Wall clock time and date at job start Sun Mar 7 2021 06:01:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 H 1.09003 * 109.46611 * 206.61961 * 3 2 1 5 5 C 1.52998 * 109.47280 * 326.62135 * 3 2 1 6 6 C 1.53003 * 109.46942 * 179.97438 * 5 3 2 7 7 C 1.52996 * 109.47234 * 300.00567 * 6 5 3 8 8 H 1.09003 * 109.46883 * 299.99300 * 7 6 5 9 9 N 1.46499 * 109.47005 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99970 * 154.99482 * 9 7 6 11 11 O 1.21282 * 120.00088 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00151 * 179.97438 * 10 9 7 13 13 C 1.52998 * 109.47216 * 180.02562 * 12 10 9 14 14 O 1.42904 * 109.47021 * 180.02562 * 13 12 10 15 15 C 1.35895 * 116.99884 * 180.02562 * 14 13 12 16 16 C 1.38736 * 120.05789 * 180.02562 * 15 14 13 17 17 C 1.38134 * 119.94971 * 180.02562 * 16 15 14 18 18 C 1.38267 * 120.05527 * 359.97264 * 17 16 15 19 19 C 1.50702 * 119.94890 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47007 * 300.00359 * 19 18 17 21 21 Si 1.86300 * 109.47301 * 179.97438 * 19 18 17 22 22 C 1.38273 * 120.10994 * 0.29777 * 18 17 16 23 23 C 1.38148 * 120.05257 * 359.44983 * 22 18 17 24 24 C 1.52998 * 109.47619 * 59.99848 * 7 6 5 25 25 C 1.53003 * 109.46986 * 299.99772 * 24 7 6 26 26 H 1.09005 * 109.46710 * 60.00381 * 5 3 2 27 27 H 1.08993 * 109.47318 * 300.00186 * 5 3 2 28 28 H 1.08995 * 109.47001 * 179.97438 * 6 5 3 29 29 H 1.09003 * 109.46614 * 60.00031 * 6 5 3 30 30 H 0.97003 * 119.99998 * 334.99892 * 9 7 6 31 31 H 1.09002 * 109.46787 * 60.00462 * 12 10 9 32 32 H 1.09003 * 109.47247 * 300.00517 * 12 10 9 33 33 H 1.09002 * 109.47082 * 60.00377 * 13 12 10 34 34 H 1.08997 * 109.47064 * 299.99840 * 13 12 10 35 35 H 1.08005 * 120.02336 * 359.97438 * 16 15 14 36 36 H 1.07997 * 119.97664 * 179.97438 * 17 16 15 37 37 H 1.09004 * 109.46923 * 59.99928 * 19 18 17 38 38 H 0.96700 * 113.99509 * 299.99566 * 20 19 18 39 39 H 1.48498 * 109.99634 * 58.68378 * 21 19 18 40 40 H 1.48502 * 109.99691 * 180.02562 * 21 19 18 41 41 H 1.07998 * 119.96907 * 179.70795 * 22 18 17 42 42 H 1.07995 * 120.02276 * 180.24633 * 23 22 18 43 43 H 1.08997 * 109.47019 * 59.99652 * 24 7 6 44 44 H 1.08997 * 109.47405 * 180.02562 * 24 7 6 45 45 H 1.09000 * 109.47511 * 300.00475 * 25 24 7 46 46 H 1.08997 * 109.47418 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9709 0.9196 0.4605 5 6 3.1186 -1.2036 0.7936 6 6 4.6487 -1.2032 0.7930 7 6 5.1581 -1.2882 -0.6471 8 1 4.7950 -2.2071 -1.1074 9 7 6.6231 -1.2872 -0.6477 10 6 7.2970 -1.8418 -1.6747 11 8 6.6906 -2.3413 -2.5987 12 6 8.8040 -1.8403 -1.6756 13 6 9.3140 -2.5254 -2.9449 14 8 10.7431 -2.5245 -2.9454 15 6 11.3600 -3.0990 -4.0113 16 6 12.7454 -3.1337 -4.0767 17 6 13.3701 -3.7178 -5.1614 18 6 12.6160 -4.2682 -6.1813 19 6 13.3001 -4.9053 -7.3633 20 8 14.1162 -3.9344 -8.0216 21 14 12.0170 -5.5476 -8.5515 22 6 11.2351 -4.2299 -6.1212 23 6 10.6056 -3.6515 -5.0360 24 6 4.6476 -0.0839 -1.4407 25 6 3.1175 -0.0844 -1.4403 26 1 2.7557 -2.1225 0.3330 27 1 2.7553 -1.1433 1.8194 28 1 5.0124 -2.0609 1.3587 29 1 5.0118 -0.2843 1.2533 30 1 7.1081 -0.8874 0.0912 31 1 9.1684 -2.3783 -0.8004 32 1 9.1664 -0.8126 -1.6471 33 1 8.9497 -1.9870 -3.8199 34 1 8.9517 -3.5530 -2.9737 35 1 13.3349 -2.7036 -3.2805 36 1 14.4485 -3.7447 -5.2129 37 1 13.9232 -5.7314 -7.0206 38 1 13.6268 -3.1693 -8.3535 39 1 11.1405 -4.4366 -9.0017 40 1 12.6790 -6.1789 -9.7214 41 1 10.6483 -4.6563 -6.9214 42 1 9.5270 -3.6255 -4.9878 43 1 5.0108 0.8350 -0.9804 44 1 5.0102 -0.1447 -2.4668 45 1 2.7543 -1.0033 -1.9004 46 1 2.7537 0.7738 -2.0052 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:01:04 Heat of formation + Delta-G solvation = -65.301178 kcal Electronic energy + Delta-G solvation = -26748.061275 eV Core-core repulsion = 22796.939169 eV Total energy + Delta-G solvation = -3951.122105 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.50611 -41.10479 -39.80720 -39.11751 -37.35119 -37.20538 -35.29606 -33.50539 -32.13387 -32.08111 -31.55763 -30.76030 -26.69793 -25.78606 -24.40160 -24.07485 -23.30204 -22.17095 -21.63102 -21.19525 -19.51287 -18.87730 -18.41171 -17.85315 -17.60147 -17.51421 -16.93372 -16.34326 -16.33853 -16.09623 -15.84126 -15.59073 -15.57633 -14.96854 -14.89000 -14.71798 -14.64926 -14.45341 -14.23221 -14.06748 -13.89522 -13.75942 -13.54465 -13.41270 -13.17517 -12.91991 -12.88501 -12.50142 -12.41636 -12.38336 -12.17382 -12.04592 -11.81479 -11.74335 -11.55214 -11.52058 -11.01846 -10.56067 -10.23832 -9.99859 -9.17138 -4.93629 0.32648 0.35029 1.32221 1.46078 1.61760 1.62249 1.74895 1.78435 1.98814 2.37818 2.69711 2.81991 3.35878 3.40826 3.43478 3.47090 3.70387 3.74540 3.77762 3.79571 3.83893 3.90513 3.94019 3.98073 4.08665 4.13462 4.18819 4.24017 4.30075 4.37993 4.42140 4.52727 4.54412 4.57049 4.61038 4.75042 4.75600 4.77748 4.84377 4.89576 4.98997 5.02447 5.09876 5.21360 5.30973 5.32226 5.52751 5.74233 6.26877 6.36737 6.43704 6.56197 7.03027 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.430 5.430 2 C 0.205 3.795 3 C 0.007 3.993 4 H 0.116 0.884 5 C -0.109 4.109 6 C -0.125 4.125 7 C 0.141 3.859 8 H 0.093 0.907 9 N -0.726 5.726 10 C 0.521 3.479 11 O -0.536 6.536 12 C -0.142 4.142 13 C 0.073 3.927 14 O -0.316 6.316 15 C 0.138 3.862 16 C -0.151 4.151 17 C -0.053 4.053 18 C -0.157 4.157 19 C -0.069 4.069 20 O -0.531 6.531 21 Si 0.680 3.320 22 C -0.075 4.075 23 C -0.203 4.203 24 C -0.128 4.128 25 C -0.110 4.110 26 H 0.077 0.923 27 H 0.081 0.919 28 H 0.079 0.921 29 H 0.076 0.924 30 H 0.403 0.597 31 H 0.108 0.892 32 H 0.107 0.893 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.117 0.883 38 H 0.376 0.624 39 H -0.261 1.261 40 H -0.257 1.257 41 H 0.129 0.871 42 H 0.134 0.866 43 H 0.072 0.928 44 H 0.076 0.924 45 H 0.076 0.924 46 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.621 0.817 4.718 5.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.105 5.105 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.134 0.866 5 C -0.148 4.148 6 C -0.163 4.163 7 C 0.036 3.964 8 H 0.111 0.889 9 N -0.377 5.377 10 C 0.308 3.692 11 O -0.412 6.412 12 C -0.182 4.182 13 C -0.002 4.002 14 O -0.230 6.230 15 C 0.092 3.908 16 C -0.169 4.169 17 C -0.071 4.071 18 C -0.157 4.157 19 C -0.179 4.179 20 O -0.337 6.337 21 Si 0.582 3.418 22 C -0.093 4.093 23 C -0.221 4.221 24 C -0.167 4.167 25 C -0.149 4.149 26 H 0.096 0.904 27 H 0.099 0.901 28 H 0.098 0.902 29 H 0.095 0.905 30 H 0.238 0.762 31 H 0.126 0.874 32 H 0.125 0.875 33 H 0.091 0.909 34 H 0.092 0.908 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.135 0.865 38 H 0.223 0.777 39 H -0.186 1.186 40 H -0.182 1.182 41 H 0.146 0.854 42 H 0.152 0.848 43 H 0.090 0.910 44 H 0.095 0.905 45 H 0.095 0.905 46 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.666 0.162 3.562 3.627 hybrid contribution 0.775 1.382 0.144 1.591 sum 1.441 1.544 3.706 4.266 Atomic orbital electron populations 1.81291 1.12976 1.08213 1.08008 1.29158 0.95060 0.93513 0.93557 1.18989 0.81404 1.02029 0.99021 0.86575 1.21514 0.95034 0.97290 1.00963 1.21796 0.95209 1.03697 0.95593 1.21089 0.79012 1.00005 0.96265 0.88856 1.46013 1.07262 1.60569 1.23878 1.20293 0.89408 0.77429 0.82103 1.90761 1.70401 1.45057 1.35025 1.21479 0.92177 1.04517 1.00044 1.22430 0.77890 1.01805 0.98086 1.85975 1.21224 1.74747 1.41055 1.18988 0.92215 0.93035 0.86535 1.20503 0.91319 1.04584 1.00529 1.20828 1.00193 0.94610 0.91511 1.20186 0.93593 1.03799 0.98157 1.24934 1.02192 0.94336 0.96427 1.86592 1.36763 1.34259 1.76126 0.95060 0.79654 0.86272 0.80810 1.20811 0.93701 0.97317 0.97458 1.21263 1.00539 1.04707 0.95613 1.21923 0.94547 0.98423 1.01795 1.21538 0.95555 1.04044 0.93777 0.90430 0.90063 0.90222 0.90512 0.76201 0.87420 0.87464 0.90929 0.90803 0.84873 0.84901 0.86471 0.77686 1.18578 1.18246 0.85351 0.84789 0.90963 0.90485 0.90509 0.90340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.77 18.54 42.15 0.78 -0.99 16 2 C 0.21 0.04 14.65 -20.76 -0.30 -0.26 16 3 C 0.01 -0.03 2.57 -93.40 -0.24 -0.27 16 4 H 0.12 -0.68 8.14 -51.93 -0.42 -1.11 16 5 C -0.11 0.52 5.16 -26.73 -0.14 0.38 16 6 C -0.12 0.71 5.39 -26.73 -0.14 0.57 16 7 C 0.14 -0.54 2.45 -67.93 -0.17 -0.71 16 8 H 0.09 -0.16 7.58 -51.93 -0.39 -0.56 16 9 N -0.73 3.04 5.08 -53.81 -0.27 2.77 16 10 C 0.52 -0.83 7.79 -10.98 -0.09 -0.92 16 11 O -0.54 -1.30 15.65 5.56 0.09 -1.21 16 12 C -0.14 0.46 6.07 -27.88 -0.17 0.29 16 13 C 0.07 -0.06 4.03 37.16 0.15 0.09 16 14 O -0.32 -0.25 10.14 -19.41 -0.20 -0.44 16 15 C 0.14 0.18 6.69 -39.22 -0.26 -0.08 16 16 C -0.15 -0.14 9.99 -39.44 -0.39 -0.53 16 17 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 18 C -0.16 -0.08 5.39 -104.60 -0.56 -0.64 16 19 C -0.07 0.00 2.82 36.01 0.10 0.10 16 20 O -0.53 -0.78 12.77 -35.23 -0.45 -1.23 16 21 Si 0.68 -0.36 29.79 -169.99 -5.06 -5.43 16 22 C -0.08 -0.02 8.66 -39.60 -0.34 -0.36 16 23 C -0.20 -0.14 9.04 -39.43 -0.36 -0.50 16 24 C -0.13 0.49 5.49 -26.73 -0.15 0.34 16 25 C -0.11 0.40 5.16 -26.73 -0.14 0.27 16 26 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 27 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 28 H 0.08 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.08 -0.53 8.14 -51.93 -0.42 -0.95 16 30 H 0.40 -2.76 8.60 -40.82 -0.35 -3.11 16 31 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 32 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 33 H 0.07 -0.03 7.62 -51.93 -0.40 -0.43 16 34 H 0.07 -0.04 7.62 -51.93 -0.40 -0.44 16 35 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 36 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 37 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 38 H 0.38 -0.46 8.70 45.56 0.40 -0.07 16 39 H -0.26 -0.39 7.10 56.52 0.40 0.01 16 40 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 41 H 0.13 -0.18 4.87 -52.49 -0.26 -0.44 16 42 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 43 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 46 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 LS Contribution 382.04 15.07 5.76 5.76 Total: 0.00 -9.76 382.04 -9.77 -19.53 By element: Atomic # 1 Polarization: -9.27 SS G_CDS: -6.83 Total: -16.11 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -3.58 Total: -2.66 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: 0.51 Total: 1.78 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.56 Total: -2.88 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.06 Total: -5.43 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -9.76 -9.77 -19.53 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.768 kcal (2) G-P(sol) polarization free energy of solvation -9.762 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds