Wall clock time and date at job start Sun Mar 7 2021 06:02:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37645 * 125.67634 * 2 1 4 4 C 1.46677 * 126.22451 * 359.96436 * 3 2 1 5 5 O 1.21693 * 120.00057 * 5.23820 * 4 3 2 6 6 N 1.34772 * 120.00075 * 185.24302 * 4 3 2 7 7 C 1.46491 * 120.00295 * 174.71761 * 6 4 3 8 8 H 1.09003 * 109.47361 * 34.99890 * 7 6 4 9 9 C 1.53002 * 109.47305 * 155.00064 * 7 6 4 10 10 C 1.53002 * 109.46930 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47663 * 299.99988 * 10 9 7 12 12 H 1.09003 * 109.46638 * 300.00510 * 11 10 9 13 13 C 1.47198 * 109.47141 * 180.02562 * 11 10 9 14 14 N 9.09684 * 112.46898 * 169.61925 * 3 1 2 15 15 C 1.53002 * 109.46938 * 60.00017 * 11 10 9 16 16 C 1.52998 * 109.47436 * 275.00144 * 7 6 4 17 17 C 1.37883 * 107.55037 * 180.22199 * 3 2 1 18 18 C 1.39885 * 107.09114 * 359.58397 * 17 3 2 19 19 Br 1.89094 * 126.07179 * 180.15838 * 18 17 3 20 20 C 1.35505 * 107.84946 * 0.41778 * 18 17 3 21 21 C 1.50697 * 125.56681 * 179.75715 * 20 18 17 22 22 O 1.42901 * 109.47065 * 209.97574 * 21 20 18 23 23 Si 1.86298 * 109.47328 * 329.97697 * 21 20 18 24 24 H 1.09005 * 109.46518 * 93.81604 * 1 2 3 25 25 H 1.08996 * 109.47437 * 213.81619 * 1 2 3 26 26 H 1.09002 * 109.47258 * 333.82071 * 1 2 3 27 27 H 0.97006 * 119.99677 * 354.72178 * 6 4 3 28 28 H 1.08993 * 109.47270 * 60.00379 * 9 7 6 29 29 H 1.09001 * 109.47379 * 299.99961 * 9 7 6 30 30 H 1.09003 * 109.47234 * 60.00439 * 10 9 7 31 31 H 1.09002 * 109.46810 * 179.97438 * 10 9 7 32 32 H 1.09003 * 109.47266 * 59.99992 * 15 11 10 33 33 H 1.09001 * 109.46922 * 180.02562 * 15 11 10 34 34 H 1.09002 * 109.47202 * 59.99681 * 16 7 6 35 35 H 1.09003 * 109.47163 * 300.00172 * 16 7 6 36 36 H 1.07995 * 126.45600 * 179.74243 * 17 3 2 37 37 H 1.09001 * 109.47010 * 89.97960 * 21 20 18 38 38 H 0.96704 * 113.99893 * 179.97438 * 22 21 20 39 39 H 1.48505 * 109.99843 * 178.68166 * 23 21 20 40 40 H 1.48501 * 110.00233 * 299.99678 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 -0.0007 5 8 0.6254 2.7647 0.0948 6 7 2.7075 3.5139 -0.1073 7 6 2.2464 4.8994 -0.2246 8 1 1.3435 5.0335 0.3712 9 6 3.3373 5.8447 0.2827 10 6 2.8558 7.2917 0.1595 11 6 2.5510 7.6049 -1.3067 12 1 3.4540 7.4705 -1.9022 13 6 2.0884 8.9973 -1.4251 14 7 1.7294 10.0718 -1.5147 15 6 1.4601 6.6596 -1.8140 16 6 1.9412 5.2130 -1.6906 17 6 3.5781 0.6892 -0.0051 18 6 3.5529 -0.7094 0.0015 19 35 5.0610 -1.8502 0.0029 20 6 2.2558 -1.1015 0.0010 21 6 1.7714 -2.5285 0.0017 22 8 0.5136 -2.6048 -0.6723 23 14 3.0124 -3.6060 -0.8756 24 1 -0.3632 -0.0684 -1.0255 25 1 -0.3634 -0.8538 0.5719 26 1 -0.3634 0.9223 0.4534 27 1 3.6575 3.3173 -0.1064 28 1 4.2401 5.7107 -0.3131 29 1 3.5548 5.6214 1.3272 30 1 1.9529 7.4262 0.7551 31 1 3.6328 7.9652 0.5214 32 1 0.5571 6.7940 -1.2184 33 1 1.2433 6.8824 -2.8587 34 1 1.1640 4.5395 -2.0521 35 1 2.8440 5.0788 -2.2865 36 1 4.4582 1.3150 -0.0104 37 1 1.6543 -2.8719 1.0295 38 1 0.1413 -3.4965 -0.7104 39 1 2.5616 -5.0208 -0.8539 40 1 3.1810 -3.1482 -2.2781 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:02:05 Heat of formation + Delta-G solvation = -2.341714 kcal Electronic energy + Delta-G solvation = -24914.038311 eV Core-core repulsion = 21162.848371 eV Total energy + Delta-G solvation = -3751.189940 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.052 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.82726 -40.86698 -39.40175 -37.91568 -37.32842 -35.41048 -34.47210 -32.66141 -31.79541 -31.41416 -30.53583 -27.35566 -27.00072 -24.41400 -23.75185 -22.93247 -21.39132 -21.28494 -20.32823 -18.83537 -18.69015 -18.56625 -17.36034 -17.17204 -16.89280 -16.17753 -15.93684 -15.57409 -15.32875 -15.17741 -14.78254 -14.68501 -14.58485 -14.47149 -14.24133 -14.00126 -13.90580 -13.79826 -13.70085 -13.23214 -13.15046 -13.02413 -12.92355 -12.75303 -12.28805 -12.14338 -12.06010 -11.97701 -11.55715 -11.42240 -11.24148 -11.08496 -10.79502 -10.11569 -9.83195 -9.25838 -4.67327 0.21008 0.38236 0.92951 1.28557 1.44027 1.61185 1.74893 1.78660 1.96508 2.21072 2.32676 2.94925 2.95928 3.48993 3.60390 3.71922 3.76261 3.84164 4.04243 4.18909 4.21784 4.23643 4.25773 4.33077 4.41575 4.43757 4.45351 4.54800 4.64612 4.67103 4.76800 4.88753 5.06715 5.14367 5.20683 5.22600 5.29939 5.37093 5.38061 5.56212 5.66711 5.82833 6.43417 6.50316 6.58581 7.14494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.392 5.392 3 C -0.061 4.061 4 C 0.592 3.408 5 O -0.579 6.579 6 N -0.696 5.696 7 C 0.143 3.857 8 H 0.071 0.929 9 C -0.114 4.114 10 C -0.106 4.106 11 C 0.013 3.987 12 H 0.151 0.849 13 C 0.236 3.764 14 N -0.505 5.505 15 C -0.106 4.106 16 C -0.121 4.121 17 C -0.087 4.087 18 C -0.195 4.195 19 Br 0.093 6.907 20 C 0.092 3.908 21 C -0.044 4.044 22 O -0.557 6.557 23 Si 0.621 3.379 24 H 0.073 0.927 25 H 0.100 0.900 26 H 0.096 0.904 27 H 0.420 0.580 28 H 0.105 0.895 29 H 0.087 0.913 30 H 0.065 0.935 31 H 0.092 0.908 32 H 0.062 0.938 33 H 0.078 0.922 34 H 0.050 0.950 35 H 0.095 0.905 36 H 0.195 0.805 37 H 0.110 0.890 38 H 0.402 0.598 39 H -0.255 1.255 40 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.859 -4.107 2.771 8.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.064 5.064 3 C -0.175 4.175 4 C 0.379 3.621 5 O -0.460 6.460 6 N -0.347 5.347 7 C 0.038 3.962 8 H 0.089 0.911 9 C -0.152 4.152 10 C -0.146 4.146 11 C -0.008 4.008 12 H 0.168 0.832 13 C -0.081 4.081 14 N -0.181 5.181 15 C -0.145 4.145 16 C -0.160 4.160 17 C -0.114 4.114 18 C -0.281 4.281 19 Br 0.177 6.823 20 C -0.031 4.031 21 C -0.154 4.154 22 O -0.368 6.368 23 Si 0.523 3.477 24 H 0.092 0.908 25 H 0.118 0.882 26 H 0.114 0.886 27 H 0.258 0.742 28 H 0.123 0.877 29 H 0.105 0.895 30 H 0.084 0.916 31 H 0.110 0.890 32 H 0.080 0.920 33 H 0.097 0.903 34 H 0.069 0.931 35 H 0.114 0.886 36 H 0.212 0.788 37 H 0.127 0.873 38 H 0.254 0.746 39 H -0.180 1.180 40 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges 5.861 -2.568 1.966 6.694 hybrid contribution -1.670 -0.681 -0.384 1.844 sum 4.191 -3.249 1.582 5.534 Atomic orbital electron populations 1.22320 0.74529 1.05342 1.04153 1.43919 1.07771 1.04115 1.50549 1.20277 0.90383 0.87899 1.18900 1.16955 0.85530 0.83753 0.75820 1.90796 1.17900 1.85004 1.52305 1.45550 1.10203 1.05619 1.73325 1.21145 0.98952 0.79351 0.96706 0.91104 1.21750 0.98015 0.91828 1.03583 1.21514 1.03014 0.97306 0.92732 1.19272 1.01089 0.79757 1.00722 0.83199 1.29927 0.91717 0.95171 0.91257 1.81329 1.11080 1.14998 1.10720 1.21466 0.97289 0.93387 1.02401 1.21844 1.02633 0.95094 0.96426 1.21533 0.95677 0.92243 1.01926 1.20631 0.90201 0.95245 1.21986 1.96298 1.32414 1.56325 1.97310 1.20024 0.89494 0.88436 1.05109 1.24313 0.93487 0.94802 1.02812 1.86454 1.34415 1.36375 1.79528 0.92931 0.93668 0.77857 0.83259 0.90845 0.88180 0.88595 0.74199 0.87659 0.89490 0.91634 0.88951 0.91952 0.90295 0.93128 0.88649 0.78815 0.87266 0.74648 1.18004 1.22237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.26 9.39 127.77 1.20 1.46 16 2 N -0.39 -1.64 3.16 -519.61 -1.64 -3.28 16 3 C -0.06 -0.10 6.88 40.35 0.28 0.18 16 4 C 0.59 1.11 7.74 86.45 0.67 1.78 16 5 O -0.58 -5.42 14.20 -4.33 -0.06 -5.48 16 6 N -0.70 4.56 5.06 -446.52 -2.26 2.30 16 7 C 0.14 -1.03 2.50 44.99 0.11 -0.91 16 8 H 0.07 -0.11 7.51 -2.39 -0.02 -0.13 16 9 C -0.11 1.50 5.39 30.60 0.16 1.66 16 10 C -0.11 1.14 5.16 30.59 0.16 1.29 16 11 C 0.01 -0.12 2.56 -12.60 -0.03 -0.15 16 12 H 0.15 -2.23 8.14 -2.39 -0.02 -2.25 16 13 C 0.24 0.20 14.65 89.44 1.31 1.51 16 14 N -0.50 -4.92 18.54 20.01 0.37 -4.55 16 15 C -0.11 0.74 5.16 30.58 0.16 0.90 16 16 C -0.12 0.87 5.49 30.58 0.17 1.04 16 17 C -0.09 0.27 10.34 22.58 0.23 0.50 16 18 C -0.20 0.02 6.16 22.04 0.14 0.16 16 19 Br 0.09 -0.31 28.25 -20.37 -0.58 -0.88 16 20 C 0.09 0.25 6.18 41.34 0.26 0.51 16 21 C -0.04 0.00 2.89 71.23 0.21 0.20 16 22 O -0.56 -0.22 10.45 -148.98 -1.56 -1.78 16 23 Si 0.62 1.21 27.11 68.60 1.86 3.07 16 24 H 0.07 0.32 8.14 -2.38 -0.02 0.30 16 25 H 0.10 0.08 7.05 -2.39 -0.02 0.06 16 26 H 0.10 0.53 6.01 -2.39 -0.01 0.52 16 27 H 0.42 -5.51 7.50 -92.70 -0.70 -6.20 16 28 H 0.10 -1.87 8.14 -2.39 -0.02 -1.89 16 29 H 0.09 -1.15 8.14 -2.39 -0.02 -1.17 16 30 H 0.06 -0.51 8.14 -2.39 -0.02 -0.53 16 31 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 32 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 34 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 36 H 0.19 -2.21 7.45 -2.91 -0.02 -2.23 16 37 H 0.11 -0.48 7.96 -2.39 -0.02 -0.50 16 38 H 0.40 -2.90 8.74 -74.05 -0.65 -3.55 16 39 H -0.26 -1.21 7.11 99.48 0.71 -0.50 16 40 H -0.30 -3.12 7.11 99.48 0.71 -2.41 16 Total: 0.00 -24.96 345.12 0.94 -24.03 By element: Atomic # 1 Polarization: -23.34 SS G_CDS: -0.21 Total: -23.55 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 5.02 Total: 10.12 kcal Atomic # 7 Polarization: -1.99 SS G_CDS: -3.53 Total: -5.52 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.62 Total: -7.26 kcal Atomic # 14 Polarization: 1.21 SS G_CDS: 1.86 Total: 3.07 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.58 Total: -0.88 kcal Total: -24.96 0.94 -24.03 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.686 kcal (2) G-P(sol) polarization free energy of solvation -24.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.028 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds