Wall clock time and date at job start Sun Mar 7 2021 06:01:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35991 * 116.99994 * 2 1 4 4 C 1.39153 * 120.07654 * 180.02562 * 3 2 1 5 5 O 1.36002 * 120.06652 * 359.97438 * 4 3 2 6 6 C 1.42898 * 116.99407 * 179.73054 * 5 4 3 7 7 C 1.50706 * 109.46863 * 180.02562 * 6 5 4 8 8 O 1.21281 * 119.99941 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99650 * 179.97438 * 7 6 5 10 10 C 1.46506 * 119.99403 * 179.97438 * 9 7 6 11 11 H 1.08996 * 109.47564 * 325.00095 * 10 9 7 12 12 C 1.53002 * 109.47042 * 85.00666 * 10 9 7 13 13 C 1.52996 * 109.46972 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47131 * 299.99541 * 13 12 10 15 15 H 1.08996 * 109.46952 * 300.00306 * 14 13 12 16 16 C 1.47206 * 109.47168 * 180.02562 * 14 13 12 17 17 N 9.14929 * 127.28253 * 7.65834 * 6 1 2 18 18 C 1.53002 * 109.46817 * 60.00365 * 14 13 12 19 19 C 1.52996 * 109.46972 * 299.99733 * 18 14 13 20 20 C 1.38559 * 119.85835 * 179.71954 * 4 3 2 21 21 C 1.38250 * 119.99744 * 0.27786 * 20 4 3 22 22 N 1.47999 * 119.92453 * 179.97438 * 21 20 4 23 23 O 1.21802 * 120.00368 * 359.97438 * 22 21 20 24 24 O 1.21806 * 120.00135 * 179.97438 * 22 21 20 25 25 C 1.38243 * 120.14659 * 359.97435 * 21 20 4 26 26 C 1.50703 * 119.92637 * 180.02562 * 25 21 20 27 27 O 1.42895 * 109.47241 * 74.99899 * 26 25 21 28 28 Si 1.86301 * 109.46998 * 195.00127 * 26 25 21 29 29 C 1.38250 * 120.14993 * 0.02562 * 25 21 20 30 30 H 1.09001 * 109.47065 * 300.00302 * 1 2 3 31 31 H 1.09001 * 109.47191 * 60.00466 * 1 2 3 32 32 H 1.09000 * 109.46905 * 180.02562 * 1 2 3 33 33 H 1.08993 * 109.47502 * 59.99727 * 6 5 4 34 34 H 1.09007 * 109.47288 * 299.99662 * 6 5 4 35 35 H 0.96996 * 120.00529 * 0.02562 * 9 7 6 36 36 H 1.09000 * 109.46986 * 299.99561 * 12 10 9 37 37 H 1.08996 * 109.47407 * 59.99333 * 12 10 9 38 38 H 1.09001 * 109.46993 * 179.97438 * 13 12 10 39 39 H 1.09004 * 109.47298 * 59.99824 * 13 12 10 40 40 H 1.08996 * 109.47407 * 60.00219 * 18 14 13 41 41 H 1.09004 * 109.46733 * 179.97438 * 18 14 13 42 42 H 1.09001 * 109.46993 * 180.02562 * 19 18 14 43 43 H 1.09000 * 109.47380 * 299.99696 * 19 18 14 44 44 H 1.07996 * 120.00346 * 180.24625 * 20 4 3 45 45 H 1.09004 * 109.46807 * 314.99404 * 26 25 21 46 46 H 0.96701 * 114.00354 * 60.00013 * 27 26 25 47 47 H 1.48503 * 109.99862 * 179.97438 * 28 26 25 48 48 H 1.48501 * 109.99805 * 301.31298 * 28 26 25 49 49 H 1.07994 * 120.00476 * 180.02562 * 29 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2864 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3007 -0.0071 7 6 6.2519 -1.0582 -0.0067 8 8 5.5670 -2.0591 -0.0009 9 7 7.5957 -1.1612 -0.0129 10 6 8.2291 -2.4822 -0.0119 11 1 7.6300 -3.1720 0.5824 12 6 8.3294 -3.0007 -1.4479 13 6 8.9915 -4.3800 -1.4470 14 6 10.3937 -4.2723 -0.8446 15 1 10.9925 -3.5822 -1.4390 16 6 11.0309 -5.5993 -0.8442 17 7 11.5214 -6.6275 -0.8140 18 6 10.2933 -3.7538 0.5914 19 6 9.6313 -2.3745 0.5905 20 6 4.0603 2.5233 -0.0064 21 6 3.3029 3.6799 -0.0059 22 7 3.9714 5.0002 -0.0116 23 8 5.1876 5.0671 -0.0163 24 8 3.3055 6.0201 -0.0117 25 6 1.9225 3.6058 -0.0001 26 6 1.1017 4.8697 -0.0002 27 8 1.1294 5.4556 -1.3032 28 14 -0.6576 4.4676 0.4627 29 6 1.2932 2.3748 0.0058 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 5.9104 0.8530 0.8799 34 1 5.9027 0.8479 -0.9000 35 1 8.1434 -0.3607 -0.0171 36 1 7.3305 -3.0771 -1.8773 37 1 8.9285 -2.3109 -2.0423 38 1 9.0626 -4.7496 -2.4700 39 1 8.3926 -5.0701 -0.8525 40 1 9.6946 -4.4438 1.1859 41 1 11.2924 -3.6775 1.0208 42 1 9.5602 -2.0049 1.6135 43 1 10.2302 -1.6844 -0.0039 44 1 5.1385 2.5840 -0.0109 45 1 1.5162 5.5720 0.7230 46 1 0.7747 4.8850 -1.9987 47 1 -1.4773 5.7059 0.4668 48 1 -1.2238 3.4864 -0.4974 49 1 0.2147 2.3196 0.0099 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:01:32 Heat of formation + Delta-G solvation = -77.406260 kcal Electronic energy + Delta-G solvation = -36450.686912 eV Core-core repulsion = 31349.341264 eV Total energy + Delta-G solvation = -5101.345649 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -43.35801 -42.08830 -41.20467 -40.03715 -39.34674 -39.12374 -37.70870 -37.30359 -37.17922 -35.21966 -32.68233 -32.58131 -31.80780 -31.42047 -29.34329 -28.68795 -27.89390 -25.84296 -24.55102 -23.76788 -23.68410 -23.14069 -21.59660 -21.16683 -20.74463 -19.81144 -19.51983 -18.76791 -18.69526 -18.62372 -18.42071 -17.70122 -17.61281 -17.46982 -16.97554 -16.84404 -16.45729 -16.19145 -16.06441 -15.66637 -15.39904 -15.30905 -15.05194 -14.81246 -14.77690 -14.51248 -14.45631 -13.95754 -13.83163 -13.75370 -13.68169 -13.43773 -13.24535 -13.04397 -13.02329 -12.68103 -12.46706 -12.45149 -12.34715 -12.30169 -12.21836 -12.14686 -12.10198 -12.07619 -11.68893 -11.43988 -11.26464 -10.95743 -10.63575 -10.46150 -10.09145 -9.46864 -4.99781 -1.32545 -0.41407 0.20115 0.34241 1.14302 1.30656 1.46943 1.47950 1.71530 1.74855 1.89076 1.90317 1.94906 2.39772 2.93530 2.99801 3.19360 3.28671 3.43970 3.50537 3.58157 3.70236 3.73977 3.92840 3.97134 4.00677 4.03841 4.08870 4.11428 4.21396 4.24047 4.26858 4.32640 4.39255 4.39979 4.43296 4.53201 4.61317 4.70310 4.73357 4.78340 4.87364 5.04981 5.13471 5.19011 5.20652 5.30140 5.34677 5.35913 5.52040 5.62405 6.06983 6.44005 6.49935 6.51974 6.56943 7.18550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.306 6.306 3 C 0.168 3.832 4 C 0.103 3.897 5 O -0.291 6.291 6 C 0.024 3.976 7 C 0.516 3.484 8 O -0.567 6.567 9 N -0.704 5.704 10 C 0.141 3.859 11 H 0.066 0.934 12 C -0.122 4.122 13 C -0.107 4.107 14 C 0.013 3.987 15 H 0.151 0.849 16 C 0.235 3.765 17 N -0.505 5.505 18 C -0.108 4.108 19 C -0.113 4.113 20 C -0.108 4.108 21 C -0.042 4.042 22 N 0.036 4.964 23 O -0.184 6.184 24 O -0.166 6.166 25 C -0.035 4.035 26 C -0.101 4.101 27 O -0.529 6.529 28 Si 0.773 3.227 29 C -0.173 4.173 30 H 0.088 0.912 31 H 0.074 0.926 32 H 0.122 0.878 33 H 0.129 0.871 34 H 0.128 0.872 35 H 0.423 0.577 36 H 0.051 0.949 37 H 0.097 0.903 38 H 0.079 0.921 39 H 0.060 0.940 40 H 0.064 0.936 41 H 0.091 0.909 42 H 0.086 0.914 43 H 0.105 0.895 44 H 0.186 0.814 45 H 0.129 0.871 46 H 0.383 0.617 47 H -0.295 1.295 48 H -0.250 1.250 49 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.893 2.005 1.751 3.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.218 6.218 3 C 0.119 3.881 4 C 0.056 3.944 5 O -0.204 6.204 6 C -0.053 4.053 7 C 0.302 3.698 8 O -0.445 6.445 9 N -0.358 5.358 10 C 0.037 3.963 11 H 0.084 0.916 12 C -0.160 4.160 13 C -0.147 4.147 14 C -0.008 4.008 15 H 0.168 0.832 16 C -0.082 4.082 17 N -0.182 5.182 18 C -0.147 4.147 19 C -0.151 4.151 20 C -0.128 4.128 21 C -0.127 4.127 22 N 0.549 4.451 23 O -0.395 6.395 24 O -0.380 6.380 25 C -0.037 4.037 26 C -0.208 4.208 27 O -0.336 6.336 28 Si 0.674 3.326 29 C -0.192 4.192 30 H 0.107 0.893 31 H 0.092 0.908 32 H 0.140 0.860 33 H 0.147 0.853 34 H 0.145 0.855 35 H 0.261 0.739 36 H 0.070 0.930 37 H 0.115 0.885 38 H 0.098 0.902 39 H 0.079 0.921 40 H 0.082 0.918 41 H 0.110 0.890 42 H 0.105 0.895 43 H 0.124 0.876 44 H 0.203 0.797 45 H 0.146 0.854 46 H 0.232 0.768 47 H -0.223 1.223 48 H -0.176 1.176 49 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges -2.467 -0.804 1.882 3.205 hybrid contribution 0.502 1.070 -1.287 1.748 sum -1.964 0.266 0.595 2.070 Atomic orbital electron populations 1.23734 0.75039 1.06908 1.03690 1.86325 1.24476 1.24690 1.86317 1.18685 0.89304 0.86223 0.93870 1.17938 0.88661 0.85238 1.02570 1.86309 1.18687 1.26723 1.88652 1.22969 0.78625 0.96444 1.07306 1.20281 0.83343 0.90210 0.76004 1.90791 1.64025 1.39770 1.49875 1.45729 1.04917 1.10621 1.74508 1.21109 0.94636 0.83718 0.96859 0.91557 1.21851 1.01027 0.96405 0.96750 1.21482 0.93181 0.97990 1.02006 1.19274 0.96134 0.84642 1.00722 0.83173 1.30084 0.91908 0.94973 0.91213 1.81464 1.11877 1.14151 1.10670 1.21523 1.02920 0.96988 0.93267 1.21739 0.92993 0.97266 1.03084 1.20916 1.03075 0.88013 1.00748 1.20535 0.92640 0.82016 1.17492 1.43694 1.00817 1.03377 0.97189 1.94501 0.96484 1.94094 1.54443 1.94584 1.64471 1.25366 1.53540 1.20075 0.91072 0.97289 0.95275 1.25755 1.11603 0.93878 0.89589 1.86772 1.85268 1.45061 1.16494 0.94256 0.70306 0.79687 0.88325 1.21208 1.02176 0.88472 1.07305 0.89315 0.90767 0.85986 0.85299 0.85490 0.73892 0.92989 0.88496 0.90214 0.92126 0.91750 0.89050 0.89541 0.87649 0.79689 0.85385 0.76822 1.22259 1.17556 0.79766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 0.12 10.28 -79.58 -0.82 -0.70 16 3 C 0.17 -0.27 6.70 22.57 0.15 -0.11 16 4 C 0.10 -0.09 6.70 22.57 0.15 0.06 16 5 O -0.29 -0.41 9.46 -67.16 -0.64 -1.05 16 6 C 0.02 -0.17 5.22 71.24 0.37 0.20 16 7 C 0.52 -1.05 7.87 87.66 0.69 -0.36 16 8 O -0.57 -5.46 16.16 16.01 0.26 -5.20 16 9 N -0.70 6.92 5.08 -442.52 -2.25 4.67 16 10 C 0.14 -1.17 2.45 44.99 0.11 -1.06 16 11 H 0.07 -0.13 7.58 -2.39 -0.02 -0.15 16 12 C -0.12 0.98 5.49 30.59 0.17 1.15 16 13 C -0.11 0.78 5.16 30.59 0.16 0.94 16 14 C 0.01 -0.12 2.56 -12.60 -0.03 -0.16 16 15 H 0.15 -2.29 8.14 -2.39 -0.02 -2.31 16 16 C 0.23 0.17 14.66 89.40 1.31 1.48 16 17 N -0.51 -4.89 18.56 20.05 0.37 -4.52 16 18 C -0.11 1.17 5.16 30.59 0.16 1.33 16 19 C -0.11 1.57 5.39 30.59 0.16 1.74 16 20 C -0.11 0.26 8.54 22.35 0.19 0.45 16 21 C -0.04 -0.07 6.85 36.38 0.25 0.18 16 22 N 0.04 0.28 4.45 -46.47 -0.21 0.07 16 23 O -0.18 -1.58 18.44 18.88 0.35 -1.24 16 24 O -0.17 -1.84 14.62 25.09 0.37 -1.48 16 25 C -0.03 0.05 5.26 -19.86 -0.10 -0.05 16 26 C -0.10 0.08 1.74 71.24 0.12 0.20 16 27 O -0.53 -1.41 11.80 -129.63 -1.53 -2.94 16 28 Si 0.77 -4.63 30.24 68.60 2.07 -2.56 16 29 C -0.17 0.89 7.65 22.35 0.17 1.06 16 30 H 0.09 -1.19 7.65 -2.39 -0.02 -1.20 16 31 H 0.07 -0.85 7.68 -2.39 -0.02 -0.86 16 32 H 0.12 -1.31 8.14 -2.39 -0.02 -1.33 16 33 H 0.13 -1.69 7.66 -2.39 -0.02 -1.71 16 34 H 0.13 -1.64 7.66 -2.38 -0.02 -1.66 16 35 H 0.42 -7.38 8.60 -92.71 -0.80 -8.18 16 36 H 0.05 -0.11 8.14 -2.39 -0.02 -0.12 16 37 H 0.10 -1.22 8.14 -2.39 -0.02 -1.24 16 38 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 39 H 0.06 -0.23 8.14 -2.38 -0.02 -0.25 16 40 H 0.06 -0.50 8.14 -2.39 -0.02 -0.52 16 41 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 42 H 0.09 -1.21 8.14 -2.39 -0.02 -1.23 16 43 H 0.11 -1.96 8.14 -2.39 -0.02 -1.97 16 44 H 0.19 -1.38 5.85 -2.91 -0.02 -1.40 16 45 H 0.13 0.22 6.07 -2.38 -0.01 0.21 16 46 H 0.38 -1.88 8.70 -74.06 -0.64 -2.52 16 47 H -0.30 -0.76 7.11 99.48 0.71 -0.05 16 48 H -0.25 1.74 6.68 99.48 0.66 2.40 16 49 H 0.19 -1.91 3.09 -2.91 -0.01 -1.92 16 Total: 0.00 -37.21 412.06 2.73 -34.48 By element: Atomic # 1 Polarization: -27.31 SS G_CDS: -0.40 Total: -27.71 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: 5.14 Total: 8.17 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -2.08 Total: 0.22 kcal Atomic # 8 Polarization: -10.59 SS G_CDS: -2.01 Total: -12.60 kcal Atomic # 14 Polarization: -4.63 SS G_CDS: 2.07 Total: -2.56 kcal Total: -37.21 2.73 -34.48 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.929 kcal (2) G-P(sol) polarization free energy of solvation -37.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.477 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds