Wall clock time and date at job start Sun Mar 7 2021 08:10:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34222 * 117.00418 * 2 1 4 4 O 1.20821 * 120.00264 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00036 * 180.02562 * 3 2 1 6 6 C 1.53005 * 109.47179 * 180.02562 * 5 3 2 7 7 H 1.08998 * 112.85368 * 43.79816 * 6 5 3 8 8 C 1.53779 * 113.61647 * 175.00006 * 6 5 3 9 9 C 1.53779 * 87.08335 * 139.97926 * 8 6 5 10 10 H 1.08998 * 113.61289 * 219.93711 * 9 8 6 11 11 N 1.46498 * 113.61609 * 89.11541 * 9 8 6 12 12 C 1.34773 * 119.99840 * 155.00357 * 11 9 8 13 13 O 1.21288 * 120.00303 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99983 * 180.02562 * 12 11 9 15 15 O 1.42903 * 109.47141 * 179.97438 * 14 12 11 16 16 C 1.35900 * 116.99934 * 179.97438 * 15 14 12 17 17 C 1.38750 * 120.02845 * 179.97438 * 16 15 14 18 18 C 1.50697 * 119.97094 * 0.02562 * 17 16 15 19 19 O 1.42898 * 109.47257 * 284.99777 * 18 17 16 20 20 Si 1.86305 * 109.47073 * 165.00010 * 18 17 16 21 21 C 1.38201 * 120.05532 * 180.02562 * 17 16 15 22 22 C 1.38153 * 120.11049 * 0.02562 * 21 17 16 23 23 C 1.38797 * 120.05322 * 359.97438 * 22 21 17 24 24 O 1.35898 * 120.02645 * 179.97438 * 23 22 21 25 25 C 1.42897 * 117.00072 * 0.02562 * 24 23 22 26 26 C 1.38615 * 119.94590 * 0.02562 * 23 22 21 27 27 C 1.53779 * 87.08090 * 334.56547 * 9 8 6 28 28 H 1.09006 * 109.46535 * 300.00153 * 1 2 3 29 29 H 1.09000 * 109.46645 * 59.99612 * 1 2 3 30 30 H 1.08994 * 109.47420 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47397 * 60.00159 * 5 3 2 32 32 H 1.08995 * 109.47133 * 299.99271 * 5 3 2 33 33 H 1.09004 * 113.61661 * 25.42757 * 8 6 5 34 34 H 1.09005 * 113.61389 * 254.52960 * 8 6 5 35 35 H 0.97000 * 120.00116 * 334.99496 * 11 9 8 36 36 H 1.08997 * 109.47707 * 59.99395 * 14 12 11 37 37 H 1.08997 * 109.46952 * 299.99366 * 14 12 11 38 38 H 1.08993 * 109.46987 * 45.00282 * 18 17 16 39 39 H 0.96697 * 114.00080 * 300.00254 * 19 18 17 40 40 H 1.48495 * 110.00160 * 180.02562 * 20 18 17 41 41 H 1.48496 * 109.99832 * 301.32428 * 20 18 17 42 42 H 1.08000 * 119.94468 * 179.97438 * 21 17 16 43 43 H 1.07992 * 119.97664 * 179.97438 * 22 21 17 44 44 H 1.09003 * 109.46850 * 60.00726 * 25 24 23 45 45 H 1.09002 * 109.46749 * 180.02562 * 25 24 23 46 46 H 1.08997 * 109.47251 * 300.00322 * 25 24 23 47 47 H 1.08004 * 120.05142 * 179.72861 * 26 23 22 48 48 H 1.09004 * 113.61616 * 139.98138 * 27 9 8 49 49 H 1.09005 * 113.61665 * 270.88804 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.0003 2.7419 0.0002 7 1 3.4255 3.3530 0.6960 8 6 5.5211 2.9345 0.1225 9 6 5.3813 4.0674 -0.9079 10 1 6.1879 4.0931 -1.6406 11 7 5.1161 5.3772 -0.3077 12 6 5.4578 6.5021 -0.9666 13 8 5.9854 6.4301 -2.0563 14 6 5.1855 7.8494 -0.3489 15 8 5.6350 8.8783 -1.2329 16 6 5.4618 10.1626 -0.8235 17 6 5.8759 11.2111 -1.6324 18 6 6.5175 10.9252 -2.9657 19 8 7.8562 10.4688 -2.7622 20 14 6.5410 12.4813 -3.9899 21 6 5.7006 12.5173 -1.2164 22 6 5.1133 12.7825 0.0056 23 6 4.6973 11.7372 0.8184 24 8 4.1202 11.9987 2.0206 25 6 3.9723 13.3728 2.3840 26 6 4.8721 10.4262 0.4034 27 6 4.1156 3.3509 -1.4072 28 1 -0.3632 0.5139 0.8900 29 1 -0.3632 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.9557 0.7808 -0.8908 32 1 3.9564 0.7805 0.8892 33 1 6.0994 2.0842 -0.2392 34 1 5.8401 3.2766 1.1070 35 1 4.6943 5.4348 0.5640 36 1 5.7164 7.9283 0.5997 37 1 4.1150 7.9603 -0.1764 38 1 5.9466 10.1564 -3.4862 39 1 8.4228 11.1039 -2.3032 40 1 7.1706 12.2127 -5.3076 41 1 5.1569 12.9839 -4.1819 42 1 6.0240 13.3320 -1.8473 43 1 4.9777 13.8040 0.3287 44 1 3.3516 13.8793 1.6449 45 1 3.4994 13.4405 3.3638 46 1 4.9532 13.8465 2.4209 47 1 4.5531 9.6114 1.0365 48 1 3.2999 4.0292 -1.6577 49 1 4.3096 2.6144 -2.1871 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:10:53 Heat of formation + Delta-G solvation = -163.147321 kcal Electronic energy + Delta-G solvation = -32588.972867 eV Core-core repulsion = 27871.213310 eV Total energy + Delta-G solvation = -4717.759557 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.88314 -41.65339 -41.01729 -40.11877 -39.24711 -38.11326 -37.40716 -36.81356 -34.71892 -32.27092 -31.91813 -31.24877 -29.40876 -28.52197 -28.34025 -26.83268 -26.03874 -24.82570 -23.63346 -22.45216 -21.90429 -21.86311 -20.33455 -19.90369 -18.65720 -18.48507 -17.99395 -17.80068 -17.64339 -17.50828 -17.46906 -17.17568 -16.82788 -16.74044 -16.43569 -15.94296 -15.77896 -15.59095 -15.23553 -15.11959 -15.04584 -14.75346 -14.53091 -14.35718 -14.12041 -13.81274 -13.72348 -13.47386 -13.45801 -13.38783 -13.16531 -13.02658 -12.84113 -12.53437 -12.22607 -12.13882 -12.02136 -11.79825 -11.73180 -11.71796 -11.63759 -11.38733 -11.34793 -10.85734 -10.20100 -10.13270 -9.67883 -9.06019 -4.95395 0.22648 0.34484 1.21538 1.42052 1.43106 1.51981 1.71516 1.74435 2.10383 2.16312 2.55474 2.60615 3.31001 3.34308 3.49511 3.62934 3.65545 3.70845 3.72476 3.82117 3.83436 3.90446 3.95222 4.03464 4.04854 4.14861 4.15165 4.21135 4.25307 4.26453 4.30672 4.38743 4.40049 4.41476 4.53057 4.56681 4.60804 4.62830 4.74467 4.75139 4.94958 4.99831 5.04508 5.07598 5.24016 5.28837 5.40903 5.45705 5.51009 6.12744 6.31275 6.40003 6.74573 6.82878 7.13400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.505 6.505 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.138 4.138 9 C 0.122 3.878 10 H 0.108 0.892 11 N -0.711 5.711 12 C 0.519 3.481 13 O -0.506 6.506 14 C 0.037 3.963 15 O -0.272 6.272 16 C 0.192 3.808 17 C -0.185 4.185 18 C -0.051 4.051 19 O -0.533 6.533 20 Si 0.680 3.320 21 C -0.034 4.034 22 C -0.240 4.240 23 C 0.174 3.826 24 O -0.315 6.315 25 C 0.025 3.975 26 C -0.248 4.248 27 C -0.147 4.147 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.103 0.897 31 H 0.110 0.890 32 H 0.110 0.890 33 H 0.102 0.898 34 H 0.079 0.921 35 H 0.403 0.597 36 H 0.097 0.903 37 H 0.096 0.904 38 H 0.113 0.887 39 H 0.372 0.628 40 H -0.254 1.254 41 H -0.257 1.257 42 H 0.139 0.861 43 H 0.136 0.864 44 H 0.059 0.941 45 H 0.103 0.897 46 H 0.060 0.940 47 H 0.138 0.862 48 H 0.076 0.924 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.219 0.572 6.277 6.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.393 6.393 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.176 4.176 9 C 0.017 3.983 10 H 0.126 0.874 11 N -0.364 5.364 12 C 0.304 3.696 13 O -0.379 6.379 14 C -0.042 4.042 15 O -0.183 6.183 16 C 0.145 3.855 17 C -0.187 4.187 18 C -0.162 4.162 19 O -0.337 6.337 20 Si 0.581 3.419 21 C -0.052 4.052 22 C -0.258 4.258 23 C 0.128 3.872 24 O -0.228 6.228 25 C -0.070 4.070 26 C -0.267 4.267 27 C -0.186 4.186 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.120 0.880 34 H 0.098 0.902 35 H 0.238 0.762 36 H 0.115 0.885 37 H 0.114 0.886 38 H 0.131 0.869 39 H 0.219 0.781 40 H -0.179 1.179 41 H -0.182 1.182 42 H 0.156 0.844 43 H 0.154 0.846 44 H 0.077 0.923 45 H 0.121 0.879 46 H 0.078 0.922 47 H 0.156 0.844 48 H 0.094 0.906 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.547 0.484 4.368 4.429 hybrid contribution -1.084 -0.298 0.948 1.470 sum -1.630 0.186 5.316 5.564 Atomic orbital electron populations 1.23298 0.75964 1.03947 1.02663 1.86509 1.23773 1.33561 1.84040 1.23846 0.92336 0.81367 0.72285 1.90683 1.67285 1.36333 1.44971 1.21454 0.87516 0.99122 1.06202 1.22543 0.96333 0.94030 0.99231 0.87964 1.23407 0.95601 0.98555 1.00081 1.21802 0.98769 0.81153 0.96569 0.87380 1.45456 1.63529 1.04786 1.22666 1.19988 0.78751 0.85069 0.85824 1.90805 1.40424 1.86878 1.19804 1.22512 1.01638 0.86077 0.93952 1.86263 1.77185 1.11441 1.43441 1.18407 0.92230 0.83636 0.91206 1.19603 1.08605 0.91216 0.99247 1.24851 0.85033 1.09168 0.97163 1.86599 1.19707 1.46437 1.80953 0.95359 0.84140 0.81099 0.81260 1.20590 0.95088 0.94536 0.94948 1.21128 1.08764 0.98944 0.97005 1.18682 0.90820 0.93096 0.84611 1.86078 1.75249 1.28566 1.32882 1.23148 1.01936 0.80087 1.01780 1.20402 1.11947 0.95981 0.98364 1.23533 0.98500 1.00121 0.96405 0.91807 0.91789 0.87902 0.87233 0.87222 0.87986 0.90216 0.76247 0.88499 0.88640 0.86925 0.78123 1.17893 1.18220 0.84367 0.84644 0.92254 0.87902 0.92167 0.84415 0.90554 0.88819 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.56 -39.24 -0.41 -0.81 16 3 C 0.46 0.52 7.96 36.01 0.29 0.81 16 4 O -0.51 -2.05 15.51 -18.75 -0.29 -2.34 16 5 C -0.11 0.25 5.65 -27.88 -0.16 0.09 16 6 C -0.10 0.21 3.03 -89.80 -0.27 -0.06 16 7 H 0.10 -0.13 7.68 -51.93 -0.40 -0.53 16 8 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 9 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 10 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 11 N -0.71 0.54 5.26 -53.02 -0.28 0.26 16 12 C 0.52 1.28 7.91 -10.99 -0.09 1.19 16 13 O -0.51 -3.78 16.10 -14.36 -0.23 -4.02 16 14 C 0.04 0.02 5.22 36.00 0.19 0.20 16 15 O -0.27 -1.12 8.99 -39.34 -0.35 -1.47 16 16 C 0.19 0.56 6.66 -39.24 -0.26 0.30 16 17 C -0.19 -0.40 5.27 -104.45 -0.55 -0.95 16 18 C -0.05 -0.13 2.37 36.00 0.09 -0.05 16 19 O -0.53 -1.75 12.88 -35.23 -0.45 -2.20 16 20 Si 0.68 0.34 29.91 -169.99 -5.09 -4.74 16 21 C -0.03 0.00 8.65 -39.63 -0.34 -0.35 16 22 C -0.24 -0.02 9.04 -39.41 -0.36 -0.38 16 23 C 0.17 0.25 6.68 -39.24 -0.26 -0.01 16 24 O -0.31 -0.35 10.49 -19.42 -0.20 -0.56 16 25 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 26 C -0.25 -0.41 8.97 -39.29 -0.35 -0.76 16 27 C -0.15 0.09 7.43 -25.92 -0.19 -0.11 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 30 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.11 -0.40 7.84 -51.93 -0.41 -0.81 16 32 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 33 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.40 -1.45 8.70 -40.82 -0.36 -1.81 16 36 H 0.10 -0.20 7.66 -51.93 -0.40 -0.60 16 37 H 0.10 -0.17 7.66 -51.93 -0.40 -0.57 16 38 H 0.11 0.53 7.82 -51.93 -0.41 0.12 16 39 H 0.37 -0.49 8.70 45.56 0.40 -0.09 16 40 H -0.25 -0.99 7.11 56.52 0.40 -0.59 16 41 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 42 H 0.14 -0.37 5.12 -52.49 -0.27 -0.64 16 43 H 0.14 -0.30 6.29 -52.49 -0.33 -0.63 16 44 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 45 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 46 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 47 H 0.14 -0.03 6.30 -52.48 -0.33 -0.36 16 48 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 49 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 LS Contribution 410.38 15.07 6.18 6.18 Total: 0.00 -12.96 410.38 -8.89 -21.85 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -7.07 Total: -13.97 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -0.70 Total: 1.80 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.28 Total: 0.26 kcal Atomic # 8 Polarization: -9.45 SS G_CDS: -1.95 Total: -11.39 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.09 Total: -4.74 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -12.96 -8.89 -21.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.293 kcal (2) G-P(sol) polarization free energy of solvation -12.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds