Wall clock time and date at job start Sun Mar 7 2021 06:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 H 1.09003 * 109.46611 * 206.61961 * 3 2 1 5 5 C 1.52998 * 109.47280 * 326.62135 * 3 2 1 6 6 C 1.53003 * 109.46942 * 179.97438 * 5 3 2 7 7 C 1.52996 * 109.47234 * 300.00567 * 6 5 3 8 8 H 1.09003 * 109.46883 * 299.99300 * 7 6 5 9 9 N 1.46499 * 109.47005 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99970 * 154.99482 * 9 7 6 11 11 O 1.21282 * 120.00088 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00151 * 179.97438 * 10 9 7 13 13 C 1.52998 * 109.47216 * 180.02562 * 12 10 9 14 14 O 1.42904 * 109.47021 * 180.02562 * 13 12 10 15 15 C 1.35895 * 116.99884 * 180.02562 * 14 13 12 16 16 C 1.38736 * 120.05789 * 180.02562 * 15 14 13 17 17 C 1.38134 * 119.94971 * 180.02562 * 16 15 14 18 18 C 1.38267 * 120.05527 * 359.97264 * 17 16 15 19 19 C 1.50702 * 119.94890 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47007 * 300.00359 * 19 18 17 21 21 Si 1.86300 * 109.47301 * 179.97438 * 19 18 17 22 22 C 1.38273 * 120.10994 * 0.29777 * 18 17 16 23 23 C 1.38148 * 120.05257 * 359.44983 * 22 18 17 24 24 C 1.52998 * 109.47619 * 59.99848 * 7 6 5 25 25 C 1.53003 * 109.46986 * 299.99772 * 24 7 6 26 26 H 1.09005 * 109.46710 * 60.00381 * 5 3 2 27 27 H 1.08993 * 109.47318 * 300.00186 * 5 3 2 28 28 H 1.08995 * 109.47001 * 179.97438 * 6 5 3 29 29 H 1.09003 * 109.46614 * 60.00031 * 6 5 3 30 30 H 0.97003 * 119.99998 * 334.99892 * 9 7 6 31 31 H 1.09002 * 109.46787 * 60.00462 * 12 10 9 32 32 H 1.09003 * 109.47247 * 300.00517 * 12 10 9 33 33 H 1.09002 * 109.47082 * 60.00377 * 13 12 10 34 34 H 1.08997 * 109.47064 * 299.99840 * 13 12 10 35 35 H 1.08005 * 120.02336 * 359.97438 * 16 15 14 36 36 H 1.07997 * 119.97664 * 179.97438 * 17 16 15 37 37 H 1.09004 * 109.46923 * 59.99928 * 19 18 17 38 38 H 0.96700 * 113.99509 * 299.99566 * 20 19 18 39 39 H 1.48498 * 109.99634 * 58.68378 * 21 19 18 40 40 H 1.48502 * 109.99691 * 180.02562 * 21 19 18 41 41 H 1.07998 * 119.96907 * 179.70795 * 22 18 17 42 42 H 1.07995 * 120.02276 * 180.24633 * 23 22 18 43 43 H 1.08997 * 109.47019 * 59.99652 * 24 7 6 44 44 H 1.08997 * 109.47405 * 180.02562 * 24 7 6 45 45 H 1.09000 * 109.47511 * 300.00475 * 25 24 7 46 46 H 1.08997 * 109.47418 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9709 0.9196 0.4605 5 6 3.1186 -1.2036 0.7936 6 6 4.6487 -1.2032 0.7930 7 6 5.1581 -1.2882 -0.6471 8 1 4.7950 -2.2071 -1.1074 9 7 6.6231 -1.2872 -0.6477 10 6 7.2970 -1.8418 -1.6747 11 8 6.6906 -2.3413 -2.5987 12 6 8.8040 -1.8403 -1.6756 13 6 9.3140 -2.5254 -2.9449 14 8 10.7431 -2.5245 -2.9454 15 6 11.3600 -3.0990 -4.0113 16 6 12.7454 -3.1337 -4.0767 17 6 13.3701 -3.7178 -5.1614 18 6 12.6160 -4.2682 -6.1813 19 6 13.3001 -4.9053 -7.3633 20 8 14.1162 -3.9344 -8.0216 21 14 12.0170 -5.5476 -8.5515 22 6 11.2351 -4.2299 -6.1212 23 6 10.6056 -3.6515 -5.0360 24 6 4.6476 -0.0839 -1.4407 25 6 3.1175 -0.0844 -1.4403 26 1 2.7557 -2.1225 0.3330 27 1 2.7553 -1.1433 1.8194 28 1 5.0124 -2.0609 1.3587 29 1 5.0118 -0.2843 1.2533 30 1 7.1081 -0.8874 0.0912 31 1 9.1684 -2.3783 -0.8004 32 1 9.1664 -0.8126 -1.6471 33 1 8.9497 -1.9870 -3.8199 34 1 8.9517 -3.5530 -2.9737 35 1 13.3349 -2.7036 -3.2805 36 1 14.4485 -3.7447 -5.2129 37 1 13.9232 -5.7314 -7.0206 38 1 13.6268 -3.1693 -8.3535 39 1 11.1405 -4.4366 -9.0017 40 1 12.6790 -6.1789 -9.7214 41 1 10.6483 -4.6563 -6.9214 42 1 9.5270 -3.6255 -4.9878 43 1 5.0108 0.8350 -0.9804 44 1 5.0102 -0.1447 -2.4668 45 1 2.7543 -1.0033 -1.9004 46 1 2.7537 0.7738 -2.0052 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:01:03 Heat of formation + Delta-G solvation = -64.989209 kcal Electronic energy + Delta-G solvation = -26748.047747 eV Core-core repulsion = 22796.939169 eV Total energy + Delta-G solvation = -3951.108577 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.41678 -41.00291 -39.65130 -39.11100 -37.39220 -37.24977 -35.15523 -33.39252 -32.07102 -31.79974 -31.54360 -30.56722 -26.65947 -25.72085 -24.25279 -23.75415 -23.23974 -22.17389 -21.39839 -20.94937 -19.47985 -18.72582 -18.42329 -17.68950 -17.44628 -17.40798 -16.92375 -16.34728 -16.21480 -16.07021 -15.73578 -15.52658 -15.33210 -14.81449 -14.78338 -14.70633 -14.55633 -14.43047 -14.28477 -14.01072 -13.82251 -13.66901 -13.47301 -13.23991 -13.05057 -12.81330 -12.78584 -12.29895 -12.26773 -12.14136 -12.07371 -12.04522 -11.74869 -11.59783 -11.42895 -11.24780 -10.91624 -10.60038 -10.02693 -10.00896 -9.20091 -4.93008 0.29385 0.32138 1.32199 1.58904 1.61982 1.73551 1.75719 1.78373 1.94376 2.53782 2.66685 2.95189 3.43732 3.61471 3.69219 3.74345 3.75052 3.84549 3.91870 3.95657 4.04202 4.06319 4.23388 4.25297 4.28409 4.37194 4.41271 4.43973 4.49248 4.53777 4.58309 4.68770 4.73994 4.75071 4.83607 4.88054 4.99127 5.07007 5.13648 5.19538 5.19771 5.21126 5.30290 5.35817 5.40692 5.50431 5.59491 5.73734 6.34678 6.49477 6.56738 6.58191 7.27581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.504 5.504 2 C 0.236 3.764 3 C 0.013 3.987 4 H 0.149 0.851 5 C -0.107 4.107 6 C -0.114 4.114 7 C 0.139 3.861 8 H 0.066 0.934 9 N -0.710 5.710 10 C 0.519 3.481 11 O -0.584 6.584 12 C -0.133 4.133 13 C 0.071 3.929 14 O -0.321 6.321 15 C 0.124 3.876 16 C -0.158 4.158 17 C -0.059 4.059 18 C -0.160 4.160 19 C -0.074 4.074 20 O -0.549 6.549 21 Si 0.758 3.242 22 C -0.080 4.080 23 C -0.210 4.210 24 C -0.121 4.121 25 C -0.107 4.107 26 H 0.064 0.936 27 H 0.090 0.910 28 H 0.084 0.916 29 H 0.102 0.898 30 H 0.420 0.580 31 H 0.127 0.873 32 H 0.126 0.874 33 H 0.063 0.937 34 H 0.066 0.934 35 H 0.142 0.858 36 H 0.140 0.860 37 H 0.126 0.874 38 H 0.385 0.615 39 H -0.287 1.287 40 H -0.302 1.302 41 H 0.143 0.857 42 H 0.140 0.860 43 H 0.093 0.907 44 H 0.053 0.947 45 H 0.061 0.939 46 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.717 1.623 6.402 7.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.181 5.181 2 C -0.081 4.081 3 C -0.008 4.008 4 H 0.167 0.833 5 C -0.147 4.147 6 C -0.151 4.151 7 C 0.034 3.966 8 H 0.085 0.915 9 N -0.362 5.362 10 C 0.306 3.694 11 O -0.464 6.464 12 C -0.173 4.173 13 C -0.004 4.004 14 O -0.235 6.235 15 C 0.079 3.921 16 C -0.177 4.177 17 C -0.077 4.077 18 C -0.160 4.160 19 C -0.183 4.183 20 O -0.357 6.357 21 Si 0.664 3.336 22 C -0.098 4.098 23 C -0.228 4.228 24 C -0.159 4.159 25 C -0.147 4.147 26 H 0.083 0.917 27 H 0.109 0.891 28 H 0.103 0.897 29 H 0.120 0.880 30 H 0.258 0.742 31 H 0.145 0.855 32 H 0.144 0.856 33 H 0.082 0.918 34 H 0.084 0.916 35 H 0.160 0.840 36 H 0.158 0.842 37 H 0.144 0.856 38 H 0.234 0.766 39 H -0.213 1.213 40 H -0.231 1.231 41 H 0.160 0.840 42 H 0.158 0.842 43 H 0.112 0.888 44 H 0.071 0.929 45 H 0.080 0.920 46 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.769 0.991 5.305 5.680 hybrid contribution 0.471 1.135 -0.423 1.300 sum 2.240 2.126 4.882 5.777 Atomic orbital electron populations 1.81310 1.15366 1.10880 1.10522 1.29922 0.95717 0.91193 0.91295 1.19274 0.78566 1.03956 0.99040 0.83323 1.21520 0.95822 0.96243 1.01090 1.21733 0.94102 1.05258 0.94055 1.21074 0.79137 0.98812 0.97528 0.91550 1.45895 1.07208 1.59494 1.23599 1.20593 0.90060 0.76848 0.81853 1.90748 1.71364 1.47318 1.36955 1.21449 0.90805 1.05613 0.99428 1.22480 0.77139 1.01616 0.99167 1.85959 1.21914 1.74687 1.40904 1.19178 0.92592 0.93422 0.86933 1.20673 0.91391 1.04704 1.00929 1.20970 1.00640 0.94587 0.91529 1.20252 0.93711 1.03830 0.98223 1.25090 1.02459 0.94319 0.96447 1.86561 1.37780 1.34993 1.76325 0.94160 0.77559 0.83686 0.78177 1.20993 0.93845 0.97204 0.97724 1.21410 1.00965 1.04734 0.95720 1.21839 0.94084 0.99353 1.00650 1.21488 0.95805 1.03347 0.94013 0.91688 0.89144 0.89723 0.87954 0.74212 0.85516 0.85577 0.91839 0.91576 0.83986 0.84234 0.85614 0.76566 1.21330 1.23080 0.84014 0.84247 0.88798 0.92856 0.92039 0.90324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -4.84 18.54 20.01 0.37 -4.47 16 2 C 0.24 0.17 14.65 89.44 1.31 1.48 16 3 C 0.01 -0.12 2.57 -12.60 -0.03 -0.15 16 4 H 0.15 -2.21 8.14 -2.39 -0.02 -2.23 16 5 C -0.11 1.15 5.16 30.59 0.16 1.31 16 6 C -0.11 1.53 5.39 30.59 0.16 1.70 16 7 C 0.14 -1.15 2.45 44.99 0.11 -1.04 16 8 H 0.07 -0.15 7.58 -2.39 -0.02 -0.17 16 9 N -0.71 6.78 5.08 -442.54 -2.25 4.53 16 10 C 0.52 -1.70 7.79 87.66 0.68 -1.01 16 11 O -0.58 -3.65 15.65 -3.04 -0.05 -3.70 16 12 C -0.13 0.98 6.07 29.85 0.18 1.16 16 13 C 0.07 -0.09 4.03 71.98 0.29 0.20 16 14 O -0.32 -0.53 10.14 -92.37 -0.94 -1.47 16 15 C 0.12 0.38 6.69 22.51 0.15 0.53 16 16 C -0.16 -0.32 9.99 22.36 0.22 -0.09 16 17 C -0.06 -0.09 9.60 22.25 0.21 0.13 16 18 C -0.16 -0.16 5.39 -19.85 -0.11 -0.27 16 19 C -0.07 0.00 2.82 71.24 0.20 0.20 16 20 O -0.55 -1.65 12.77 -148.98 -1.90 -3.55 16 21 Si 0.76 -0.59 29.79 68.60 2.04 1.46 16 22 C -0.08 -0.05 8.66 22.26 0.19 0.14 16 23 C -0.21 -0.41 9.04 22.37 0.20 -0.21 16 24 C -0.12 0.98 5.49 30.59 0.17 1.15 16 25 C -0.11 0.79 5.16 30.60 0.16 0.94 16 26 H 0.06 -0.51 8.14 -2.38 -0.02 -0.52 16 27 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 28 H 0.08 -1.14 8.14 -2.39 -0.02 -1.16 16 29 H 0.10 -1.82 8.14 -2.39 -0.02 -1.84 16 30 H 0.42 -6.79 8.60 -92.71 -0.80 -7.59 16 31 H 0.13 -1.39 8.14 -2.39 -0.02 -1.41 16 32 H 0.13 -1.38 8.14 -2.39 -0.02 -1.40 16 33 H 0.06 0.02 7.62 -2.39 -0.02 0.00 16 34 H 0.07 0.00 7.62 -2.39 -0.02 -0.02 16 35 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 36 H 0.14 -0.06 8.06 -2.91 -0.02 -0.08 16 37 H 0.13 -0.23 7.96 -2.38 -0.02 -0.25 16 38 H 0.39 -0.86 8.70 -74.06 -0.64 -1.50 16 39 H -0.29 -0.98 7.10 99.48 0.71 -0.27 16 40 H -0.30 -2.07 7.11 99.48 0.71 -1.36 16 41 H 0.14 -0.41 4.87 -2.91 -0.01 -0.42 16 42 H 0.14 0.03 6.30 -2.91 -0.02 0.01 16 43 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 44 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 45 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 46 H 0.08 -0.56 8.14 -2.39 -0.02 -0.57 16 Total: 0.00 -25.76 382.04 1.15 -24.61 By element: Atomic # 1 Polarization: -23.17 SS G_CDS: -0.39 Total: -23.57 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: 4.27 Total: 6.15 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -1.88 Total: 0.06 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -2.89 Total: -8.71 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: 2.04 Total: 1.46 kcal Total: -25.76 1.15 -24.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.384 kcal (2) G-P(sol) polarization free energy of solvation -25.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.606 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds