Wall clock time and date at job start Sun Mar 7 2021 06:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.08996 * 109.47367 * 245.19867 * 3 2 1 5 5 C 1.52997 * 109.47172 * 5.19840 * 3 2 1 6 6 C 1.53006 * 109.47127 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.46626 * 299.99539 * 6 5 3 8 8 H 1.08993 * 109.47839 * 299.99931 * 7 6 5 9 9 N 1.46506 * 109.46691 * 179.97438 * 7 6 5 10 10 C 1.34783 * 119.99811 * 155.00013 * 9 7 6 11 11 O 1.21287 * 119.99943 * 0.02562 * 10 9 7 12 12 C 1.50696 * 120.00006 * 179.97438 * 10 9 7 13 13 O 1.42894 * 109.47002 * 180.02562 * 12 10 9 14 14 C 1.35907 * 116.99966 * 180.02562 * 13 12 10 15 15 C 1.38711 * 120.05328 * 180.02562 * 14 13 12 16 16 C 1.38171 * 119.94019 * 180.02562 * 15 14 13 17 17 C 1.50704 * 119.97092 * 180.02562 * 16 15 14 18 18 O 1.42900 * 109.47102 * 64.99526 * 17 16 15 19 19 Si 1.86300 * 109.46826 * 184.99578 * 17 16 15 20 20 C 1.38245 * 120.05499 * 359.97438 * 16 15 14 21 21 C 1.38281 * 120.11321 * 359.97438 * 20 16 15 22 22 C 1.38123 * 120.05616 * 359.77072 * 21 20 16 23 23 C 1.52997 * 109.46991 * 60.00378 * 7 6 5 24 24 C 1.52996 * 109.47131 * 299.99311 * 23 7 6 25 25 H 1.09001 * 109.47502 * 60.00232 * 5 3 2 26 26 H 1.09001 * 109.47289 * 300.00028 * 5 3 2 27 27 H 1.08993 * 109.46955 * 60.00011 * 6 5 3 28 28 H 1.09000 * 109.47050 * 179.97438 * 6 5 3 29 29 H 0.97000 * 120.00279 * 335.00513 * 9 7 6 30 30 H 1.08997 * 109.47646 * 300.00758 * 12 10 9 31 31 H 1.09002 * 109.46942 * 60.00572 * 12 10 9 32 32 H 1.07996 * 120.03213 * 359.96980 * 15 14 13 33 33 H 1.08993 * 109.46679 * 304.99344 * 17 16 15 34 34 H 0.96706 * 113.99823 * 60.00071 * 18 17 16 35 35 H 1.48502 * 109.99847 * 180.02562 * 19 17 16 36 36 H 1.48498 * 110.00219 * 301.31758 * 19 17 16 37 37 H 1.08000 * 119.94116 * 180.02562 * 20 16 15 38 38 H 1.08000 * 119.97614 * 180.02562 * 21 20 16 39 39 H 1.07996 * 120.03031 * 180.27428 * 22 21 20 40 40 H 1.09001 * 109.47289 * 179.97438 * 23 7 6 41 41 H 1.09000 * 109.47611 * 59.99933 * 23 7 6 42 42 H 1.08996 * 109.47452 * 300.00000 * 24 23 7 43 43 H 1.09000 * 109.47054 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9712 0.4319 0.9328 5 6 3.1186 -1.4356 -0.1307 6 6 4.6487 -1.4350 -0.1301 7 6 5.1587 -0.6032 -1.3086 8 1 4.7960 -1.0343 -2.2416 9 7 6.6238 -0.6021 -1.3076 10 6 7.2982 -0.3950 -2.4560 11 8 6.6923 -0.2091 -3.4901 12 6 8.8052 -0.3933 -2.4550 13 8 9.2821 -0.1540 -3.7806 14 6 10.6296 -0.1214 -3.9550 15 6 11.1615 0.1068 -5.2156 16 6 12.5317 0.1389 -5.3903 17 6 13.1104 0.3873 -6.7595 18 8 12.7672 1.7061 -7.1896 19 14 14.9646 0.2197 -6.6896 20 6 13.3723 -0.0556 -4.3101 21 6 12.8444 -0.2822 -3.0523 22 6 11.4753 -0.3100 -2.8713 23 6 4.6481 0.8331 -1.1779 24 6 3.1181 0.8324 -1.1785 25 1 2.7556 -1.8669 -1.0636 26 1 2.7556 -2.0282 0.7091 27 1 5.0114 -1.0039 0.8030 28 1 5.0125 -2.4583 -0.2227 29 1 7.1084 -0.7505 -0.4805 30 1 9.1672 0.3922 -1.7916 31 1 9.1694 -1.3597 -2.1064 32 1 10.5053 0.2583 -6.0598 33 1 12.7060 -0.3410 -7.4624 34 1 13.0954 2.4068 -6.6097 35 1 15.5475 0.4630 -8.0336 36 1 15.5254 1.1856 -5.7110 37 1 14.4430 -0.0297 -4.4488 38 1 13.5031 -0.4334 -2.2099 39 1 11.0635 -0.4826 -1.8880 40 1 5.0118 1.4258 -2.0172 41 1 5.0109 1.2643 -0.2448 42 1 2.7553 0.4014 -2.1116 43 1 2.7543 1.8558 -1.0859 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:01:53 Heat of formation + Delta-G solvation = -54.361129 kcal Electronic energy + Delta-G solvation = -25194.012880 eV Core-core repulsion = 21398.902790 eV Total energy + Delta-G solvation = -3795.110090 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.65956 -41.00258 -39.78647 -38.89112 -37.38366 -37.18692 -35.30063 -32.54799 -32.12584 -32.06497 -31.13405 -28.98945 -26.83158 -24.63339 -24.07025 -23.72937 -22.53336 -21.65602 -21.28170 -19.38114 -18.87820 -18.59096 -17.91371 -17.51733 -17.32879 -17.11840 -16.84573 -16.23306 -16.14364 -15.65727 -15.50978 -15.34725 -15.04606 -14.90778 -14.75256 -14.57334 -14.14262 -13.98126 -13.95574 -13.78547 -13.55571 -13.53621 -13.12738 -13.02288 -12.61403 -12.49215 -12.41019 -12.39212 -12.19515 -11.99925 -11.73495 -11.59257 -11.51119 -10.92665 -10.64054 -10.25628 -9.98561 -9.30960 -4.96609 0.15837 0.36478 1.23082 1.39813 1.42842 1.58619 1.76012 1.79462 1.95521 2.46460 2.62090 2.82837 3.33277 3.37993 3.43436 3.45610 3.59869 3.70435 3.75023 3.82921 3.83530 3.89945 3.95050 3.97213 4.09378 4.14108 4.15559 4.19524 4.32431 4.40653 4.50894 4.53323 4.61765 4.75286 4.77881 4.85194 4.91435 4.92843 5.03647 5.09719 5.19044 5.28734 5.31147 5.40084 5.60746 6.18114 6.32816 6.40113 6.57391 7.03033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.430 5.430 2 C 0.206 3.794 3 C 0.007 3.993 4 H 0.117 0.883 5 C -0.109 4.109 6 C -0.124 4.124 7 C 0.143 3.857 8 H 0.094 0.906 9 N -0.725 5.725 10 C 0.516 3.484 11 O -0.509 6.509 12 C 0.040 3.960 13 O -0.288 6.288 14 C 0.129 3.871 15 C -0.120 4.120 16 C -0.078 4.078 17 C -0.078 4.078 18 O -0.527 6.527 19 Si 0.692 3.308 20 C -0.155 4.155 21 C -0.073 4.073 22 C -0.206 4.206 23 C -0.129 4.129 24 C -0.110 4.110 25 H 0.077 0.923 26 H 0.081 0.919 27 H 0.077 0.923 28 H 0.080 0.920 29 H 0.402 0.598 30 H 0.094 0.906 31 H 0.095 0.905 32 H 0.136 0.864 33 H 0.121 0.879 34 H 0.376 0.624 35 H -0.257 1.257 36 H -0.260 1.260 37 H 0.130 0.870 38 H 0.131 0.869 39 H 0.130 0.870 40 H 0.077 0.923 41 H 0.072 0.928 42 H 0.077 0.923 43 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.596 -2.898 6.918 9.988 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.105 5.105 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.134 0.866 5 C -0.148 4.148 6 C -0.162 4.162 7 C 0.039 3.961 8 H 0.112 0.888 9 N -0.379 5.379 10 C 0.301 3.699 11 O -0.383 6.383 12 C -0.039 4.039 13 O -0.201 6.201 14 C 0.083 3.917 15 C -0.139 4.139 16 C -0.078 4.078 17 C -0.187 4.187 18 O -0.333 6.333 19 Si 0.593 3.407 20 C -0.173 4.173 21 C -0.091 4.091 22 C -0.224 4.224 23 C -0.168 4.168 24 C -0.149 4.149 25 H 0.096 0.904 26 H 0.100 0.900 27 H 0.095 0.905 28 H 0.098 0.902 29 H 0.237 0.763 30 H 0.112 0.888 31 H 0.113 0.887 32 H 0.154 0.846 33 H 0.138 0.862 34 H 0.224 0.776 35 H -0.182 1.182 36 H -0.185 1.185 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.148 0.852 40 H 0.096 0.904 41 H 0.091 0.909 42 H 0.095 0.905 43 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 4.754 -2.670 5.392 7.668 hybrid contribution 0.256 1.024 1.004 1.456 sum 5.009 -1.645 6.395 8.288 Atomic orbital electron populations 1.81292 1.12974 1.07959 1.08251 1.29147 0.95053 0.93587 0.93491 1.18981 0.81421 0.98725 1.02306 0.86568 1.21516 0.94966 0.94145 1.04184 1.21796 0.95259 1.01024 0.98160 1.21099 0.78468 0.96061 1.00476 0.88750 1.45871 1.07341 1.74347 1.10298 1.20038 0.88740 0.77066 0.84062 1.90801 1.69682 1.46272 1.31505 1.22471 0.92858 1.03446 0.85117 1.86176 1.19020 1.86646 1.28219 1.19039 0.81814 0.96428 0.94370 1.20287 0.94525 1.03655 0.95417 1.20094 0.93028 0.98949 0.95734 1.25105 1.12058 0.87109 0.94453 1.86628 1.78574 1.14604 1.53527 0.94883 0.73825 0.91368 0.80633 1.20996 0.99449 1.04050 0.92792 1.20904 0.94311 0.96741 0.97140 1.21296 0.94540 1.08361 0.98227 1.21931 0.94605 0.96776 1.03460 1.21534 0.95487 1.00540 0.97367 0.90381 0.90031 0.90473 0.90179 0.76311 0.88791 0.88715 0.84628 0.86164 0.77619 1.18213 1.18525 0.85304 0.85106 0.85231 0.90405 0.90920 0.90466 0.90289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.84 18.54 42.15 0.78 -1.06 16 2 C 0.21 0.08 14.65 -20.76 -0.30 -0.23 16 3 C 0.01 -0.03 2.56 -93.41 -0.24 -0.27 16 4 H 0.12 -0.68 8.14 -51.93 -0.42 -1.10 16 5 C -0.11 0.51 5.16 -26.73 -0.14 0.37 16 6 C -0.12 0.71 5.39 -26.73 -0.14 0.56 16 7 C 0.14 -0.50 2.45 -67.93 -0.17 -0.67 16 8 H 0.09 -0.11 7.58 -51.93 -0.39 -0.50 16 9 N -0.72 2.80 5.08 -53.81 -0.27 2.52 16 10 C 0.52 -0.10 7.87 -10.98 -0.09 -0.19 16 11 O -0.51 -2.53 16.16 -14.36 -0.23 -2.76 16 12 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 13 O -0.29 -0.63 9.67 -39.36 -0.38 -1.01 16 14 C 0.13 0.16 6.69 -39.22 -0.26 -0.10 16 15 C -0.12 -0.22 9.63 -39.43 -0.38 -0.60 16 16 C -0.08 -0.03 5.35 -104.64 -0.56 -0.59 16 17 C -0.08 0.00 2.80 36.01 0.10 0.10 16 18 O -0.53 -0.85 12.83 -35.23 -0.45 -1.30 16 19 Si 0.69 -0.81 29.88 -169.99 -5.08 -5.89 16 20 C -0.16 0.13 8.67 -39.56 -0.34 -0.22 16 21 C -0.07 0.10 10.04 -39.61 -0.40 -0.29 16 22 C -0.21 0.22 9.04 -39.43 -0.36 -0.14 16 23 C -0.13 0.44 5.49 -26.73 -0.15 0.29 16 24 C -0.11 0.37 5.16 -26.73 -0.14 0.23 16 25 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 26 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 27 H 0.08 -0.54 8.14 -51.93 -0.42 -0.97 16 28 H 0.08 -0.45 8.14 -51.93 -0.42 -0.88 16 29 H 0.40 -2.87 8.60 -40.82 -0.35 -3.22 16 30 H 0.09 -0.43 7.65 -51.93 -0.40 -0.83 16 31 H 0.10 -0.44 7.67 -51.93 -0.40 -0.84 16 32 H 0.14 0.34 8.06 -52.49 -0.42 -0.09 16 33 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -0.50 8.70 45.56 0.40 -0.11 16 35 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 36 H -0.26 -0.14 7.01 56.52 0.40 0.25 16 37 H 0.13 -0.31 4.83 -52.49 -0.25 -0.56 16 38 H 0.13 -0.49 8.06 -52.49 -0.42 -0.91 16 39 H 0.13 -0.49 6.30 -52.49 -0.33 -0.83 16 40 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.07 -0.34 8.14 -51.93 -0.42 -0.77 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 43 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 LS Contribution 361.13 15.07 5.44 5.44 Total: 0.00 -11.45 361.13 -9.56 -21.02 By element: Atomic # 1 Polarization: -9.34 SS G_CDS: -6.00 Total: -15.34 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -3.37 Total: -1.62 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: 0.51 Total: 1.46 kcal Atomic # 8 Polarization: -4.01 SS G_CDS: -1.06 Total: -5.08 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.08 Total: -5.89 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -11.45 -9.56 -21.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.345 kcal (2) G-P(sol) polarization free energy of solvation -11.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds