Wall clock time and date at job start Sun Mar 7 2021 06:00:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 H 1.08996 * 109.46865 * 107.92558 * 3 2 1 5 5 C 1.52996 * 109.47098 * 227.92790 * 3 2 1 6 6 C 1.52997 * 109.47131 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.46991 * 299.99311 * 6 5 3 8 8 H 1.08993 * 109.47839 * 300.00447 * 7 6 5 9 9 N 1.46504 * 109.47050 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99637 * 85.00741 * 9 7 6 11 11 O 1.21284 * 119.99852 * 359.97438 * 10 9 7 12 12 C 1.50698 * 119.99873 * 180.02562 * 10 9 7 13 13 O 1.42902 * 109.46874 * 179.97438 * 12 10 9 14 14 C 1.35907 * 116.99952 * 179.97438 * 13 12 10 15 15 C 1.38708 * 120.05575 * 179.72458 * 14 13 12 16 16 C 1.50702 * 120.02751 * 0.02562 * 15 14 13 17 17 O 1.42902 * 109.46872 * 284.99670 * 16 15 14 18 18 Si 1.86308 * 109.47118 * 164.99736 * 16 15 14 19 19 C 1.38169 * 119.94123 * 179.67616 * 15 14 13 20 20 C 1.38242 * 120.05683 * 0.62364 * 19 15 14 21 21 C 1.38288 * 120.10741 * 359.67469 * 20 19 15 22 22 C 1.38122 * 120.05834 * 0.02562 * 21 20 19 23 23 C 1.53006 * 109.46626 * 60.00378 * 7 6 5 24 24 C 1.52997 * 109.47127 * 299.99539 * 23 7 6 25 25 H 1.09001 * 109.46993 * 300.00258 * 5 3 2 26 26 H 1.09000 * 109.47380 * 59.99364 * 5 3 2 27 27 H 1.09002 * 109.47153 * 179.97438 * 6 5 3 28 28 H 1.08993 * 109.47194 * 60.00154 * 6 5 3 29 29 H 0.96998 * 120.00034 * 265.00623 * 9 7 6 30 30 H 1.09002 * 109.46846 * 299.99469 * 12 10 9 31 31 H 1.08996 * 109.47759 * 60.00024 * 12 10 9 32 32 H 1.08997 * 109.47362 * 44.99786 * 16 15 14 33 33 H 0.96695 * 113.99913 * 299.99842 * 17 16 15 34 34 H 1.48497 * 109.99910 * 179.97438 * 18 16 15 35 35 H 1.48496 * 109.99773 * 301.32037 * 18 16 15 36 36 H 1.08002 * 119.96942 * 180.31723 * 19 15 14 37 37 H 1.08001 * 119.94402 * 179.69939 * 20 19 15 38 38 H 1.08000 * 119.97134 * 180.02562 * 21 20 19 39 39 H 1.08001 * 120.02926 * 179.97438 * 22 21 20 40 40 H 1.09001 * 109.46801 * 59.99811 * 23 7 6 41 41 H 1.09001 * 109.46998 * 179.97438 * 23 7 6 42 42 H 1.09002 * 109.47153 * 180.02562 * 24 23 7 43 43 H 1.08996 * 109.46952 * 300.00302 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9712 0.3171 -0.9778 5 6 3.1176 0.9674 1.0707 6 6 4.6476 0.9686 1.0703 7 6 5.1587 -0.4416 1.3718 8 1 4.7959 -0.7584 2.3496 9 7 6.6238 -0.4406 1.3708 10 6 7.2981 -0.0975 2.4862 11 8 6.6921 0.2109 3.4905 12 6 8.8051 -0.0959 2.4850 13 8 9.2819 0.3004 3.7725 14 6 10.6294 0.3536 3.9419 15 6 11.1613 0.7360 5.1645 16 6 10.2454 1.0925 6.3070 17 8 9.6784 2.3840 6.0777 18 14 11.2157 1.1138 7.8973 19 6 12.5314 0.7829 5.3361 20 6 13.3721 0.4614 4.2868 21 6 12.8442 0.0858 3.0651 22 6 11.4751 0.0314 2.8903 23 6 4.6491 -1.4085 0.3010 24 6 3.1192 -1.4096 0.3014 25 1 2.7538 1.9722 0.8558 26 1 2.7544 0.6510 2.0485 27 1 5.0106 1.6577 1.8329 28 1 5.0104 1.2854 0.0926 29 1 7.1084 -0.6869 0.5675 30 1 9.1692 -1.0972 2.2547 31 1 9.1672 0.6045 1.7325 32 1 9.4480 0.3529 6.3779 33 1 10.3318 3.0930 6.0039 34 1 10.3240 1.4647 9.0317 35 1 11.8369 -0.2146 8.1310 36 1 12.9461 1.0756 6.2895 37 1 14.4428 0.5033 4.4215 38 1 13.5029 -0.1653 2.2469 39 1 11.0634 -0.2616 1.9358 40 1 5.0120 -1.0917 -0.6768 41 1 5.0136 -2.4131 0.5155 42 1 2.7561 -2.0987 -0.4611 43 1 2.7564 -1.7263 1.2792 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:00:54 Heat of formation + Delta-G solvation = -56.591093 kcal Electronic energy + Delta-G solvation = -25816.889798 eV Core-core repulsion = 22021.683009 eV Total energy + Delta-G solvation = -3795.206789 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.63265 -40.91885 -39.62539 -38.44855 -37.47217 -37.32618 -35.25133 -32.72515 -31.84020 -31.70420 -30.89100 -28.91123 -26.65456 -24.62433 -23.79971 -23.26836 -22.57355 -21.54521 -21.11415 -19.44510 -18.75723 -18.38050 -17.95215 -17.45215 -17.21601 -16.82936 -16.53176 -16.14393 -15.81223 -15.43644 -15.34620 -15.30041 -14.97684 -14.88292 -14.78057 -14.53171 -14.19949 -13.94594 -13.78068 -13.71114 -13.44397 -13.27960 -13.05611 -12.98058 -12.38216 -12.30294 -12.20359 -12.14495 -12.11248 -12.04406 -11.74088 -11.47121 -11.29473 -10.93296 -10.36527 -10.11756 -9.92748 -9.18133 -5.04717 0.27633 0.45392 1.29793 1.47689 1.53646 1.62782 1.71219 1.75241 1.96233 2.61854 2.74751 2.92440 3.55177 3.58344 3.67327 3.71014 3.78517 3.93867 3.99326 4.01283 4.08533 4.16348 4.18775 4.21620 4.34935 4.36933 4.39522 4.40187 4.49718 4.55773 4.66717 4.69330 4.84440 5.00984 5.01957 5.10045 5.15640 5.17322 5.31644 5.32218 5.33423 5.41667 5.51088 5.56806 5.80681 6.32426 6.52916 6.54800 6.82995 7.18989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.503 5.503 2 C 0.236 3.764 3 C 0.014 3.986 4 H 0.153 0.847 5 C -0.108 4.108 6 C -0.121 4.121 7 C 0.140 3.860 8 H 0.061 0.939 9 N -0.703 5.703 10 C 0.511 3.489 11 O -0.572 6.572 12 C 0.035 3.965 13 O -0.316 6.316 14 C 0.126 3.874 15 C -0.172 4.172 16 C -0.072 4.072 17 O -0.557 6.557 18 Si 0.793 3.207 19 C -0.080 4.080 20 C -0.155 4.155 21 C -0.076 4.076 22 C -0.213 4.213 23 C -0.112 4.112 24 C -0.108 4.108 25 H 0.080 0.920 26 H 0.057 0.943 27 H 0.047 0.953 28 H 0.099 0.901 29 H 0.423 0.577 30 H 0.121 0.879 31 H 0.123 0.877 32 H 0.079 0.921 33 H 0.391 0.609 34 H -0.305 1.305 35 H -0.282 1.282 36 H 0.156 0.844 37 H 0.154 0.846 38 H 0.154 0.846 39 H 0.155 0.845 40 H 0.108 0.892 41 H 0.085 0.915 42 H 0.094 0.906 43 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.550 -1.095 -8.181 14.196 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.180 5.180 2 C -0.081 4.081 3 C -0.007 4.007 4 H 0.170 0.830 5 C -0.147 4.147 6 C -0.160 4.160 7 C 0.036 3.964 8 H 0.079 0.921 9 N -0.357 5.357 10 C 0.297 3.703 11 O -0.450 6.450 12 C -0.043 4.043 13 O -0.229 6.229 14 C 0.080 3.920 15 C -0.173 4.173 16 C -0.181 4.181 17 O -0.364 6.364 18 Si 0.698 3.302 19 C -0.097 4.097 20 C -0.173 4.173 21 C -0.094 4.094 22 C -0.231 4.231 23 C -0.150 4.150 24 C -0.147 4.147 25 H 0.098 0.902 26 H 0.076 0.924 27 H 0.066 0.934 28 H 0.117 0.883 29 H 0.261 0.739 30 H 0.139 0.861 31 H 0.140 0.860 32 H 0.096 0.904 33 H 0.240 0.760 34 H -0.233 1.233 35 H -0.209 1.209 36 H 0.173 0.827 37 H 0.171 0.829 38 H 0.171 0.829 39 H 0.172 0.828 40 H 0.126 0.874 41 H 0.104 0.896 42 H 0.112 0.888 43 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 8.775 -1.524 -6.539 11.049 hybrid contribution -0.444 -0.448 -0.431 0.764 sum 8.331 -1.972 -6.970 11.040 Atomic orbital electron populations 1.81310 1.15334 1.10454 1.10891 1.29902 0.95703 0.91339 0.91190 1.19258 0.78603 0.98733 1.04108 0.82960 1.21482 0.95643 0.99577 0.97996 1.21839 0.94248 0.96432 1.03436 1.21105 0.78611 0.96261 1.00450 0.92102 1.45708 1.07268 1.68932 1.13819 1.20533 0.89734 0.76549 0.83476 1.90786 1.70954 1.48396 1.34904 1.22738 0.91349 1.04469 0.85711 1.86193 1.19799 1.83408 1.33492 1.19108 0.81869 0.96249 0.94749 1.19841 0.95025 1.07900 0.94565 1.25159 1.00320 0.86937 1.05646 1.86541 1.37957 1.16370 1.95559 0.94052 0.80980 0.83410 0.71711 1.21105 0.90615 0.97729 1.00233 1.21447 1.01376 1.01555 0.92880 1.21415 0.94312 0.95445 0.98234 1.21590 0.94805 1.07598 0.99120 1.21739 0.94151 0.99594 0.99470 1.21524 0.95741 0.93951 1.03486 0.90169 0.92380 0.93423 0.88257 0.73901 0.86123 0.85954 0.90371 0.76023 1.23323 1.20869 0.82704 0.82875 0.82858 0.82760 0.87390 0.89625 0.88792 0.91950 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -5.34 18.54 20.01 0.37 -4.97 16 2 C 0.24 0.43 14.65 89.44 1.31 1.74 16 3 C 0.01 -0.11 2.56 -12.60 -0.03 -0.14 16 4 H 0.15 -2.19 8.14 -2.39 -0.02 -2.21 16 5 C -0.11 0.56 5.16 30.59 0.16 0.72 16 6 C -0.12 0.68 5.49 30.59 0.17 0.85 16 7 C 0.14 -0.80 2.45 44.99 0.11 -0.69 16 8 H 0.06 0.09 7.58 -2.39 -0.02 0.07 16 9 N -0.70 4.91 5.08 -442.52 -2.25 2.66 16 10 C 0.51 1.17 7.87 87.66 0.69 1.86 16 11 O -0.57 -8.67 16.16 15.99 0.26 -8.41 16 12 C 0.04 -0.09 5.22 71.24 0.37 0.28 16 13 O -0.32 -2.43 9.00 -73.46 -0.66 -3.09 16 14 C 0.13 0.52 6.66 22.50 0.15 0.67 16 15 C -0.17 -0.66 5.27 -19.77 -0.10 -0.76 16 16 C -0.07 -0.47 2.38 71.24 0.17 -0.30 16 17 O -0.56 -4.51 12.88 -148.98 -1.92 -6.42 16 18 Si 0.79 1.10 29.92 68.60 2.05 3.15 16 19 C -0.08 0.15 8.66 22.25 0.19 0.34 16 20 C -0.15 0.66 10.04 22.28 0.22 0.88 16 21 C -0.08 0.35 10.04 22.25 0.22 0.58 16 22 C -0.21 0.54 9.04 22.36 0.20 0.74 16 23 C -0.11 1.38 5.39 30.60 0.16 1.55 16 24 C -0.11 1.03 5.16 30.59 0.16 1.19 16 25 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 26 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 27 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 28 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 29 H 0.42 -6.52 8.60 -92.71 -0.80 -7.31 16 30 H 0.12 -1.09 7.66 -2.39 -0.02 -1.11 16 31 H 0.12 -1.11 7.66 -2.39 -0.02 -1.13 16 32 H 0.08 0.99 7.83 -2.39 -0.02 0.97 16 33 H 0.39 -0.74 8.70 -74.06 -0.64 -1.39 16 34 H -0.30 -2.90 7.11 99.48 0.71 -2.20 16 35 H -0.28 -1.48 7.11 99.48 0.71 -0.77 16 36 H 0.16 -1.11 5.12 -2.91 -0.01 -1.12 16 37 H 0.15 -1.42 8.06 -2.91 -0.02 -1.44 16 38 H 0.15 -1.53 8.06 -2.91 -0.02 -1.55 16 39 H 0.15 -1.37 6.30 -2.91 -0.02 -1.39 16 40 H 0.11 -1.91 8.14 -2.39 -0.02 -1.92 16 41 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 42 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 43 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 Total: 0.00 -35.89 360.68 1.65 -34.23 By element: Atomic # 1 Polarization: -26.28 SS G_CDS: -0.36 Total: -26.64 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 4.16 Total: 9.49 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -1.88 Total: -2.31 kcal Atomic # 8 Polarization: -15.60 SS G_CDS: -2.32 Total: -17.92 kcal Atomic # 14 Polarization: 1.10 SS G_CDS: 2.05 Total: 3.15 kcal Total: -35.89 1.65 -34.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.358 kcal (2) G-P(sol) polarization free energy of solvation -35.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds