -15.79566 -15.45003 -15.32911 -14.90069 -14.86820 -14.63264 -14.36440 -14.13706 -14.11221 -14.03332 -13.64296 -13.48829 -13.18488 -13.03773 -12.97815 -12.84560 -12.78464 -12.36570 -12.24072 -11.90734 -11.81420 -11.79576 -11.75268 -11.52449 -11.40831 -11.37642 -11.01598 -10.62497 -10.16296 -9.86730 -9.19392 -4.92338 0.26559 0.46375 1.19810 1.29762 1.49243 1.63725 1.67107 1.69905 1.99022 2.44556 2.72666 3.28540 3.31941 3.40036 3.50355 3.59622 3.65785 3.68202 3.81029 3.83820 3.85652 3.93399 4.09883 4.13657 4.19666 4.23234 4.25368 4.28164 4.30612 4.36994 4.37926 4.54804 4.57013 4.57259 4.59610 4.60652 4.62483 4.72148 4.74208 4.92513 4.96299 5.02826 5.06032 5.32040 5.39380 5.43239 5.47616 5.49385 5.73522 6.32212 6.42273 6.42870 6.72923 7.07711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.505 6.505 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.139 4.139 9 C 0.119 3.881 10 H 0.107 0.893 11 N -0.711 5.711 12 C 0.524 3.476 13 O -0.537 6.537 14 C -0.142 4.142 15 C 0.075 3.925 16 O -0.316 6.316 17 C 0.132 3.868 18 C -0.126 4.126 19 C -0.081 4.081 20 C -0.076 4.076 21 O -0.529 6.529 22 Si 0.689 3.311 23 C -0.155 4.155 24 C -0.073 4.073 25 C -0.202 4.202 26 C -0.147 4.147 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.109 0.891 31 H 0.110 0.890 32 H 0.101 0.899 33 H 0.079 0.921 34 H 0.404 0.596 35 H 0.108 0.892 36 H 0.108 0.892 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.134 0.866 40 H 0.120 0.880 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.129 0.871 45 H 0.131 0.869 46 H 0.133 0.867 47 H 0.075 0.925 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.250 -4.563 1.404 5.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.393 6.393 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.177 4.177 9 C 0.014 3.986 10 H 0.125 0.875 11 N -0.362 5.362 12 C 0.311 3.689 13 O -0.413 6.413 14 C -0.182 4.182 15 C -0.001 4.001 16 O -0.230 6.230 17 C 0.087 3.913 18 C -0.144 4.144 19 C -0.081 4.081 20 C -0.186 4.186 21 O -0.335 6.335 22 Si 0.590 3.410 23 C -0.172 4.172 24 C -0.091 4.091 25 C -0.221 4.221 26 C -0.185 4.185 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.127 0.873 31 H 0.128 0.872 32 H 0.119 0.881 33 H 0.097 0.903 34 H 0.239 0.761 35 H 0.126 0.874 36 H 0.126 0.874 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.152 0.848 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.146 0.854 45 H 0.148 0.852 46 H 0.150 0.850 47 H 0.094 0.906 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 2.300 -3.571 0.902 4.343 hybrid contribution -1.649 -0.598 0.157 1.761 sum 0.651 -4.169 1.060 4.351 Atomic orbital electron populations 1.23299 0.75942 1.03958 1.02677 1.86508 1.23791 1.33548 1.84036 1.23846 0.92332 0.81375 0.72296 1.90687 1.67281 1.36333 1.44963 1.21453 0.87535 0.99104 1.06193 1.22535 0.96318 0.94050 0.99224 0.87953 1.23401 0.95627 0.98606 1.00087 1.21814 0.98690 0.81556 0.96552 0.87489 1.45618 1.62891 1.05038 1.22687 1.20290 0.77677 0.85678 0.85295 1.90751 1.42443 1.87532 1.20584 1.21471 1.05165 0.90657 1.00894 1.22411 1.01669 0.79811 0.96185 1.85977 1.78425 1.13115 1.45495 1.18957 0.94779 0.86889 0.90652 1.20238 1.03900 0.88601 1.01706 1.20073 0.98333 0.95285 0.94449 1.25079 0.85786 0.98193 1.09494 1.86602 1.16367 1.93262 1.37270 0.94892 0.91787 0.77495 0.76851 1.20925 1.02745 0.97587 0.95988 1.20928 0.97304 0.91527 0.99362 1.21401 1.04859 1.00443 0.95372 1.23523 0.98505 1.00120 0.96399 0.87896 0.91791 0.91783 0.87254 0.87216 0.88074 0.90254 0.76100 0.87395 0.87356 0.90845 0.90941 0.84827 0.86205 0.77595 1.18495 1.18229 0.85404 0.85153 0.84964 0.90583 0.88895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.31 10.56 -39.25 -0.41 -0.73 16 3 C 0.46 0.40 7.96 36.00 0.29 0.69 16 4 O -0.51 -1.92 15.51 -18.75 -0.29 -2.21 16 5 C -0.11 0.28 5.65 -27.88 -0.16 0.13 16 6 C -0.10 0.25 3.03 -89.81 -0.27 -0.02 16 7 H 0.10 -0.15 7.68 -51.93 -0.40 -0.55 16 8 C -0.14 0.51 7.39 -25.92 -0.19 0.31 16 9 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 10 H 0.11 0.01 7.47 -51.93 -0.39 -0.38 16 11 N -0.71 1.16 5.26 -53.02 -0.28 0.88 16 12 C 0.52 0.26 7.83 -10.99 -0.09 0.18 16 13 O -0.54 -2.35 15.58 5.56 0.09 -2.26 16 14 C -0.14 0.20 6.07 -27.89 -0.17 0.03 16 15 C 0.07 0.04 4.03 37.15 0.15 0.19 16 16 O -0.32 -0.70 10.14 -19.43 -0.20 -0.90 16 17 C 0.13 0.33 6.69 -39.22 -0.26 0.07 16 18 C -0.13 -0.29 9.55 -39.43 -0.38 -0.67 16 19 C -0.08 -0.09 5.39 -104.64 -0.56 -0.66 16 20 C -0.08 -0.03 2.82 36.01 0.10 0.07 16 21 O -0.53 -1.01 12.76 -35.23 -0.45 -1.46 16 22 Si 0.69 -0.36 29.79 -169.99 -5.06 -5.42 16 23 C -0.15 -0.07 8.67 -39.56 -0.34 -0.41 16 24 C -0.07 -0.04 10.04 -39.61 -0.40 -0.44 16 25 C -0.20 -0.31 9.04 -39.43 -0.36 -0.67 16 26 C -0.15 0.18 7.43 -25.92 -0.19 -0.02 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.11 -0.44 7.84 -51.92 -0.41 -0.85 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 32 H 0.10 -0.47 8.10 -51.93 -0.42 -0.89 16 33 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 34 H 0.40 -1.59 8.70 -40.82 -0.36 -1.94 16 35 H 0.11 -0.27 8.14 -51.93 -0.42 -0.70 16 36 H 0.11 -0.32 8.14 -51.92 -0.42 -0.75 16 37 H 0.07 0.06 7.62 -51.93 -0.40 -0.34 16 38 H 0.07 0.08 7.62 -51.93 -0.40 -0.32 16 39 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 40 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 41 H 0.38 -0.32 8.70 45.56 0.40 0.07 16 42 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 43 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 44 H 0.13 -0.18 4.87 -52.48 -0.26 -0.44 16 45 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 46 H 0.13 0.08 6.30 -52.49 -0.33 -0.25 16 47 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 48 H 0.09 -0.18 7.89 -51.93 -0.41 -0.59 16 LS Contribution 402.25 15.07 6.06 6.06 Total: 0.00 -9.93 402.25 -9.80 -19.73 By element: Atomic # 1 Polarization: -5.86 SS G_CDS: -7.20 Total: -13.06 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -2.05 Total: -0.64 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.28 Total: 0.88 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -1.27 Total: -7.56 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.06 Total: -5.42 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -9.93 -9.80 -19.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.552 kcal (2) G-P(sol) polarization free energy of solvation -9.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds