Wall clock time and date at job start Sun Mar 7 2021 05:59:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 H 1.09001 * 109.46790 * 190.69611 * 3 2 1 5 5 C 1.52999 * 109.47278 * 310.69400 * 3 2 1 6 6 C 1.52997 * 109.47069 * 179.97438 * 5 3 2 7 7 C 1.52995 * 109.47410 * 299.99869 * 6 5 3 8 8 H 1.08995 * 109.47538 * 300.00489 * 7 6 5 9 9 N 1.46499 * 109.47403 * 180.02562 * 7 6 5 10 10 C 1.34771 * 120.00143 * 85.00114 * 9 7 6 11 11 O 1.21620 * 119.99874 * 0.02562 * 10 9 7 12 12 C 1.47294 * 119.99999 * 180.02562 * 10 9 7 13 13 C 1.39873 * 120.04804 * 359.97438 * 12 10 9 14 14 C 1.36426 * 120.18588 * 180.02562 * 13 12 10 15 15 C 1.39922 * 120.27871 * 0.02562 * 14 13 12 16 16 C 1.47569 * 119.95349 * 179.97438 * 15 14 13 17 17 C 1.36109 * 125.94731 * 359.97438 * 16 15 14 18 18 C 1.40795 * 106.73337 * 180.25127 * 17 16 15 19 19 C 1.34832 * 107.04954 * 359.62775 * 18 17 16 20 20 C 1.50702 * 125.65062 * 180.09766 * 19 18 17 21 21 O 1.42895 * 109.47468 * 65.30036 * 20 19 18 22 22 Si 1.86304 * 109.47179 * 185.29811 * 20 19 18 23 23 O 1.34226 * 108.69752 * 0.37982 * 19 18 17 24 24 C 1.39605 * 120.09206 * 0.24522 * 15 14 13 25 25 C 1.38287 * 119.80735 * 359.47886 * 24 15 14 26 26 O 1.35679 * 120.13340 * 180.22641 * 25 24 15 27 27 C 1.53008 * 109.46767 * 60.00111 * 7 6 5 28 28 C 1.52997 * 109.47224 * 299.99740 * 27 7 6 29 29 H 1.08997 * 109.47388 * 300.00463 * 5 3 2 30 30 H 1.09001 * 109.47038 * 60.00363 * 5 3 2 31 31 H 1.09008 * 109.46864 * 180.02562 * 6 5 3 32 32 H 1.09001 * 109.46886 * 60.00280 * 6 5 3 33 33 H 0.97010 * 119.99936 * 265.00438 * 9 7 6 34 34 H 1.07995 * 119.90593 * 359.97438 * 13 12 10 35 35 H 1.07995 * 119.86039 * 179.97438 * 14 13 12 36 36 H 1.08002 * 126.62860 * 359.97438 * 17 16 15 37 37 H 1.08005 * 126.47533 * 179.75634 * 18 17 16 38 38 H 1.08999 * 109.47385 * 305.29667 * 20 19 18 39 39 H 0.96707 * 113.99962 * 59.99205 * 21 20 19 40 40 H 1.48499 * 110.00338 * 179.97438 * 22 20 19 41 41 H 1.48498 * 110.00104 * 301.32187 * 22 20 19 42 42 H 1.07991 * 120.09495 * 179.71070 * 24 15 14 43 43 H 0.96706 * 113.99361 * 270.32341 * 26 25 24 44 44 H 1.09000 * 109.46647 * 60.00362 * 27 7 6 45 45 H 1.08998 * 109.46744 * 179.97438 * 27 7 6 46 46 H 1.08995 * 109.47098 * 179.97438 * 28 27 7 47 47 H 1.08996 * 109.47195 * 300.00568 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9709 1.0107 0.1907 5 6 3.1185 -0.9396 1.0937 6 6 4.6484 -0.9394 1.0932 7 6 5.1582 -1.4164 -0.2682 8 1 4.7949 -2.4263 -0.4587 9 7 6.6232 -1.4168 -0.2684 10 6 7.2969 -2.4806 0.2119 11 8 6.6886 -3.4406 0.6451 12 6 8.7698 -2.4807 0.2122 13 6 9.4703 -1.3775 -0.2863 14 6 10.8346 -1.3748 -0.2879 15 6 11.5428 -2.4748 0.2082 16 6 13.0185 -2.4645 0.2025 17 6 13.8087 -1.4549 -0.2544 18 6 15.1419 -1.8702 -0.0741 19 6 15.1017 -3.0963 0.4856 20 6 16.2995 -3.9305 0.8602 21 8 17.0254 -3.2796 1.9050 22 14 15.7312 -5.6043 1.4486 23 8 13.8180 -3.4532 0.6481 24 6 10.8554 -3.5845 0.7032 25 6 9.4726 -3.5888 0.7119 26 8 8.7978 -4.6618 1.1958 27 6 4.6477 -0.4761 -1.3619 28 6 3.1177 -0.4763 -1.3615 29 1 2.7550 -0.6001 2.0636 30 1 2.7557 -1.9496 0.9029 31 1 5.0121 -1.6097 1.8722 32 1 5.0117 0.0705 1.2837 33 1 7.1083 -0.6512 -0.6142 34 1 8.9297 -0.5257 -0.6718 35 1 11.3702 -0.5203 -0.6744 36 1 13.4771 -0.5183 -0.6778 37 1 16.0291 -1.3114 -0.3330 38 1 16.9448 -4.0511 -0.0099 39 1 16.5118 -3.1390 2.7122 40 1 16.9032 -6.4369 1.8206 41 1 14.8251 -5.4518 2.6152 42 1 11.4020 -4.4355 1.0818 43 1 8.6026 -5.3362 0.5307 44 1 5.0110 0.5338 -1.1714 45 1 5.0112 -0.8157 -2.3317 46 1 2.7541 0.1939 -2.1403 47 1 2.7545 -1.4862 -1.5519 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:59:08 Heat of formation + Delta-G solvation = -40.394104 kcal Electronic energy + Delta-G solvation = -31764.399708 eV Core-core repulsion = 27266.534661 eV Total energy + Delta-G solvation = -4497.865048 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.145 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.78103 -41.68548 -40.49965 -39.20289 -38.22946 -37.87855 -37.19317 -35.23847 -34.28492 -33.54535 -32.07868 -31.48928 -31.09329 -30.18844 -27.13002 -25.09250 -24.18094 -24.02748 -23.90059 -22.45001 -21.85696 -21.46974 -21.26763 -19.76686 -18.89573 -18.78701 -18.59166 -17.72593 -17.58362 -17.49129 -16.68723 -16.51070 -16.36446 -16.12344 -15.88379 -15.60383 -15.57006 -15.39859 -14.93141 -14.82937 -14.51699 -14.44067 -14.29217 -14.05944 -13.91396 -13.81807 -13.72530 -13.66004 -13.54649 -13.48833 -13.10225 -12.98498 -12.78783 -12.45123 -12.35852 -12.33994 -12.08697 -11.85981 -11.69063 -11.45659 -11.17805 -10.87470 -10.79190 -10.66580 -10.13614 -10.00615 -9.06419 -5.03669 -0.82954 0.06438 0.61374 1.06880 1.39132 1.41501 1.66932 1.78346 1.81398 1.88537 1.94198 1.98784 2.59878 2.84832 2.97346 3.10693 3.29168 3.40963 3.47859 3.49477 3.60715 3.79951 3.80794 3.85169 3.89644 3.94421 3.99219 4.11421 4.14059 4.19182 4.23975 4.26797 4.33635 4.45802 4.52230 4.57676 4.62641 4.72263 4.77214 4.79828 4.83928 4.89202 4.94621 4.96184 5.03014 5.09679 5.13615 5.17067 5.33692 5.39044 5.42858 5.90624 6.18293 6.39978 6.59601 6.65154 7.18242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.431 5.431 2 C 0.206 3.794 3 C 0.007 3.993 4 H 0.116 0.884 5 C -0.110 4.110 6 C -0.129 4.129 7 C 0.143 3.857 8 H 0.094 0.906 9 N -0.726 5.726 10 C 0.560 3.440 11 O -0.516 6.516 12 C -0.166 4.166 13 C -0.064 4.064 14 C -0.117 4.117 15 C 0.030 3.970 16 C 0.023 3.977 17 C -0.177 4.177 18 C -0.173 4.173 19 C -0.043 4.043 20 C -0.034 4.034 21 O -0.520 6.520 22 Si 0.697 3.303 23 O -0.162 6.162 24 C -0.141 4.141 25 C 0.179 3.821 26 O -0.474 6.474 27 C -0.125 4.125 28 C -0.108 4.108 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.399 0.601 34 H 0.137 0.863 35 H 0.139 0.861 36 H 0.156 0.844 37 H 0.156 0.844 38 H 0.138 0.862 39 H 0.381 0.619 40 H -0.248 1.248 41 H -0.255 1.255 42 H 0.143 0.857 43 H 0.399 0.601 44 H 0.076 0.924 45 H 0.079 0.921 46 H 0.080 0.920 47 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.878 2.790 -4.882 7.444 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.106 5.106 2 C -0.112 4.112 3 C -0.015 4.015 4 H 0.134 0.866 5 C -0.149 4.149 6 C -0.167 4.167 7 C 0.039 3.961 8 H 0.112 0.888 9 N -0.378 5.378 10 C 0.347 3.653 11 O -0.391 6.391 12 C -0.169 4.169 13 C -0.083 4.083 14 C -0.135 4.135 15 C 0.030 3.970 16 C -0.027 4.027 17 C -0.196 4.196 18 C -0.192 4.192 19 C -0.094 4.094 20 C -0.144 4.144 21 O -0.327 6.327 22 Si 0.596 3.404 23 O -0.059 6.059 24 C -0.160 4.160 25 C 0.132 3.868 26 O -0.286 6.286 27 C -0.163 4.163 28 C -0.147 4.147 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.090 0.910 33 H 0.234 0.766 34 H 0.154 0.846 35 H 0.156 0.844 36 H 0.174 0.826 37 H 0.173 0.827 38 H 0.156 0.844 39 H 0.229 0.771 40 H -0.172 1.172 41 H -0.179 1.179 42 H 0.161 0.839 43 H 0.258 0.742 44 H 0.094 0.906 45 H 0.098 0.902 46 H 0.099 0.901 47 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 3.077 1.508 -3.686 5.033 hybrid contribution 0.834 1.333 0.189 1.584 sum 3.911 2.841 -3.497 5.966 Atomic orbital electron populations 1.81288 1.12983 1.08344 1.07962 1.29165 0.95066 0.93443 0.93555 1.18993 0.81375 1.03026 0.98065 0.86591 1.21534 0.95595 0.99816 0.97939 1.21929 0.94453 1.02551 0.97808 1.21063 0.78895 1.01193 0.94993 0.88823 1.45968 1.07173 1.19934 1.64756 1.17961 0.86668 0.82794 0.77863 1.90854 1.69471 1.33959 1.44851 1.20493 0.93670 0.97236 1.05540 1.20811 0.93934 0.96839 0.96689 1.20705 0.93855 0.97872 1.01023 1.17758 0.86913 0.94461 0.97879 1.20334 0.89956 0.88332 1.04068 1.21912 0.92445 1.00400 1.04855 1.21586 0.98232 0.95887 1.03512 1.22941 0.83297 0.97695 1.05426 1.24357 0.90371 1.04395 0.95281 1.86667 1.40545 1.79963 1.25536 0.94487 0.81759 0.76773 0.87354 1.83950 1.15983 1.40760 1.65182 1.21602 0.93370 0.99506 1.01496 1.18292 0.89013 0.88088 0.91411 1.84780 1.75986 1.30061 1.37742 1.21801 0.95208 1.00214 0.99086 1.21508 0.95032 1.03174 0.95034 0.90358 0.90505 0.90370 0.91022 0.76576 0.84559 0.84366 0.82608 0.82670 0.84413 0.77070 1.17173 1.17874 0.83877 0.74219 0.90567 0.90235 0.90102 0.90414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.90 18.54 42.15 0.78 -1.12 16 2 C 0.21 0.11 14.65 -20.76 -0.30 -0.19 16 3 C 0.01 -0.02 2.57 -93.40 -0.24 -0.26 16 4 H 0.12 -0.64 8.14 -51.93 -0.42 -1.06 16 5 C -0.11 0.33 5.16 -26.73 -0.14 0.20 16 6 C -0.13 0.37 5.49 -26.74 -0.15 0.22 16 7 C 0.14 -0.43 2.45 -67.93 -0.17 -0.60 16 8 H 0.09 -0.09 7.57 -51.93 -0.39 -0.49 16 9 N -0.73 2.03 5.03 -54.92 -0.28 1.75 16 10 C 0.56 0.36 7.72 -12.58 -0.10 0.27 16 11 O -0.52 -2.24 14.80 -16.69 -0.25 -2.48 16 12 C -0.17 0.04 5.89 -104.79 -0.62 -0.58 16 13 C -0.06 0.19 9.47 -39.62 -0.38 -0.19 16 14 C -0.12 0.28 9.48 -39.60 -0.38 -0.09 16 15 C 0.03 -0.01 5.87 -104.95 -0.62 -0.63 16 16 C 0.02 0.01 7.02 -36.54 -0.26 -0.25 16 17 C -0.18 0.11 10.26 -39.38 -0.40 -0.30 16 18 C -0.17 0.02 10.78 -39.82 -0.43 -0.41 16 19 C -0.04 0.00 6.21 -35.52 -0.22 -0.22 16 20 C -0.03 0.04 2.98 36.01 0.11 0.15 16 21 O -0.52 -0.07 12.88 -35.23 -0.45 -0.52 16 22 Si 0.70 -0.84 32.11 -169.99 -5.46 -6.30 16 23 O -0.16 -0.14 8.79 4.72 0.04 -0.10 16 24 C -0.14 -0.03 9.65 -39.05 -0.38 -0.40 16 25 C 0.18 0.15 6.71 -38.75 -0.26 -0.11 16 26 O -0.47 -0.80 11.56 -40.69 -0.47 -1.27 16 27 C -0.13 0.66 5.39 -26.73 -0.14 0.51 16 28 C -0.11 0.48 5.16 -26.73 -0.14 0.34 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.03 8.14 -51.92 -0.42 -0.45 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.40 -2.22 6.61 -40.82 -0.27 -2.49 16 34 H 0.14 -0.85 6.37 -52.49 -0.33 -1.18 16 35 H 0.14 -0.65 6.95 -52.49 -0.36 -1.01 16 36 H 0.16 -0.47 7.24 -52.49 -0.38 -0.85 16 37 H 0.16 -0.20 8.06 -52.48 -0.42 -0.62 16 38 H 0.14 -0.37 7.96 -51.93 -0.41 -0.78 16 39 H 0.38 -0.94 8.70 45.56 0.40 -0.54 16 40 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 41 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 42 H 0.14 -0.04 7.90 -52.49 -0.41 -0.45 16 43 H 0.40 -0.84 9.06 45.56 0.41 -0.43 16 44 H 0.08 -0.50 8.14 -51.93 -0.42 -0.92 16 45 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 46 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 47 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 400.53 15.07 6.04 6.04 Total: 0.00 -11.63 400.53 -10.43 -22.07 By element: Atomic # 1 Polarization: -10.34 SS G_CDS: -5.19 Total: -15.52 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -5.20 Total: -2.54 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: 0.51 Total: 0.63 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -1.13 Total: -4.37 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.46 Total: -6.30 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.63 -10.43 -22.07 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.328 kcal (2) G-P(sol) polarization free energy of solvation -11.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds