Wall clock time and date at job start Sun Mar 7 2021 05:58:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09002 * 109.46962 * 173.82452 * 3 2 1 5 5 C 1.53005 * 109.46991 * 293.82044 * 3 2 1 6 6 C 1.52999 * 109.47159 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47317 * 300.00546 * 6 5 3 8 8 H 1.09002 * 109.47153 * 299.99641 * 7 6 5 9 9 N 1.46500 * 109.47007 * 179.97438 * 7 6 5 10 10 C 1.34777 * 120.00075 * 84.99755 * 9 7 6 11 11 O 1.21573 * 119.99510 * 0.02562 * 10 9 7 12 12 C 1.47693 * 120.00138 * 179.97438 * 10 9 7 13 13 C 1.39614 * 120.15308 * 359.72690 * 12 10 9 14 14 C 1.38118 * 119.85154 * 179.79187 * 13 12 10 15 15 F 1.35093 * 119.92115 * 180.20645 * 14 13 12 16 16 C 1.38621 * 120.16189 * 0.45980 * 14 13 12 17 17 C 1.50693 * 119.84060 * 179.76439 * 16 14 13 18 18 O 1.42903 * 109.47175 * 195.02276 * 17 16 14 19 19 Si 1.86301 * 109.47316 * 315.02624 * 17 16 14 20 20 C 1.38225 * 120.31427 * 359.79559 * 16 14 13 21 21 C 1.38271 * 120.15085 * 359.97077 * 20 16 14 22 22 F 1.35095 * 120.09162 * 180.02562 * 21 20 16 23 23 C 1.53000 * 109.47060 * 59.99960 * 7 6 5 24 24 C 1.52997 * 109.47240 * 53.82440 * 3 2 1 25 25 H 1.09000 * 109.47360 * 300.00416 * 5 3 2 26 26 H 1.09002 * 109.46935 * 60.00391 * 5 3 2 27 27 H 1.08996 * 109.46929 * 179.97438 * 6 5 3 28 28 H 1.09002 * 109.46716 * 60.00455 * 6 5 3 29 29 H 0.96997 * 120.00274 * 264.99726 * 9 7 6 30 30 H 1.08000 * 120.07722 * 359.97438 * 13 12 10 31 31 H 1.09000 * 109.46803 * 75.02772 * 17 16 14 32 32 H 0.96695 * 113.99642 * 60.00302 * 18 17 16 33 33 H 1.48500 * 109.99838 * 58.68327 * 19 17 16 34 34 H 1.48500 * 109.99794 * 179.97438 * 19 17 16 35 35 H 1.08003 * 119.92539 * 179.97438 * 20 16 14 36 36 H 1.08992 * 109.47399 * 59.99823 * 23 7 6 37 37 H 1.09004 * 109.46724 * 180.02562 * 23 7 6 38 38 H 1.08993 * 109.47194 * 59.99607 * 24 3 2 39 39 H 1.09002 * 109.46695 * 299.99621 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9708 1.0225 -0.1106 5 6 3.1182 -0.5817 1.3197 6 6 4.6482 -0.5816 1.3195 7 6 5.1581 -1.4332 0.1551 8 1 4.7949 -2.4549 0.2659 9 7 6.6231 -1.4326 0.1546 10 6 7.2977 -2.3106 0.9231 11 8 6.6903 -3.1034 1.6163 12 6 8.7746 -2.3104 0.9222 13 6 9.4752 -1.4058 0.1221 14 6 10.8564 -1.4081 0.1293 15 9 11.5358 -0.5307 -0.6411 16 6 11.5472 -2.3122 0.9212 17 6 13.0542 -2.3119 0.9194 18 8 13.5314 -3.5205 1.5141 19 14 13.6732 -2.1958 -0.8339 20 6 10.8604 -3.2142 1.7119 21 6 9.4778 -3.2201 1.7183 22 9 8.8077 -4.1019 2.4919 23 6 4.6479 -0.8507 -1.1645 24 6 3.1184 -0.8505 -1.1644 25 1 2.7546 0.0247 2.1492 26 1 2.7554 -1.6036 1.4302 27 1 5.0117 -0.9961 2.2598 28 1 5.0114 0.4401 1.2087 29 1 7.1077 -0.8003 -0.3988 30 1 8.9385 -0.7038 -0.4988 31 1 13.4180 -1.4577 1.4905 32 1 13.2457 -4.3232 1.0569 33 1 13.1577 -0.9588 -1.4736 34 1 15.1581 -2.1941 -0.8491 35 1 11.4050 -3.9161 2.3261 36 1 5.0111 0.1709 -1.2752 37 1 5.0109 -1.4577 -1.9939 38 1 2.7548 -0.4357 -2.1044 39 1 2.7555 -1.8724 -1.0537 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:58:43 Heat of formation + Delta-G solvation = -96.508696 kcal Electronic energy + Delta-G solvation = -26765.906833 eV Core-core repulsion = 22504.280947 eV Total energy + Delta-G solvation = -4261.625886 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.112 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -50.38746 -50.04088 -41.45838 -40.24420 -39.39857 -37.64941 -37.32819 -35.31096 -33.17725 -31.80473 -31.39045 -30.75181 -27.84920 -24.86442 -24.15250 -23.75282 -23.27528 -21.66920 -21.25210 -19.51585 -19.03922 -18.71422 -18.50569 -17.83341 -17.44886 -17.25439 -16.90496 -16.67049 -16.14522 -15.98881 -15.79495 -15.69838 -15.53095 -15.32081 -15.08580 -14.77765 -14.56037 -14.41789 -14.14952 -13.91194 -13.69179 -13.66910 -13.25529 -13.21411 -13.02644 -12.91163 -12.47320 -12.29687 -12.15008 -12.07055 -11.51883 -11.43480 -11.26718 -11.03452 -10.95438 -10.22515 -10.07866 -9.65946 -4.97036 -0.71556 -0.21987 1.18262 1.54376 1.68155 1.74535 1.78080 1.93729 2.02147 2.36346 2.85911 2.89034 2.95469 3.19584 3.25004 3.56780 3.58907 3.71273 3.75246 3.88030 4.02572 4.20883 4.23083 4.26996 4.37588 4.40476 4.44264 4.45533 4.53759 4.66588 4.73172 4.80965 4.84000 4.88321 5.05992 5.14119 5.19648 5.21299 5.34672 5.35692 5.46511 5.53590 6.43332 6.57952 6.65702 7.11446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.504 5.504 2 C 0.236 3.764 3 C 0.013 3.987 4 H 0.151 0.849 5 C -0.107 4.107 6 C -0.122 4.122 7 C 0.139 3.861 8 H 0.069 0.931 9 N -0.701 5.701 10 C 0.558 3.442 11 O -0.564 6.564 12 C -0.157 4.157 13 C -0.066 4.066 14 C 0.071 3.929 15 F -0.121 7.121 16 C -0.085 4.085 17 C -0.073 4.073 18 O -0.549 6.549 19 Si 0.764 3.236 20 C -0.119 4.119 21 C 0.137 3.863 22 F -0.129 7.129 23 C -0.114 4.114 24 C -0.107 4.107 25 H 0.079 0.921 26 H 0.061 0.939 27 H 0.051 0.949 28 H 0.096 0.904 29 H 0.417 0.583 30 H 0.186 0.814 31 H 0.127 0.873 32 H 0.400 0.600 33 H -0.250 1.250 34 H -0.306 1.306 35 H 0.171 0.829 36 H 0.105 0.895 37 H 0.088 0.912 38 H 0.092 0.908 39 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.674 2.714 -5.755 8.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.181 5.181 2 C -0.081 4.081 3 C -0.008 4.008 4 H 0.168 0.832 5 C -0.146 4.146 6 C -0.161 4.161 7 C 0.035 3.965 8 H 0.088 0.912 9 N -0.354 5.354 10 C 0.345 3.655 11 O -0.443 6.443 12 C -0.161 4.161 13 C -0.085 4.085 14 C 0.052 3.948 15 F -0.100 7.100 16 C -0.087 4.087 17 C -0.182 4.182 18 O -0.357 6.357 19 Si 0.667 3.333 20 C -0.137 4.137 21 C 0.116 3.884 22 F -0.107 7.107 23 C -0.152 4.152 24 C -0.146 4.146 25 H 0.097 0.903 26 H 0.080 0.920 27 H 0.070 0.930 28 H 0.114 0.886 29 H 0.256 0.744 30 H 0.203 0.797 31 H 0.144 0.856 32 H 0.251 0.749 33 H -0.176 1.176 34 H -0.234 1.234 35 H 0.189 0.811 36 H 0.123 0.877 37 H 0.106 0.894 38 H 0.111 0.889 39 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 4.209 3.036 -5.442 7.520 hybrid contribution 0.268 0.239 0.840 0.914 sum 4.477 3.275 -4.602 7.208 Atomic orbital electron populations 1.81310 1.15378 1.10979 1.10423 1.29908 0.95707 0.91156 0.91328 1.19273 0.78573 1.05109 0.97869 0.83199 1.21479 0.95564 1.01782 0.95788 1.21849 0.94283 1.01759 0.98162 1.21161 0.78183 1.00483 0.96643 0.91241 1.45796 1.07598 1.36611 1.45366 1.18070 0.86580 0.80906 0.79978 1.90878 1.70160 1.40609 1.42662 1.19841 0.93696 1.00233 1.02342 1.21323 0.91875 0.97805 0.97518 1.17317 0.90207 0.92157 0.95164 1.91600 1.78633 1.67127 1.72638 1.20451 0.97827 0.94999 0.95414 1.25192 0.89899 0.91448 1.11664 1.86501 1.75685 1.15688 1.57804 0.94284 0.77332 0.86146 0.75490 1.20861 0.90707 1.01457 1.00681 1.17982 0.90357 0.88830 0.91210 1.91591 1.80777 1.66047 1.72286 1.21749 0.94240 1.03916 0.95279 1.21507 0.95663 1.00080 0.97365 0.90278 0.92021 0.93047 0.88590 0.74367 0.79710 0.85618 0.74922 1.17558 1.23435 0.81128 0.87672 0.89390 0.88934 0.91640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -4.90 18.54 20.01 0.37 -4.53 16 2 C 0.24 0.19 14.65 89.44 1.31 1.50 16 3 C 0.01 -0.12 2.57 -12.60 -0.03 -0.15 16 4 H 0.15 -2.26 8.14 -2.39 -0.02 -2.28 16 5 C -0.11 0.73 5.16 30.60 0.16 0.89 16 6 C -0.12 0.88 5.49 30.59 0.17 1.05 16 7 C 0.14 -1.04 2.45 44.99 0.11 -0.93 16 8 H 0.07 -0.10 7.58 -2.39 -0.02 -0.12 16 9 N -0.70 5.35 5.03 -445.55 -2.24 3.11 16 10 C 0.56 0.55 7.73 86.74 0.67 1.22 16 11 O -0.56 -6.17 15.00 -3.95 -0.06 -6.23 16 12 C -0.16 0.30 5.88 -20.06 -0.12 0.18 16 13 C -0.07 0.53 9.52 22.57 0.21 0.74 16 14 C 0.07 -0.40 6.65 22.33 0.15 -0.25 16 15 F -0.12 0.43 12.80 44.97 0.58 1.01 16 16 C -0.09 0.43 5.14 -19.78 -0.10 0.33 16 17 C -0.07 0.37 2.96 71.23 0.21 0.59 16 18 O -0.55 2.66 11.63 -148.98 -1.73 0.93 16 19 Si 0.76 -3.98 30.81 68.60 2.11 -1.87 16 20 C -0.12 0.41 9.20 22.27 0.20 0.62 16 21 C 0.14 0.17 7.28 22.67 0.17 0.34 16 22 F -0.13 -1.05 15.55 44.97 0.70 -0.35 16 23 C -0.11 1.55 5.39 30.58 0.16 1.72 16 24 C -0.11 1.16 5.16 30.58 0.16 1.32 16 25 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 26 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 27 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 28 H 0.10 -1.12 8.14 -2.39 -0.02 -1.14 16 29 H 0.42 -6.27 6.63 -92.71 -0.61 -6.88 16 30 H 0.19 -2.90 6.40 -2.91 -0.02 -2.92 16 31 H 0.13 -0.54 7.96 -2.39 -0.02 -0.56 16 32 H 0.40 -5.26 8.42 -74.06 -0.62 -5.88 16 33 H -0.25 0.33 5.26 99.48 0.52 0.85 16 34 H -0.31 -0.96 7.11 99.48 0.71 -0.25 16 35 H 0.17 -0.97 7.06 -2.91 -0.02 -0.99 16 36 H 0.10 -1.94 8.14 -2.39 -0.02 -1.95 16 37 H 0.09 -1.23 8.14 -2.39 -0.02 -1.25 16 38 H 0.09 -1.12 8.14 -2.39 -0.02 -1.14 16 39 H 0.06 -0.51 8.14 -2.39 -0.02 -0.53 16 Total: 0.00 -27.54 334.28 2.90 -24.65 By element: Atomic # 1 Polarization: -25.64 SS G_CDS: -0.26 Total: -25.90 kcal Atomic # 6 Polarization: 5.74 SS G_CDS: 3.43 Total: 9.17 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -1.87 Total: -1.41 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -1.79 Total: -5.30 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 1.27 Total: 0.66 kcal Atomic # 14 Polarization: -3.98 SS G_CDS: 2.11 Total: -1.87 kcal Total: -27.54 2.90 -24.65 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.863 kcal (2) G-P(sol) polarization free energy of solvation -27.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.646 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds