Wall clock time and date at job start Sun Mar 7 2021 06:02:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 C 1.46901 * 110.99782 * 2 1 4 4 C 1.50701 * 109.47186 * 293.94840 * 3 2 1 5 5 O 1.21275 * 119.99632 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99875 * 179.97438 * 4 3 2 7 7 C 1.46497 * 119.99664 * 179.97438 * 6 4 3 8 8 H 1.09002 * 109.46915 * 35.00835 * 7 6 4 9 9 C 1.53002 * 109.46729 * 155.00120 * 7 6 4 10 10 C 1.52997 * 109.46978 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.47415 * 300.00098 * 10 9 7 12 12 H 1.09002 * 109.47070 * 300.00053 * 11 10 9 13 13 C 1.47194 * 109.47253 * 179.97438 * 11 10 9 14 14 N 9.14932 * 108.76558 * 123.71328 * 3 1 2 15 15 C 1.52997 * 109.46817 * 59.99873 * 11 10 9 16 16 C 1.52992 * 109.47482 * 300.00014 * 15 11 10 17 17 C 1.39673 * 110.99630 * 123.95013 * 2 1 3 18 18 C 1.38893 * 120.07407 * 116.04775 * 17 2 1 19 19 C 1.50699 * 120.03733 * 0.02562 * 18 17 2 20 20 O 1.42902 * 109.46656 * 284.99585 * 19 18 17 21 21 Si 1.86295 * 109.47380 * 164.99870 * 19 18 17 22 22 C 1.38123 * 119.92616 * 179.97438 * 18 17 2 23 23 C 1.38260 * 120.07349 * 0.02940 * 22 18 17 24 24 C 1.50706 * 119.92517 * 179.97438 * 23 22 18 25 25 F 1.39896 * 109.47401 * 89.99769 * 24 23 22 26 26 F 1.39899 * 109.47107 * 210.00082 * 24 23 22 27 27 F 1.39903 * 109.47050 * 329.99662 * 24 23 22 28 28 C 1.38304 * 120.15593 * 359.96966 * 23 22 18 29 29 C 1.38091 * 120.07066 * 359.75117 * 28 23 22 30 30 H 1.09001 * 109.46590 * 60.00244 * 1 2 3 31 31 H 1.08992 * 109.46861 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.46975 * 300.00523 * 1 2 3 33 33 H 1.09006 * 109.46886 * 173.94682 * 3 2 1 34 34 H 1.09006 * 109.47346 * 53.95405 * 3 2 1 35 35 H 0.97000 * 119.99923 * 0.02562 * 6 4 3 36 36 H 1.09002 * 109.47097 * 60.00183 * 9 7 6 37 37 H 1.08998 * 109.47844 * 300.00398 * 9 7 6 38 38 H 1.09000 * 109.47140 * 180.02562 * 10 9 7 39 39 H 1.09002 * 109.47497 * 60.00450 * 10 9 7 40 40 H 1.09002 * 109.47153 * 60.00231 * 15 11 10 41 41 H 1.08998 * 109.47533 * 179.97438 * 15 11 10 42 42 H 1.09002 * 109.47103 * 300.00247 * 16 15 11 43 43 H 1.08996 * 109.47747 * 179.97438 * 16 15 11 44 44 H 1.08998 * 109.47234 * 44.99571 * 19 18 17 45 45 H 0.96702 * 114.00075 * 60.00490 * 20 19 18 46 46 H 1.48497 * 109.99949 * 299.99766 * 21 19 18 47 47 H 1.48503 * 110.00162 * 61.31722 * 21 19 18 48 48 H 1.08004 * 119.96528 * 180.02562 * 22 18 17 49 49 H 1.07996 * 119.97067 * 180.02562 * 28 23 22 50 50 H 1.07996 * 120.04306 * 180.27176 * 29 28 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.6370 2.0471 -1.2985 5 8 1.0049 1.4455 -2.1407 6 7 2.0181 3.3202 -1.5233 7 6 1.6701 3.9768 -2.7858 8 1 0.6903 3.6322 -3.1166 9 6 1.6347 5.4924 -2.5796 10 6 1.2719 6.1782 -3.8982 11 6 2.3196 5.8321 -4.9582 12 1 3.2992 6.1767 -4.6270 13 6 1.9702 6.4914 -6.2270 14 7 1.6976 7.0012 -7.2061 15 6 2.3550 4.3165 -5.1645 16 6 2.7178 3.6307 -3.8459 17 6 1.9695 -0.7282 1.0817 18 6 2.7117 -1.8813 0.8608 19 6 2.9787 -2.3484 -0.5469 20 8 1.7920 -2.9321 -1.0882 21 14 4.3434 -3.6164 -0.5321 22 6 3.2056 -2.5988 1.9327 23 6 2.9614 -2.1708 3.2245 24 6 3.5014 -2.9565 4.3916 25 9 4.7748 -2.4821 4.7241 26 9 2.6470 -2.8076 5.4893 27 9 3.5836 -4.3094 4.0449 28 6 2.2228 -1.0230 3.4482 29 6 1.7309 -0.2978 2.3810 30 1 -0.3632 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 3.0798 1.3444 0.1084 34 1 1.5611 1.9274 0.8309 35 1 2.5234 3.8014 -0.8495 36 1 2.6145 5.8371 -2.2487 37 1 0.8888 5.7391 -1.8241 38 1 1.2472 7.2580 -3.7514 39 1 0.2923 5.8337 -4.2295 40 1 1.3753 3.9719 -5.4957 41 1 3.1009 4.0699 -5.9199 42 1 3.6974 3.9753 -3.5146 43 1 2.7425 2.5509 -3.9926 44 1 3.2785 -1.4991 -1.1608 45 1 1.0383 -2.3274 -1.1264 46 1 5.5832 -3.0218 0.0287 47 1 3.9343 -4.7935 0.2755 48 1 3.7831 -3.4953 1.7616 49 1 2.0342 -0.6912 4.4584 50 1 1.1580 0.6008 2.5561 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:02:18 Heat of formation + Delta-G solvation = -149.668973 kcal Electronic energy + Delta-G solvation = -37891.313003 eV Core-core repulsion = 32470.351552 eV Total energy + Delta-G solvation = -5420.961451 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.160 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.36437 -48.89100 -48.82593 -41.82977 -40.90066 -39.57924 -37.80546 -37.58013 -37.14575 -35.07891 -33.08953 -32.26569 -31.77097 -31.22594 -28.97976 -27.67560 -26.97019 -25.29787 -24.28548 -23.72236 -23.32398 -22.08643 -21.35538 -20.95695 -19.71549 -19.66255 -19.54925 -18.71443 -18.43672 -18.15253 -17.80176 -17.12592 -16.93585 -16.46012 -16.26297 -15.95731 -15.77873 -15.73932 -15.63460 -15.41675 -15.31081 -15.25261 -15.04148 -14.99528 -14.98481 -14.87784 -14.77503 -14.61790 -14.42689 -14.12177 -13.95968 -13.87104 -13.69949 -13.59008 -13.32049 -13.22035 -13.11535 -12.94800 -12.74934 -12.60030 -12.29044 -12.24998 -12.09286 -12.04640 -11.42216 -11.39619 -11.20218 -11.05260 -10.76937 -10.33528 -10.16833 -9.94907 -9.63087 -4.87521 -0.46368 -0.09601 1.32803 1.44333 1.57819 1.71966 1.74667 1.77931 1.89686 1.97723 2.09423 2.50034 2.71219 2.79596 2.96992 3.19846 3.43323 3.48849 3.69465 3.76331 3.77549 3.83731 3.98629 3.99979 4.07356 4.07463 4.18897 4.25800 4.28389 4.31099 4.38415 4.44019 4.46278 4.47932 4.49811 4.56380 4.57891 4.75343 4.83517 4.87731 4.90733 5.00503 5.08106 5.11908 5.16494 5.22552 5.23834 5.29713 5.38787 5.44912 5.59802 5.66836 6.05718 6.58373 6.62700 6.68382 7.39305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.502 5.502 3 C 0.036 3.964 4 C 0.515 3.485 5 O -0.558 6.558 6 N -0.714 5.714 7 C 0.144 3.856 8 H 0.067 0.933 9 C -0.113 4.113 10 C -0.107 4.107 11 C 0.013 3.987 12 H 0.148 0.852 13 C 0.235 3.765 14 N -0.505 5.505 15 C -0.107 4.107 16 C -0.119 4.119 17 C 0.137 3.863 18 C -0.099 4.099 19 C -0.069 4.069 20 O -0.545 6.545 21 Si 0.785 3.215 22 C -0.084 4.084 23 C -0.188 4.188 24 C 0.506 3.494 25 F -0.179 7.179 26 F -0.174 7.174 27 F -0.186 7.186 28 C -0.052 4.052 29 C -0.134 4.134 30 H 0.086 0.914 31 H 0.069 0.931 32 H 0.047 0.953 33 H 0.121 0.879 34 H 0.100 0.900 35 H 0.417 0.583 36 H 0.100 0.900 37 H 0.084 0.916 38 H 0.088 0.912 39 H 0.064 0.936 40 H 0.061 0.939 41 H 0.077 0.923 42 H 0.091 0.909 43 H 0.054 0.946 44 H 0.092 0.908 45 H 0.372 0.628 46 H -0.260 1.260 47 H -0.290 1.290 48 H 0.125 0.875 49 H 0.160 0.840 50 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.950 6.260 4.715 8.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.223 5.223 3 C -0.093 4.093 4 C 0.301 3.699 5 O -0.435 6.435 6 N -0.367 5.367 7 C 0.039 3.961 8 H 0.085 0.915 9 C -0.151 4.151 10 C -0.147 4.147 11 C -0.008 4.008 12 H 0.166 0.834 13 C -0.082 4.082 14 N -0.182 5.182 15 C -0.146 4.146 16 C -0.158 4.158 17 C 0.043 3.957 18 C -0.100 4.100 19 C -0.178 4.178 20 O -0.352 6.352 21 Si 0.688 3.312 22 C -0.103 4.103 23 C -0.189 4.189 24 C 0.452 3.548 25 F -0.160 7.160 26 F -0.155 7.155 27 F -0.167 7.167 28 C -0.071 4.071 29 C -0.153 4.153 30 H 0.105 0.895 31 H 0.087 0.913 32 H 0.066 0.934 33 H 0.139 0.861 34 H 0.118 0.882 35 H 0.254 0.746 36 H 0.119 0.881 37 H 0.102 0.898 38 H 0.107 0.893 39 H 0.083 0.917 40 H 0.079 0.921 41 H 0.096 0.904 42 H 0.110 0.890 43 H 0.073 0.927 44 H 0.110 0.890 45 H 0.222 0.778 46 H -0.186 1.186 47 H -0.218 1.218 48 H 0.142 0.858 49 H 0.177 0.823 50 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 2.173 5.421 2.640 6.409 hybrid contribution -0.910 0.907 2.121 2.480 sum 1.264 6.328 4.761 8.020 Atomic orbital electron populations 1.22650 0.83806 1.03175 1.02699 1.59173 1.09931 1.13568 1.39669 1.22195 1.03447 0.87757 0.95873 1.20601 0.78710 0.81940 0.88605 1.90719 1.40547 1.64680 1.47589 1.45893 1.57712 1.13064 1.20030 1.21000 0.98425 0.93132 0.83518 0.91517 1.21727 1.04806 0.91557 0.97030 1.21516 0.97606 1.02221 0.93316 1.19275 1.03405 0.94342 0.83818 0.83429 1.29981 0.91485 0.92068 0.94628 1.81352 1.11088 1.11721 1.13998 1.21481 1.02978 0.91573 0.98595 1.21824 1.00085 1.00229 0.93674 1.18824 0.94547 0.92724 0.89601 1.20323 0.98451 0.95230 0.95999 1.25168 0.95847 1.07031 0.89757 1.86679 1.21668 1.42107 1.84723 0.92409 0.74193 0.76324 0.88292 1.20786 0.98768 0.99056 0.91652 1.19972 1.06852 1.00203 0.91900 1.18422 0.75779 0.77539 0.83027 1.93232 1.41289 1.88091 1.93388 1.93203 1.70287 1.95403 1.56604 1.93196 1.96173 1.35323 1.92058 1.21133 0.92913 0.91294 1.01767 1.21971 1.00458 1.01577 0.91333 0.89533 0.91259 0.93411 0.86070 0.88222 0.74596 0.88125 0.89770 0.89324 0.91691 0.92060 0.90439 0.89035 0.92743 0.88964 0.77831 1.18576 1.21772 0.85804 0.82265 0.81535 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 8.63 127.69 1.10 1.00 16 2 N -0.50 2.40 3.22 -724.40 -2.33 0.07 16 3 C 0.04 -0.35 5.03 85.56 0.43 0.08 16 4 C 0.52 -2.97 7.52 87.66 0.66 -2.31 16 5 O -0.56 -1.86 13.97 -3.01 -0.04 -1.90 16 6 N -0.71 8.29 5.08 -442.53 -2.25 6.04 16 7 C 0.14 -1.42 2.46 44.99 0.11 -1.31 16 8 H 0.07 -0.27 7.58 -2.39 -0.02 -0.28 16 9 C -0.11 1.66 5.39 30.59 0.16 1.83 16 10 C -0.11 1.23 5.16 30.59 0.16 1.39 16 11 C 0.01 -0.12 2.57 -12.60 -0.03 -0.16 16 12 H 0.15 -2.26 8.14 -2.39 -0.02 -2.28 16 13 C 0.24 0.08 14.65 89.43 1.31 1.39 16 14 N -0.51 -4.69 18.54 20.02 0.37 -4.32 16 15 C -0.11 0.86 5.16 30.59 0.16 1.01 16 16 C -0.12 1.09 5.49 30.59 0.17 1.26 16 17 C 0.14 -0.44 4.61 38.22 0.18 -0.27 16 18 C -0.10 -0.13 5.28 -19.74 -0.10 -0.23 16 19 C -0.07 -0.10 2.30 71.24 0.16 0.06 16 20 O -0.54 -2.34 12.65 -148.98 -1.89 -4.22 16 21 Si 0.79 1.05 30.40 68.60 2.09 3.13 16 22 C -0.08 -0.32 8.01 22.25 0.18 -0.14 16 23 C -0.19 -0.38 5.46 -19.84 -0.11 -0.49 16 24 C 0.51 2.25 3.36 71.24 0.24 2.49 16 25 F -0.18 -0.97 17.30 44.97 0.78 -0.19 16 26 F -0.17 -0.68 16.46 44.97 0.74 0.06 16 27 F -0.19 -1.43 16.46 44.97 0.74 -0.69 16 28 C -0.05 0.18 9.39 22.25 0.21 0.39 16 29 C -0.13 0.86 8.71 22.40 0.20 1.05 16 30 H 0.09 -0.07 5.88 -2.39 -0.01 -0.08 16 31 H 0.07 -0.24 7.53 -2.39 -0.02 -0.26 16 32 H 0.05 -0.37 7.49 -2.39 -0.02 -0.39 16 33 H 0.12 -1.46 8.06 -2.38 -0.02 -1.48 16 34 H 0.10 -1.49 7.46 -2.38 -0.02 -1.51 16 35 H 0.42 -7.48 8.60 -92.71 -0.80 -8.27 16 36 H 0.10 -1.88 8.14 -2.39 -0.02 -1.90 16 37 H 0.08 -1.24 8.14 -2.39 -0.02 -1.26 16 38 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 39 H 0.06 -0.55 8.14 -2.39 -0.02 -0.57 16 40 H 0.06 -0.29 8.14 -2.39 -0.02 -0.31 16 41 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 42 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 43 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.09 -0.03 7.78 -2.39 -0.02 -0.05 16 45 H 0.37 0.61 7.59 -74.06 -0.56 0.05 16 46 H -0.26 -0.85 7.11 99.48 0.71 -0.15 16 47 H -0.29 -2.31 6.81 99.48 0.68 -1.63 16 48 H 0.12 0.73 4.48 -2.91 -0.01 0.72 16 49 H 0.16 -1.16 7.60 -2.91 -0.02 -1.18 16 50 H 0.17 -2.07 7.16 -2.91 -0.02 -2.09 16 Total: 0.00 -24.09 417.63 3.05 -21.04 By element: Atomic # 1 Polarization: -25.72 SS G_CDS: -0.33 Total: -26.05 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: 5.18 Total: 7.04 kcal Atomic # 7 Polarization: 5.99 SS G_CDS: -4.21 Total: 1.79 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -1.93 Total: -6.13 kcal Atomic # 9 Polarization: -3.07 SS G_CDS: 2.26 Total: -0.82 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: 2.09 Total: 3.13 kcal Total: -24.09 3.05 -21.04 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.633 kcal (2) G-P(sol) polarization free energy of solvation -24.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.724 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.036 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds