Wall clock time and date at job start Sun Mar 7 2021 06:01:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 H 1.08994 * 109.47864 * 19.58092 * 3 2 1 5 5 C 1.53006 * 109.46757 * 139.57911 * 3 2 1 6 6 C 1.52998 * 109.47365 * 179.97438 * 5 3 2 7 7 C 1.52998 * 109.46843 * 300.00131 * 6 5 3 8 8 H 1.08995 * 109.47301 * 299.99547 * 7 6 5 9 9 N 1.46505 * 109.47116 * 179.97438 * 7 6 5 10 10 C 1.34778 * 120.00022 * 84.99686 * 9 7 6 11 11 O 1.21276 * 119.99703 * 0.02562 * 10 9 7 12 12 C 1.50698 * 120.00027 * 180.02562 * 10 9 7 13 13 C 1.52997 * 109.47463 * 180.02562 * 12 10 9 14 14 O 1.42892 * 109.47378 * 180.02562 * 13 12 10 15 15 C 1.35908 * 116.99907 * 180.02562 * 14 13 12 16 16 C 1.38706 * 120.05344 * 179.97438 * 15 14 13 17 17 C 1.38166 * 119.94172 * 180.02562 * 16 15 14 18 18 C 1.50701 * 119.97212 * 179.97438 * 17 16 15 19 19 O 1.42902 * 109.46980 * 299.99951 * 18 17 16 20 20 Si 1.86295 * 109.47294 * 180.02562 * 18 17 16 21 21 C 1.38243 * 120.05887 * 359.74301 * 17 16 15 22 22 C 1.38288 * 120.10724 * 0.51419 * 21 17 16 23 23 C 1.38126 * 120.05386 * 359.48327 * 22 21 17 24 24 C 1.52998 * 109.47436 * 59.99972 * 7 6 5 25 25 C 1.52998 * 109.47010 * 259.57148 * 3 2 1 26 26 H 1.09002 * 109.47252 * 299.99822 * 5 3 2 27 27 H 1.09003 * 109.47323 * 59.99624 * 5 3 2 28 28 H 1.09001 * 109.47385 * 179.97438 * 6 5 3 29 29 H 1.09003 * 109.46943 * 59.99714 * 6 5 3 30 30 H 0.96999 * 119.99993 * 264.99685 * 9 7 6 31 31 H 1.09006 * 109.47126 * 60.00032 * 12 10 9 32 32 H 1.09000 * 109.47079 * 300.00284 * 12 10 9 33 33 H 1.08998 * 109.47238 * 59.99524 * 13 12 10 34 34 H 1.09009 * 109.46444 * 300.00134 * 13 12 10 35 35 H 1.08006 * 120.02974 * 359.97438 * 16 15 14 36 36 H 1.08997 * 109.47272 * 59.99834 * 18 17 16 37 37 H 0.96705 * 114.00195 * 299.99788 * 19 18 17 38 38 H 1.48497 * 110.00541 * 58.67787 * 20 18 17 39 39 H 1.48503 * 110.00248 * 180.02562 * 20 18 17 40 40 H 1.07993 * 119.94940 * 180.25047 * 21 17 16 41 41 H 1.08002 * 119.97454 * 179.76977 * 22 21 17 42 42 H 1.07999 * 120.02656 * 180.27809 * 23 22 21 43 43 H 1.09003 * 109.47372 * 59.99791 * 24 7 6 44 44 H 1.09000 * 109.47183 * 180.02562 * 24 7 6 45 45 H 1.09001 * 109.46860 * 60.00651 * 25 3 2 46 46 H 1.08995 * 109.47683 * 300.00578 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -0.9673 -0.3444 5 6 3.1174 1.0991 -0.9354 6 6 4.6474 1.1004 -0.9350 7 6 5.1567 1.3619 0.4838 8 1 4.7926 2.3298 0.8279 9 7 6.6218 1.3624 0.4844 10 6 7.2953 2.4878 0.1739 11 8 6.6886 3.5000 -0.1055 12 6 8.8023 2.4882 0.1739 13 6 9.3120 3.8790 -0.2092 14 8 10.7409 3.8793 -0.2098 15 6 11.3576 5.0470 -0.5309 16 6 12.7427 5.1187 -0.5505 17 6 13.3672 6.3072 -0.8768 18 6 14.8720 6.3859 -0.8978 19 8 15.3835 6.0714 0.3989 20 14 15.3971 8.1097 -1.3704 21 6 12.6129 7.4229 -1.1888 22 6 11.2318 7.3554 -1.1648 23 6 10.6027 6.1696 -0.8392 24 6 4.6474 0.2634 1.4192 25 6 3.1178 0.2620 1.4187 26 1 2.7541 0.9131 -1.9461 27 1 2.7536 2.0672 -0.5910 28 1 5.0103 1.8826 -1.6017 29 1 5.0116 0.1323 -1.2791 30 1 7.1070 0.5529 0.7082 31 1 9.1659 1.7562 -0.5474 32 1 9.1657 2.2297 1.1685 33 1 8.9484 4.6107 0.5123 34 1 8.9485 4.1379 -1.2038 35 1 13.3325 4.2464 -0.3102 36 1 15.2630 5.6744 -1.6250 37 1 15.0764 6.6652 1.0976 38 1 14.8439 9.0922 -0.4041 39 1 16.8792 8.2003 -1.3953 40 1 13.1028 8.3498 -1.4475 41 1 10.6446 8.2294 -1.4052 42 1 9.5241 6.1162 -0.8250 43 1 5.0116 -0.7046 1.0751 44 1 5.0099 0.4500 2.4300 45 1 2.7549 -0.5205 2.0850 46 1 2.7540 1.2300 1.7630 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:01:08 Heat of formation + Delta-G solvation = -65.130761 kcal Electronic energy + Delta-G solvation = -26767.401281 eV Core-core repulsion = 22816.286566 eV Total energy + Delta-G solvation = -3951.114715 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.49962 -41.10297 -39.80411 -39.07674 -37.38306 -37.25982 -35.29120 -33.45316 -32.44550 -32.13186 -31.28385 -30.47444 -27.04879 -25.81335 -24.12754 -24.04055 -23.63679 -22.03431 -21.61868 -21.17348 -19.35717 -18.87462 -18.23801 -17.75338 -17.55261 -17.50724 -17.09562 -16.77188 -16.35495 -16.14530 -15.81344 -15.58596 -15.49820 -14.96203 -14.95472 -14.79711 -14.65983 -14.42475 -14.07209 -14.04013 -13.88940 -13.75413 -13.54091 -13.21882 -13.17021 -12.94023 -12.85632 -12.50624 -12.41596 -12.39153 -12.36867 -11.93071 -11.82848 -11.73898 -11.54885 -11.51548 -11.01557 -10.64476 -10.23317 -9.89331 -9.22107 -4.93947 0.24067 0.43789 1.27938 1.46711 1.61867 1.63709 1.75179 1.78720 1.97359 2.39454 2.70133 2.82414 3.36320 3.37923 3.43876 3.48171 3.63924 3.74966 3.78513 3.79769 3.87942 3.91818 3.96073 4.07251 4.09136 4.13935 4.19266 4.23065 4.27312 4.34196 4.42089 4.53148 4.54553 4.55672 4.59934 4.71357 4.75511 4.78112 4.84794 4.90056 5.00250 5.02933 5.10376 5.29302 5.31562 5.40716 5.47001 5.70849 6.27614 6.39195 6.40739 6.56493 7.03630 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.430 5.430 2 C 0.206 3.794 3 C 0.007 3.993 4 H 0.117 0.883 5 C -0.110 4.110 6 C -0.128 4.128 7 C 0.140 3.860 8 H 0.093 0.907 9 N -0.726 5.726 10 C 0.522 3.478 11 O -0.536 6.536 12 C -0.142 4.142 13 C 0.074 3.926 14 O -0.316 6.316 15 C 0.132 3.868 16 C -0.126 4.126 17 C -0.081 4.081 18 C -0.076 4.076 19 O -0.529 6.529 20 Si 0.688 3.312 21 C -0.154 4.154 22 C -0.073 4.073 23 C -0.202 4.202 24 C -0.125 4.125 25 C -0.109 4.109 26 H 0.078 0.922 27 H 0.076 0.924 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.403 0.597 31 H 0.108 0.892 32 H 0.107 0.893 33 H 0.072 0.928 34 H 0.073 0.927 35 H 0.134 0.866 36 H 0.120 0.880 37 H 0.376 0.624 38 H -0.260 1.260 39 H -0.257 1.257 40 H 0.129 0.871 41 H 0.131 0.869 42 H 0.132 0.868 43 H 0.076 0.924 44 H 0.079 0.921 45 H 0.081 0.919 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.665 -2.267 -0.634 3.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.105 5.105 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.134 0.866 5 C -0.149 4.149 6 C -0.167 4.167 7 C 0.036 3.964 8 H 0.111 0.889 9 N -0.377 5.377 10 C 0.308 3.692 11 O -0.413 6.413 12 C -0.182 4.182 13 C -0.001 4.001 14 O -0.230 6.230 15 C 0.087 3.913 16 C -0.144 4.144 17 C -0.081 4.081 18 C -0.185 4.185 19 O -0.335 6.335 20 Si 0.589 3.411 21 C -0.172 4.172 22 C -0.091 4.091 23 C -0.221 4.221 24 C -0.163 4.163 25 C -0.148 4.148 26 H 0.097 0.903 27 H 0.095 0.905 28 H 0.095 0.905 29 H 0.090 0.910 30 H 0.238 0.762 31 H 0.126 0.874 32 H 0.125 0.875 33 H 0.090 0.910 34 H 0.091 0.909 35 H 0.152 0.848 36 H 0.138 0.862 37 H 0.224 0.776 38 H -0.185 1.185 39 H -0.182 1.182 40 H 0.146 0.854 41 H 0.148 0.852 42 H 0.150 0.850 43 H 0.095 0.905 44 H 0.098 0.902 45 H 0.099 0.901 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.303 -1.480 -0.869 2.155 hybrid contribution 0.205 -0.580 1.244 1.388 sum 1.508 -2.060 0.375 2.580 Atomic orbital electron populations 1.81290 1.12975 1.08280 1.07945 1.29152 0.95057 0.93481 0.93585 1.18982 0.81411 1.02637 0.98408 0.86566 1.21536 0.95555 0.98233 0.99585 1.21921 0.94545 1.03172 0.97044 1.21089 0.79018 1.00711 0.95556 0.88882 1.46015 1.07263 1.13398 1.71047 1.20290 0.89410 0.83258 0.76248 1.90757 1.70384 1.32506 1.47635 1.21478 0.92163 0.98777 1.05808 1.22414 0.77929 0.97047 1.02740 1.85976 1.21167 1.31516 1.84366 1.18951 0.92105 0.84856 0.95394 1.20237 0.91019 0.98809 1.04363 1.20073 0.95874 0.93171 0.99025 1.25074 0.91181 1.13806 0.88476 1.86604 1.72697 1.57425 1.16771 0.94885 0.80883 0.74336 0.90966 1.20924 0.94236 0.97987 1.04062 1.20932 0.94184 0.97286 0.96731 1.21395 1.00543 0.93411 1.06707 1.21792 0.95216 0.98977 1.00319 1.21505 0.95046 1.03908 0.94346 0.90317 0.90528 0.90470 0.90952 0.76194 0.87406 0.87469 0.90972 0.90893 0.84824 0.86196 0.77595 1.18493 1.18220 0.85403 0.85155 0.84970 0.90492 0.90238 0.90066 0.90446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.80 18.54 42.15 0.78 -1.02 16 2 C 0.21 0.06 14.65 -20.76 -0.30 -0.24 16 3 C 0.01 -0.03 2.57 -93.41 -0.24 -0.27 16 4 H 0.12 -0.67 8.14 -51.93 -0.42 -1.10 16 5 C -0.11 0.39 5.16 -26.73 -0.14 0.26 16 6 C -0.13 0.47 5.49 -26.73 -0.15 0.32 16 7 C 0.14 -0.52 2.45 -67.93 -0.17 -0.68 16 8 H 0.09 -0.14 7.58 -51.93 -0.39 -0.54 16 9 N -0.73 2.87 5.08 -53.81 -0.27 2.60 16 10 C 0.52 -0.69 7.79 -10.99 -0.09 -0.77 16 11 O -0.54 -1.45 15.65 5.56 0.09 -1.36 16 12 C -0.14 0.41 6.07 -27.89 -0.17 0.24 16 13 C 0.07 -0.04 4.03 37.16 0.15 0.11 16 14 O -0.32 -0.42 10.14 -19.45 -0.20 -0.61 16 15 C 0.13 0.24 6.69 -39.22 -0.26 -0.03 16 16 C -0.13 -0.21 9.55 -39.43 -0.38 -0.59 16 17 C -0.08 -0.05 5.39 -104.65 -0.56 -0.62 16 18 C -0.08 0.00 2.82 36.01 0.10 0.10 16 19 O -0.53 -0.76 12.77 -35.23 -0.45 -1.21 16 20 Si 0.69 -0.60 29.78 -169.99 -5.06 -5.67 16 21 C -0.15 0.01 8.67 -39.56 -0.34 -0.34 16 22 C -0.07 0.00 10.04 -39.60 -0.40 -0.40 16 23 C -0.20 -0.18 9.04 -39.43 -0.36 -0.53 16 24 C -0.12 0.69 5.39 -26.75 -0.14 0.55 16 25 C -0.11 0.50 5.16 -26.75 -0.14 0.37 16 26 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.34 8.14 -51.93 -0.42 -0.77 16 30 H 0.40 -2.66 8.60 -40.82 -0.35 -3.01 16 31 H 0.11 -0.46 8.14 -51.93 -0.42 -0.88 16 32 H 0.11 -0.44 8.14 -51.93 -0.42 -0.87 16 33 H 0.07 0.00 7.62 -51.93 -0.40 -0.40 16 34 H 0.07 -0.01 7.62 -51.92 -0.40 -0.41 16 35 H 0.13 0.21 8.06 -52.48 -0.42 -0.21 16 36 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 37 H 0.38 -0.50 8.70 45.56 0.40 -0.11 16 38 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 39 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 40 H 0.13 -0.24 4.87 -52.49 -0.26 -0.49 16 41 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 42 H 0.13 -0.02 6.30 -52.49 -0.33 -0.35 16 43 H 0.08 -0.52 8.14 -51.93 -0.42 -0.94 16 44 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 45 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 46 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 LS Contribution 382.04 15.07 5.76 5.76 Total: 0.00 -9.87 382.04 -9.77 -19.64 By element: Atomic # 1 Polarization: -8.78 SS G_CDS: -6.83 Total: -15.62 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -3.58 Total: -2.52 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: 0.51 Total: 1.58 kcal Atomic # 8 Polarization: -2.62 SS G_CDS: -0.56 Total: -3.18 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.06 Total: -5.67 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -9.87 -9.77 -19.64 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.488 kcal (2) G-P(sol) polarization free energy of solvation -9.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.643 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.131 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds