Wall clock time and date at job start Sun Mar 7 2021 06:02:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37645 * 125.67634 * 2 1 4 4 C 1.46677 * 126.22451 * 359.96436 * 3 2 1 5 5 O 1.21693 * 120.00057 * 5.23820 * 4 3 2 6 6 N 1.34772 * 120.00075 * 185.24302 * 4 3 2 7 7 C 1.46491 * 120.00295 * 174.71761 * 6 4 3 8 8 H 1.09003 * 109.47361 * 34.99890 * 7 6 4 9 9 C 1.53002 * 109.47305 * 155.00064 * 7 6 4 10 10 C 1.53002 * 109.46930 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47663 * 299.99988 * 10 9 7 12 12 H 1.09003 * 109.46638 * 300.00510 * 11 10 9 13 13 C 1.47198 * 109.47141 * 180.02562 * 11 10 9 14 14 N 9.09684 * 112.46898 * 169.61925 * 3 1 2 15 15 C 1.53002 * 109.46938 * 60.00017 * 11 10 9 16 16 C 1.52998 * 109.47436 * 275.00144 * 7 6 4 17 17 C 1.37883 * 107.55037 * 180.22199 * 3 2 1 18 18 C 1.39885 * 107.09114 * 359.58397 * 17 3 2 19 19 Br 1.89094 * 126.07179 * 180.15838 * 18 17 3 20 20 C 1.35505 * 107.84946 * 0.41778 * 18 17 3 21 21 C 1.50697 * 125.56681 * 179.75715 * 20 18 17 22 22 O 1.42901 * 109.47065 * 209.97574 * 21 20 18 23 23 Si 1.86298 * 109.47328 * 329.97697 * 21 20 18 24 24 H 1.09005 * 109.46518 * 93.81604 * 1 2 3 25 25 H 1.08996 * 109.47437 * 213.81619 * 1 2 3 26 26 H 1.09002 * 109.47258 * 333.82071 * 1 2 3 27 27 H 0.97006 * 119.99677 * 354.72178 * 6 4 3 28 28 H 1.08993 * 109.47270 * 60.00379 * 9 7 6 29 29 H 1.09001 * 109.47379 * 299.99961 * 9 7 6 30 30 H 1.09003 * 109.47234 * 60.00439 * 10 9 7 31 31 H 1.09002 * 109.46810 * 179.97438 * 10 9 7 32 32 H 1.09003 * 109.47266 * 59.99992 * 15 11 10 33 33 H 1.09001 * 109.46922 * 180.02562 * 15 11 10 34 34 H 1.09002 * 109.47202 * 59.99681 * 16 7 6 35 35 H 1.09003 * 109.47163 * 300.00172 * 16 7 6 36 36 H 1.07995 * 126.45600 * 179.74243 * 17 3 2 37 37 H 1.09001 * 109.47010 * 89.97960 * 21 20 18 38 38 H 0.96704 * 113.99893 * 179.97438 * 22 21 20 39 39 H 1.48505 * 109.99843 * 178.68166 * 23 21 20 40 40 H 1.48501 * 110.00233 * 299.99678 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 -0.0007 5 8 0.6254 2.7647 0.0948 6 7 2.7075 3.5139 -0.1073 7 6 2.2464 4.8994 -0.2246 8 1 1.3435 5.0335 0.3712 9 6 3.3373 5.8447 0.2827 10 6 2.8558 7.2917 0.1595 11 6 2.5510 7.6049 -1.3067 12 1 3.4540 7.4705 -1.9022 13 6 2.0884 8.9973 -1.4251 14 7 1.7294 10.0718 -1.5147 15 6 1.4601 6.6596 -1.8140 16 6 1.9412 5.2130 -1.6906 17 6 3.5781 0.6892 -0.0051 18 6 3.5529 -0.7094 0.0015 19 35 5.0610 -1.8502 0.0029 20 6 2.2558 -1.1015 0.0010 21 6 1.7714 -2.5285 0.0017 22 8 0.5136 -2.6048 -0.6723 23 14 3.0124 -3.6060 -0.8756 24 1 -0.3632 -0.0684 -1.0255 25 1 -0.3634 -0.8538 0.5719 26 1 -0.3634 0.9223 0.4534 27 1 3.6575 3.3173 -0.1064 28 1 4.2401 5.7107 -0.3131 29 1 3.5548 5.6214 1.3272 30 1 1.9529 7.4262 0.7551 31 1 3.6328 7.9652 0.5214 32 1 0.5571 6.7940 -1.2184 33 1 1.2433 6.8824 -2.8587 34 1 1.1640 4.5395 -2.0521 35 1 2.8440 5.0788 -2.2865 36 1 4.4582 1.3150 -0.0104 37 1 1.6543 -2.8719 1.0295 38 1 0.1413 -3.4965 -0.7104 39 1 2.5616 -5.0208 -0.8539 40 1 3.1810 -3.1482 -2.2781 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:02:06 Heat of formation + Delta-G solvation = -2.597903 kcal Electronic energy + Delta-G solvation = -24914.049420 eV Core-core repulsion = 21162.848371 eV Total energy + Delta-G solvation = -3751.201049 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.052 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.84280 -40.99982 -39.48118 -37.93655 -37.25671 -35.45937 -34.47964 -32.70496 -32.10527 -31.45554 -30.65407 -27.34198 -27.03520 -24.55952 -24.04324 -22.99896 -21.53759 -21.40757 -20.36403 -18.91875 -18.81054 -18.60088 -17.39912 -17.24692 -16.92269 -16.23801 -16.01265 -15.62828 -15.53167 -15.22390 -14.89336 -14.71451 -14.54947 -14.50136 -14.28593 -13.98202 -13.94719 -13.78304 -13.75295 -13.51360 -13.13500 -13.12543 -12.90744 -12.65637 -12.47129 -12.38329 -12.36042 -12.01770 -11.71430 -11.48292 -11.45134 -11.05855 -10.80586 -10.23664 -9.85106 -9.27551 -4.59562 0.21374 0.36411 0.92747 1.28351 1.48222 1.65892 1.77174 1.80573 2.06060 2.20166 2.25319 2.83895 2.86383 3.38376 3.46651 3.47691 3.56187 3.76736 3.79933 3.92633 3.96677 4.11773 4.14720 4.16675 4.19675 4.22325 4.36711 4.40708 4.42464 4.56053 4.61421 4.73684 4.79107 4.81204 4.87928 4.92392 5.04826 5.13039 5.21468 5.35791 5.64370 5.83849 6.22315 6.32954 6.58736 7.04726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.378 5.378 3 C -0.042 4.042 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.144 3.856 8 H 0.096 0.904 9 C -0.125 4.125 10 C -0.108 4.108 11 C 0.007 3.993 12 H 0.117 0.883 13 C 0.206 3.794 14 N -0.430 5.430 15 C -0.109 4.109 16 C -0.129 4.129 17 C -0.102 4.102 18 C -0.185 4.185 19 Br 0.074 6.926 20 C 0.110 3.890 21 C -0.046 4.046 22 O -0.544 6.544 23 Si 0.575 3.425 24 H 0.081 0.919 25 H 0.091 0.909 26 H 0.107 0.893 27 H 0.404 0.596 28 H 0.078 0.922 29 H 0.081 0.919 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.076 0.924 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.073 0.927 36 H 0.160 0.840 37 H 0.088 0.912 38 H 0.387 0.613 39 H -0.236 1.236 40 H -0.244 1.244 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.614 -3.752 2.264 6.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.049 5.049 3 C -0.156 4.156 4 C 0.383 3.617 5 O -0.417 6.417 6 N -0.365 5.365 7 C 0.040 3.960 8 H 0.114 0.886 9 C -0.163 4.163 10 C -0.148 4.148 11 C -0.015 4.015 12 H 0.135 0.865 13 C -0.113 4.113 14 N -0.105 5.105 15 C -0.149 4.149 16 C -0.167 4.167 17 C -0.129 4.129 18 C -0.270 4.270 19 Br 0.158 6.842 20 C -0.013 4.013 21 C -0.155 4.155 22 O -0.352 6.352 23 Si 0.472 3.528 24 H 0.100 0.900 25 H 0.109 0.891 26 H 0.125 0.875 27 H 0.240 0.760 28 H 0.096 0.904 29 H 0.099 0.901 30 H 0.096 0.904 31 H 0.100 0.900 32 H 0.095 0.905 33 H 0.097 0.903 34 H 0.094 0.906 35 H 0.092 0.908 36 H 0.177 0.823 37 H 0.106 0.894 38 H 0.237 0.763 39 H -0.160 1.160 40 H -0.167 1.167 Dipole moment (debyes) X Y Z Total from point charges 3.575 -2.208 1.441 4.442 hybrid contribution -0.988 -0.725 -0.166 1.237 sum 2.587 -2.933 1.275 4.114 Atomic orbital electron populations 1.22439 0.74279 1.05573 1.04688 1.43791 1.07612 1.03579 1.49926 1.20038 0.89709 0.87992 1.17902 1.16806 0.85686 0.83166 0.76054 1.90814 1.16187 1.84501 1.50208 1.45658 1.09823 1.06104 1.74950 1.21105 0.98790 0.79210 0.96938 0.88607 1.21801 0.98188 0.93533 1.02794 1.21511 1.03086 0.96433 0.93725 1.18988 1.00361 0.82624 0.99485 0.86515 1.29175 0.93708 0.94836 0.93533 1.81308 1.08611 1.12519 1.08112 1.21523 0.97539 0.93200 1.02598 1.21928 1.02578 0.95945 0.96297 1.21109 0.95331 0.92399 1.04026 1.20408 0.90092 0.94425 1.22093 1.96297 1.33599 1.56905 1.97436 1.19700 0.88888 0.88023 1.04660 1.24325 0.93907 0.95465 1.01843 1.86479 1.34452 1.34867 1.79406 0.93385 0.93763 0.79404 0.86250 0.90014 0.89060 0.87511 0.76046 0.90381 0.90075 0.90422 0.90017 0.90511 0.90320 0.90580 0.90801 0.82259 0.89424 0.76349 1.15989 1.16712 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.07 9.39 59.85 0.56 0.63 16 2 N -0.38 -0.68 3.16 -115.59 -0.37 -1.04 16 3 C -0.04 -0.04 6.88 -81.98 -0.56 -0.60 16 4 C 0.60 0.44 7.74 -12.86 -0.10 0.34 16 5 O -0.54 -2.03 14.20 5.19 0.07 -1.96 16 6 N -0.71 1.99 5.06 -55.12 -0.28 1.71 16 7 C 0.14 -0.47 2.50 -67.94 -0.17 -0.64 16 8 H 0.10 -0.13 7.51 -51.93 -0.39 -0.52 16 9 C -0.13 0.68 5.39 -26.73 -0.14 0.53 16 10 C -0.11 0.50 5.16 -26.73 -0.14 0.36 16 11 C 0.01 -0.03 2.56 -93.41 -0.24 -0.27 16 12 H 0.12 -0.67 8.14 -51.93 -0.42 -1.09 16 13 C 0.21 0.08 14.65 -20.75 -0.30 -0.23 16 14 N -0.43 -1.84 18.54 42.17 0.78 -1.06 16 15 C -0.11 0.37 5.16 -26.76 -0.14 0.24 16 16 C -0.13 0.43 5.49 -26.76 -0.15 0.28 16 17 C -0.10 0.09 10.34 -39.10 -0.40 -0.32 16 18 C -0.19 -0.06 6.16 -39.94 -0.25 -0.31 16 19 Br 0.07 -0.09 28.25 -68.01 -1.92 -2.01 16 20 C 0.11 0.15 6.18 -81.91 -0.51 -0.36 16 21 C -0.05 0.00 2.89 36.00 0.10 0.10 16 22 O -0.54 -0.01 10.45 -35.23 -0.37 -0.38 16 23 Si 0.58 0.41 27.11 -169.99 -4.61 -4.20 16 24 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 25 H 0.09 -0.01 7.05 -51.93 -0.37 -0.38 16 26 H 0.11 0.18 6.01 -51.93 -0.31 -0.14 16 27 H 0.40 -2.15 7.50 -40.82 -0.31 -2.46 16 28 H 0.08 -0.52 8.14 -51.93 -0.42 -0.95 16 29 H 0.08 -0.43 8.14 -51.93 -0.42 -0.86 16 30 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 36 H 0.16 -0.67 7.45 -52.49 -0.39 -1.06 16 37 H 0.09 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.39 -1.43 8.74 45.56 0.40 -1.03 16 39 H -0.24 -0.48 7.11 56.52 0.40 -0.08 16 40 H -0.24 -1.04 7.11 56.52 0.40 -0.64 16 LS Contribution 345.12 15.07 5.20 5.20 Total: 0.00 -9.02 345.12 -9.12 -18.14 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: -5.21 Total: -14.18 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -2.43 Total: -0.24 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: 0.14 Total: -0.39 kcal Atomic # 8 Polarization: -2.04 SS G_CDS: -0.29 Total: -2.33 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -4.61 Total: -4.20 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -1.92 Total: -2.01 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -9.02 -9.12 -18.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.546 kcal (2) G-P(sol) polarization free energy of solvation -9.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds