Wall clock time and date at job start Sun Mar 7 2021 08:11:10
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 O 1.45197 * 1
3 3 C 1.34227 * 117.00407 * 2 1
4 4 O 1.20826 * 119.99739 * 359.97438 * 3 2 1
5 5 C 1.50695 * 120.00265 * 179.97438 * 3 2 1
6 6 C 1.53001 * 109.47231 * 180.02562 * 5 3 2
7 7 H 1.08998 * 112.85173 * 316.20016 * 6 5 3
8 8 C 1.53777 * 113.61498 * 87.50405 * 6 5 3
9 9 C 1.53783 * 87.08370 * 139.98154 * 8 6 5
10 10 H 1.09001 * 113.69341 * 220.01316 * 9 8 6
11 11 N 1.46497 * 113.61355 * 89.11441 * 9 8 6
12 12 C 1.34775 * 120.00052 * 107.50593 * 11 9 8
13 13 O 1.21285 * 119.99644 * 0.02562 * 12 11 9
14 14 C 1.50696 * 120.00393 * 180.02562 * 12 11 9
15 15 N 1.46906 * 109.47351 * 180.02562 * 14 12 11
16 16 C 1.46901 * 110.99793 * 293.95574 * 15 14 12
17 17 C 1.39673 * 111.00047 * 170.00017 * 15 14 12
18 18 C 1.38890 * 120.07192 * 239.72217 * 17 15 14
19 19 C 1.50699 * 120.03969 * 0.02562 * 18 17 15
20 20 O 1.42895 * 109.46882 * 284.99754 * 19 18 17
21 21 Si 1.86300 * 109.46948 * 164.99833 * 19 18 17
22 22 C 1.38129 * 119.92191 * 179.78839 * 18 17 15
23 23 C 1.38262 * 120.07326 * 0.49339 * 22 18 17
24 24 C 1.50701 * 119.92613 * 179.76751 * 23 22 18
25 25 F 1.39897 * 109.47329 * 179.97438 * 24 23 22
26 26 F 1.39908 * 109.46784 * 299.97202 * 24 23 22
27 27 F 1.39898 * 109.47381 * 59.97238 * 24 23 22
28 28 C 1.38313 * 120.15150 * 359.73818 * 23 22 18
29 29 C 1.38077 * 120.07164 * 0.02562 * 28 23 22
30 30 C 1.53778 * 113.61643 * 185.00359 * 6 5 3
31 31 H 1.09005 * 109.47516 * 300.00310 * 1 2 3
32 32 H 1.09008 * 109.46906 * 59.99780 * 1 2 3
33 33 H 1.08996 * 109.47576 * 179.97438 * 1 2 3
34 34 H 1.09003 * 109.47027 * 60.00601 * 5 3 2
35 35 H 1.08999 * 109.47361 * 300.00230 * 5 3 2
36 36 H 1.09005 * 113.61535 * 25.43295 * 8 6 5
37 37 H 1.08998 * 113.61605 * 254.53119 * 8 6 5
38 38 H 0.96996 * 120.00294 * 287.50533 * 11 9 8
39 39 H 1.08997 * 109.47055 * 60.00070 * 14 12 11
40 40 H 1.09001 * 109.47156 * 299.99838 * 14 12 11
41 41 H 1.09002 * 109.47401 * 59.99808 * 16 15 14
42 42 H 1.09001 * 109.46874 * 299.99821 * 16 15 14
43 43 H 1.09004 * 109.46970 * 179.97438 * 16 15 14
44 44 H 1.09001 * 109.47365 * 45.00015 * 19 18 17
45 45 H 0.96697 * 114.00408 * 300.00097 * 20 19 18
46 46 H 1.48507 * 109.99784 * 179.97438 * 21 19 18
47 47 H 1.48503 * 110.00100 * 301.31695 * 21 19 18
48 48 H 1.07999 * 119.96080 * 180.23130 * 22 18 17
49 49 H 1.08000 * 119.96216 * 180.02562 * 28 23 22
50 50 H 1.07997 * 120.03526 * 179.97438 * 29 28 23
51 51 H 1.09003 * 113.61889 * 105.46709 * 30 6 5
52 52 H 1.09005 * 113.68841 * 334.57965 * 30 6 5
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 8 1.4520 0.0000 0.0000
3 6 2.0614 1.1959 0.0000
4 8 1.4034 2.2093 -0.0005
5 6 3.5663 1.2748 0.0006
6 6 4.0002 2.7420 0.0011
7 1 3.4253 3.3536 -0.6942
8 6 4.1155 3.3497 1.4090
9 6 5.3812 4.0668 0.9103
10 1 6.1879 4.0919 1.6430
11 7 5.1159 5.3770 0.3111
12 6 5.4577 6.5014 0.9709
13 8 5.9854 6.4284 2.0605
14 6 5.1843 7.8493 0.3549
15 7 5.6467 8.9063 1.2643
16 6 4.8545 8.9201 2.5014
17 6 5.6178 10.1540 0.6374
18 6 6.7865 10.8922 0.5020
19 6 8.0882 10.3475 1.0311
20 8 8.1074 10.4592 2.4555
21 14 9.5058 11.3199 0.3129
22 6 6.7551 12.1238 -0.1224
23 6 5.5603 12.6266 -0.6034
24 6 5.5290 13.9730 -1.2795
25 9 4.2201 14.2645 -1.6780
26 9 5.9738 14.9537 -0.3863
27 9 6.3641 13.9510 -2.4016
28 6 4.3938 11.8962 -0.4660
29 6 4.4189 10.6622 0.1529
30 6 5.5209 2.9347 -0.1212
31 1 -0.3634 0.5139 0.8900
32 1 -0.3633 0.5139 -0.8900
33 1 -0.3634 -1.0276 -0.0005
34 1 3.9564 0.7805 -0.8892
35 1 3.9557 0.7808 0.8908
36 1 4.3096 2.6127 2.1882
37 1 3.2998 4.0278 1.6600
38 1 4.6942 5.4354 -0.5604
39 1 4.1136 7.9599 0.1833
40 1 5.7145 7.9294 -0.5941
41 1 4.9509 7.9585 3.0054
42 1 3.8069 9.1004 2.2599
43 1 5.2181 9.7116 3.1568
44 1 8.1858 9.2996 0.7474
45 1 8.0246 11.3662 2.7802
46 1 10.7954 10.7929 0.8274
47 1 9.4784 11.2380 -1.1697
48 1 7.6642 12.6966 -0.2313
49 1 3.4622 12.2917 -0.8432
50 1 3.5077 10.0926 0.2602
51 1 5.8399 3.2777 -1.1054
52 1 6.1005 2.0848 0.2392
There are 77 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 77
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_16627170_6406254.mol2 52
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 08:11:10
Heat of formation + Delta-G solvation = -222.803720 kcal
Electronic energy + Delta-G solvation = -40545.560268 eV
Core-core repulsion = 34677.715123 eV
Total energy + Delta-G solvation = -5867.845144 eV
No. of doubly occupied orbitals = 77
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 417.164 amu
Computer time = 1.25 seconds
Orbital eigenvalues (eV)
-51.18418 -48.71325 -48.64105 -41.88280 -41.60357 -40.91706 -39.53469 -37.70865
-37.57208 -37.41496 -34.68976 -32.98942 -32.18340 -31.61691 -29.40755 -28.34144
-27.58251 -26.97915 -26.69410 -25.29060 -24.46589 -23.31455 -22.20513 -21.87282
-21.59575 -20.20295 -19.60683 -19.50286 -19.40036 -18.62378 -18.55528 -17.77862
-17.72121 -17.56506 -17.44948 -17.02348 -16.90264 -16.50293 -16.26371 -15.99884
-15.62209 -15.54933 -15.46323 -15.35266 -15.26784 -15.11228 -15.08351 -14.84777
-14.80195 -14.75054 -14.68173 -14.56690 -14.24795 -14.15473 -13.93569 -13.75195
-13.56981 -13.36091 -13.25449 -12.99605 -12.97555 -12.83863 -12.67627 -12.54113
-12.26712 -12.05559 -11.96750 -11.84572 -11.72942 -11.38760 -11.22194 -10.93193
-10.39216 -10.22456 -10.11230 -10.06619 -9.58553 -5.06416 -0.34556 0.01584
1.16641 1.26124 1.55115 1.58158 1.60643 1.77789 1.90598 1.93773
2.18367 2.63795 2.75273 2.95127 3.37538 3.44668 3.48770 3.49189
3.61934 3.68151 3.74609 3.77494 3.85233 3.91228 4.02899 4.04860
4.06415 4.19911 4.24413 4.25298 4.26474 4.40364 4.40828 4.46697
4.50123 4.52510 4.59745 4.63985 4.67481 4.75861 4.80214 4.86736
4.88752 4.97516 5.02944 5.03328 5.10514 5.17470 5.23670 5.40314
5.41190 5.59376 5.64906 6.14897 6.50649 6.70075 6.84978 7.22762
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.028 3.972
2 O -0.369 6.369
3 C 0.455 3.545
4 O -0.542 6.542
5 C -0.102 4.102
6 C -0.095 4.095
7 H 0.093 0.907
8 C -0.148 4.148
9 C 0.114 3.886
10 H 0.085 0.915
11 N -0.704 5.704
12 C 0.514 3.486
13 O -0.559 6.559
14 C 0.037 3.963
15 N -0.499 5.499
16 C 0.034 3.966
17 C 0.139 3.861
18 C -0.103 4.103
19 C -0.047 4.047
20 O -0.543 6.543
21 Si 0.750 3.250
22 C -0.059 4.059
23 C -0.186 4.186
24 C 0.509 3.491
25 F -0.179 7.179
26 F -0.176 7.176
27 F -0.181 7.181
28 C -0.053 4.053
29 C -0.145 4.145
30 C -0.121 4.121
31 H 0.058 0.942
32 H 0.060 0.940
33 H 0.126 0.874
34 H 0.133 0.867
35 H 0.127 0.873
36 H 0.098 0.902
37 H 0.051 0.949
38 H 0.414 0.586
39 H 0.095 0.905
40 H 0.121 0.879
41 H 0.072 0.928
42 H 0.042 0.958
43 H 0.070 0.930
44 H 0.102 0.898
45 H 0.389 0.611
46 H -0.296 1.296
47 H -0.280 1.280
48 H 0.155 0.845
49 H 0.156 0.844
50 H 0.153 0.847
51 H 0.089 0.911
52 H 0.116 0.884
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -2.427 -3.261 -3.266 5.215
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.065 4.065
2 O -0.286 6.286
3 C 0.300 3.700
4 O -0.432 6.432
5 C -0.139 4.139
6 C -0.113 4.113
7 H 0.111 0.889
8 C -0.187 4.187
9 C 0.008 3.992
10 H 0.103 0.897
11 N -0.357 5.357
12 C 0.301 3.699
13 O -0.436 6.436
14 C -0.092 4.092
15 N -0.220 5.220
16 C -0.112 4.112
17 C 0.045 3.955
18 C -0.104 4.104
19 C -0.158 4.158
20 O -0.350 6.350
21 Si 0.656 3.344
22 C -0.077 4.077
23 C -0.187 4.187
24 C 0.455 3.545
25 F -0.160 7.160
26 F -0.158 7.158
27 F -0.162 7.162
28 C -0.072 4.072
29 C -0.165 4.165
30 C -0.159 4.159
31 H 0.076 0.924
32 H 0.079 0.921
33 H 0.145 0.855
34 H 0.151 0.849
35 H 0.145 0.855
36 H 0.116 0.884
37 H 0.070 0.930
38 H 0.251 0.749
39 H 0.113 0.887
40 H 0.139 0.861
41 H 0.091 0.909
42 H 0.061 0.939
43 H 0.088 0.912
44 H 0.119 0.881
45 H 0.238 0.762
46 H -0.224 1.224
47 H -0.206 1.206
48 H 0.172 0.828
49 H 0.174 0.826
50 H 0.170 0.830
51 H 0.108 0.892
52 H 0.134 0.866
Dipole moment (debyes) X Y Z Total
from point charges -1.011 -3.787 -2.881 4.864
hybrid contribution -1.768 -0.006 -0.584 1.862
sum -2.779 -3.792 -3.464 5.840
Atomic orbital electron populations
1.23469 0.75332 1.05428 1.02249 1.86515 1.24597 1.33648 1.83805
1.24556 0.93577 0.80810 0.71022 1.90664 1.68299 1.37369 1.46823
1.21592 0.85065 0.99152 1.08080 1.22421 0.96965 0.94096 0.97839
0.88877 1.23527 0.97634 1.00006 0.97517 1.21817 0.97899 0.82265
0.97214 0.89687 1.45573 1.62574 1.04624 1.22909 1.20772 0.77398
0.86531 0.85200 1.90716 1.43184 1.87544 1.22153 1.22158 1.02282
0.88022 0.96753 1.59114 1.56569 1.01011 1.05324 1.22467 0.94354
1.03832 0.90499 1.18889 0.92432 0.90266 0.93916 1.20254 0.96221
0.94095 0.99827 1.24884 0.99599 1.05307 0.85970 1.86588 1.96145
1.34104 1.18168 0.94425 0.74778 0.87651 0.77571 1.20785 0.97205
0.94647 0.95030 1.19948 0.97011 0.94634 1.07107 1.18326 0.73495
0.85912 0.76729 1.93175 1.37141 1.94406 1.91262 1.93238 1.89265
1.65343 1.67915 1.93230 1.72118 1.96836 1.54045 1.21127 0.97632
0.93387 0.95026 1.21880 0.98776 0.96473 0.99379 1.23343 0.94799
0.97905 0.99847 0.92352 0.92112 0.85540 0.84887 0.85528 0.88408
0.93043 0.74931 0.88708 0.86074 0.90928 0.93940 0.91156 0.88077
0.76198 1.22419 1.20639 0.82804 0.82630 0.82975 0.89232 0.86576
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 14.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16
2 O -0.37 -0.54 10.56 -51.38 -0.54 -1.08 16
3 C 0.46 0.75 7.96 71.23 0.57 1.32 16
4 O -0.54 -4.43 15.51 21.97 0.34 -4.09 16
5 C -0.10 0.65 5.65 29.85 0.17 0.82 16
6 C -0.09 0.50 3.03 -10.27 -0.03 0.47 16
7 H 0.09 -0.30 7.68 -2.39 -0.02 -0.31 16
8 C -0.15 0.23 7.43 31.12 0.23 0.46 16
9 C 0.11 -0.21 4.32 45.52 0.20 -0.01 16
10 H 0.08 0.25 7.46 -2.39 -0.02 0.23 16
11 N -0.70 1.79 5.26 -440.04 -2.32 -0.52 16
12 C 0.51 1.39 7.55 87.66 0.66 2.06 16
13 O -0.56 -6.77 13.91 -3.04 -0.04 -6.81 16
14 C 0.04 -0.09 5.03 85.55 0.43 0.34 16
15 N -0.50 -0.85 3.71 -724.42 -2.69 -3.54 16
16 C 0.03 0.09 8.94 127.69 1.14 1.23 16
17 C 0.14 -0.08 4.65 38.21 0.18 0.10 16
18 C -0.10 0.04 5.28 -19.73 -0.10 -0.06 16
19 C -0.05 -0.07 2.34 71.24 0.17 0.10 16
20 O -0.54 -1.60 12.88 -148.98 -1.92 -3.52 16
21 Si 0.75 -0.28 29.92 68.60 2.05 1.77 16
22 C -0.06 0.12 8.20 22.25 0.18 0.31 16
23 C -0.19 0.27 5.37 -19.84 -0.11 0.16 16
24 C 0.51 0.27 3.31 71.24 0.24 0.51 16
25 F -0.18 -0.23 15.96 44.97 0.72 0.48 16
26 F -0.18 -0.27 17.24 44.97 0.78 0.50 16
27 F -0.18 -0.45 17.23 44.97 0.78 0.32 16
28 C -0.05 0.19 9.42 22.25 0.21 0.40 16
29 C -0.15 0.58 8.70 22.40 0.19 0.78 16
30 C -0.12 0.96 7.39 31.12 0.23 1.19 16
31 H 0.06 -0.04 8.13 -2.38 -0.02 -0.06 16
32 H 0.06 -0.07 8.13 -2.38 -0.02 -0.09 16
33 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16
34 H 0.13 -1.43 8.14 -2.39 -0.02 -1.45 16
35 H 0.13 -1.20 7.84 -2.39 -0.02 -1.22 16
36 H 0.10 -0.29 7.90 -2.38 -0.02 -0.31 16
37 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16
38 H 0.41 -3.33 8.70 -92.71 -0.81 -4.14 16
39 H 0.10 -0.69 7.48 -2.39 -0.02 -0.71 16
40 H 0.12 -0.67 8.06 -2.39 -0.02 -0.69 16
41 H 0.07 0.57 5.88 -2.39 -0.01 0.56 16
42 H 0.04 -0.05 7.48 -2.39 -0.02 -0.07 16
43 H 0.07 0.26 8.13 -2.38 -0.02 0.24 16
44 H 0.10 0.55 7.78 -2.39 -0.02 0.53 16
45 H 0.39 -2.22 8.70 -74.06 -0.64 -2.86 16
46 H -0.30 -2.23 7.11 99.48 0.71 -1.53 16
47 H -0.28 -1.09 7.11 99.48 0.71 -0.38 16
48 H 0.15 -0.84 5.12 -2.91 -0.01 -0.86 16
49 H 0.16 -1.01 7.15 -2.91 -0.02 -1.03 16
50 H 0.15 -1.18 7.16 -2.91 -0.02 -1.20 16
51 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16
52 H 0.12 -1.22 8.10 -2.38 -0.02 -1.24 16
Total: 0.00 -25.86 440.98 2.49 -23.37
By element:
Atomic # 1 Polarization: -17.79 SS G_CDS: -0.41 Total: -18.20 kcal
Atomic # 6 Polarization: 5.56 SS G_CDS: 5.75 Total: 11.31 kcal
Atomic # 7 Polarization: 0.94 SS G_CDS: -5.01 Total: -4.06 kcal
Atomic # 8 Polarization: -13.33 SS G_CDS: -2.16 Total: -15.50 kcal
Atomic # 9 Polarization: -0.96 SS G_CDS: 2.27 Total: 1.31 kcal
Atomic # 14 Polarization: -0.28 SS G_CDS: 2.05 Total: 1.77 kcal
Total: -25.86 2.49 -23.37 kcal
The number of atoms in the molecule is 52
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_16627170_6406254.mol2 52
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -199.435 kcal
(2) G-P(sol) polarization free energy of solvation -25.859 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.294 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.490 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.369 kcal
(6) G-S(sol) free energy of system = (1) + (5) -222.804 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.25 seconds