Wall clock time and date at job start Sun Mar 7 2021 06:02:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47090 * 355.38168 * 3 2 1 5 5 C 1.52997 * 109.47080 * 115.38144 * 3 2 1 6 6 C 1.52996 * 109.47165 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.46972 * 300.00293 * 6 5 3 8 8 H 1.09000 * 109.46986 * 299.99742 * 7 6 5 9 9 N 1.46496 * 109.47428 * 180.02562 * 7 6 5 10 10 C 1.34777 * 120.00336 * 84.99288 * 9 7 6 11 11 O 1.21280 * 119.99650 * 0.02562 * 10 9 7 12 12 C 1.50706 * 120.00082 * 180.02562 * 10 9 7 13 13 N 1.46503 * 109.46884 * 180.02562 * 12 10 9 14 14 C 1.36835 * 125.06032 * 265.02785 * 13 12 10 15 15 C 1.34233 * 109.93880 * 179.97438 * 14 13 12 16 16 C 1.50704 * 126.50283 * 180.02562 * 15 14 13 17 17 O 1.42901 * 109.46777 * 254.97084 * 16 15 14 18 18 Si 1.86297 * 109.46942 * 14.96951 * 16 15 14 19 19 C 1.46498 * 106.99987 * 359.97438 * 15 14 13 20 20 C 1.39588 * 134.03990 * 180.02562 * 19 15 14 21 21 C 1.36662 * 119.76082 * 179.97438 * 20 19 15 22 22 C 1.38790 * 120.53269 * 0.02562 * 21 20 19 23 23 C 1.37789 * 120.66626 * 359.97438 * 22 21 20 24 24 C 1.37685 * 125.06218 * 84.72020 * 13 12 10 25 25 C 1.52997 * 109.47415 * 59.99860 * 7 6 5 26 26 C 1.52999 * 109.46670 * 235.38417 * 3 2 1 27 27 H 1.09000 * 109.47140 * 60.00053 * 5 3 2 28 28 H 1.09001 * 109.47375 * 300.00036 * 5 3 2 29 29 H 1.08992 * 109.47534 * 180.02562 * 6 5 3 30 30 H 1.08996 * 109.47134 * 59.99508 * 6 5 3 31 31 H 0.97005 * 119.99981 * 264.99973 * 9 7 6 32 32 H 1.08990 * 109.47224 * 300.00188 * 12 10 9 33 33 H 1.08999 * 109.46660 * 60.00281 * 12 10 9 34 34 H 1.08004 * 125.03234 * 359.95712 * 14 13 12 35 35 H 1.08990 * 109.47063 * 134.97336 * 16 15 14 36 36 H 0.96703 * 113.99857 * 60.00011 * 17 16 15 37 37 H 1.48497 * 109.99784 * 180.02562 * 18 16 15 38 38 H 1.48501 * 110.00143 * 301.32028 * 18 16 15 39 39 H 1.07991 * 120.11871 * 359.94927 * 20 19 15 40 40 H 1.07999 * 119.73290 * 180.02562 * 21 20 19 41 41 H 1.07998 * 119.66309 * 179.97438 * 22 21 20 42 42 H 1.07988 * 120.11263 * 180.02562 * 23 22 21 43 43 H 1.09001 * 109.46922 * 180.02562 * 25 7 6 44 44 H 1.09000 * 109.47140 * 59.99976 * 25 7 6 45 45 H 1.08993 * 109.47839 * 60.00146 * 26 3 2 46 46 H 1.09000 * 109.47160 * 299.99708 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9719 -1.0235 0.0827 5 6 3.1178 0.6192 -1.3032 6 6 4.6477 0.6193 -1.3035 7 6 5.1579 1.4386 -0.1163 8 1 4.7945 2.4629 -0.1989 9 7 6.6228 1.4393 -0.1169 10 6 7.2961 2.3389 -0.8612 11 8 6.6891 3.1481 -1.5302 12 6 8.8032 2.3391 -0.8621 13 7 9.2907 3.4040 -1.7423 14 6 9.6434 3.2396 -3.0542 15 6 10.0456 4.4117 -3.5703 16 6 10.5142 4.6560 -4.9817 17 8 11.9348 4.8101 -4.9919 18 14 10.0389 3.2081 -6.0532 19 6 9.9415 5.4085 -2.5019 20 6 10.2083 6.7763 -2.4215 21 6 10.0009 7.4399 -1.2450 22 6 9.5274 6.7648 -0.1286 23 6 9.2575 5.4148 -0.1858 24 6 9.4565 4.7204 -1.3744 25 6 4.6482 0.8201 1.1869 26 6 3.1176 0.8203 1.1872 27 1 2.7540 1.6434 -1.3860 28 1 2.7547 0.0352 -2.1490 29 1 5.0109 1.0603 -2.2317 30 1 5.0112 -0.4050 -1.2209 31 1 7.1084 0.7922 0.4184 32 1 9.1671 2.5104 0.1508 33 1 9.1664 1.3760 -1.2208 34 1 9.6043 2.3052 -3.5943 35 1 10.0477 5.5623 -5.3676 36 1 12.4164 4.0397 -4.6606 37 1 10.4959 3.4365 -7.4475 38 1 10.6428 1.9610 -5.5191 39 1 10.5777 7.3080 -3.2858 40 1 10.2071 8.4983 -1.1834 41 1 9.3690 7.3030 0.7942 42 1 8.8890 4.8985 0.6881 43 1 5.0113 1.4041 2.0326 44 1 5.0116 -0.2042 1.2694 45 1 2.7545 0.3797 2.1156 46 1 2.7538 1.8445 1.1044 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:02:49 Heat of formation + Delta-G solvation = 22.144154 kcal Electronic energy + Delta-G solvation = -28920.636001 eV Core-core repulsion = 24970.109810 eV Total energy + Delta-G solvation = -3950.526191 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.50993 -41.19036 -39.69702 -38.04930 -37.66654 -37.24492 -35.32990 -34.08517 -32.15186 -31.79233 -30.88015 -30.13653 -28.78168 -25.89836 -24.54201 -24.10091 -23.57622 -22.55892 -21.70535 -21.42102 -20.58997 -18.91042 -18.70484 -18.48932 -17.82531 -17.43385 -16.96348 -16.51401 -16.32081 -16.11076 -15.91924 -15.62131 -15.46451 -15.28676 -14.99933 -14.79354 -14.66939 -14.55558 -14.39156 -14.01454 -13.97826 -13.82354 -13.62150 -13.56447 -13.35208 -13.10937 -12.61634 -12.53602 -12.46942 -12.43861 -12.40076 -12.29423 -11.89559 -11.76417 -11.64177 -11.54410 -11.10060 -10.43676 -10.36603 -10.28339 -9.03979 -8.54895 -4.88093 0.26191 0.78151 1.36227 1.37074 1.39755 1.60380 1.68499 1.74113 1.77464 2.01599 2.05732 2.79470 3.09861 3.32333 3.39884 3.45392 3.48174 3.57782 3.70934 3.72854 3.79160 3.84094 3.87437 3.91878 4.04626 4.06781 4.11237 4.16546 4.30247 4.35356 4.37923 4.50517 4.58384 4.71064 4.72613 4.75112 4.79736 4.82395 4.88186 4.89083 4.97980 5.00455 5.06936 5.24120 5.26064 5.63254 5.79355 5.84853 5.88646 6.12272 6.29043 6.34964 6.55512 6.58501 6.97449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.429 5.429 2 C 0.205 3.795 3 C 0.007 3.993 4 H 0.116 0.884 5 C -0.110 4.110 6 C -0.127 4.127 7 C 0.142 3.858 8 H 0.093 0.907 9 N -0.726 5.726 10 C 0.492 3.508 11 O -0.509 6.509 12 C 0.091 3.909 13 N -0.466 5.466 14 C 0.066 3.934 15 C -0.193 4.193 16 C -0.037 4.037 17 O -0.531 6.531 18 Si 0.682 3.318 19 C -0.086 4.086 20 C -0.065 4.065 21 C -0.146 4.146 22 C -0.096 4.096 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.124 4.124 26 C -0.109 4.109 27 H 0.076 0.924 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.071 0.929 31 H 0.402 0.598 32 H 0.117 0.883 33 H 0.122 0.878 34 H 0.168 0.832 35 H 0.114 0.886 36 H 0.372 0.628 37 H -0.256 1.256 38 H -0.260 1.260 39 H 0.123 0.877 40 H 0.123 0.877 41 H 0.125 0.875 42 H 0.114 0.886 43 H 0.078 0.922 44 H 0.076 0.924 45 H 0.081 0.919 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.045 -5.352 4.068 7.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.104 5.104 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.134 0.866 5 C -0.149 4.149 6 C -0.166 4.166 7 C 0.038 3.962 8 H 0.111 0.889 9 N -0.379 5.379 10 C 0.275 3.725 11 O -0.383 6.383 12 C -0.036 4.036 13 N -0.149 5.149 14 C -0.059 4.059 15 C -0.200 4.200 16 C -0.148 4.148 17 O -0.337 6.337 18 Si 0.584 3.416 19 C -0.091 4.091 20 C -0.083 4.083 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.149 4.149 24 C 0.005 3.995 25 C -0.162 4.162 26 C -0.148 4.148 27 H 0.095 0.905 28 H 0.097 0.903 29 H 0.096 0.904 30 H 0.090 0.910 31 H 0.236 0.764 32 H 0.135 0.865 33 H 0.140 0.860 34 H 0.185 0.815 35 H 0.132 0.868 36 H 0.220 0.780 37 H -0.181 1.181 38 H -0.185 1.185 39 H 0.141 0.859 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.132 0.868 43 H 0.097 0.903 44 H 0.095 0.905 45 H 0.099 0.901 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.900 -5.074 2.982 5.954 hybrid contribution 1.577 -0.567 0.933 1.918 sum 2.477 -5.641 3.916 7.300 Atomic orbital electron populations 1.81295 1.12970 1.08271 1.07883 1.29152 0.95058 0.93509 0.93617 1.18980 0.81430 1.03072 0.97919 0.86589 1.21533 0.95522 1.02330 0.95538 1.21911 0.94589 1.00868 0.99231 1.21085 0.78810 1.01367 0.94968 0.88913 1.46016 1.07351 1.35878 1.48649 1.20993 0.90143 0.81235 0.80080 1.90822 1.69458 1.37558 1.40447 1.21596 0.92124 0.92521 0.97311 1.43202 1.55912 1.06187 1.09587 1.21572 1.01352 0.99315 0.83653 1.20581 1.10865 0.92337 0.96231 1.24284 0.83186 1.11340 0.95958 1.86609 1.16769 1.43349 1.86951 0.95047 0.91976 0.75792 0.78820 1.18941 1.04030 0.93553 0.92531 1.20311 0.98016 0.92020 0.97981 1.20675 1.02654 1.00097 0.93063 1.20828 0.98825 0.93183 0.98716 1.19945 1.05426 0.94481 0.95006 1.18163 1.02225 0.83222 0.95892 1.21804 0.95257 1.02138 0.97045 1.21524 0.94991 1.01115 0.97191 0.90504 0.90290 0.90444 0.90987 0.76385 0.86498 0.86036 0.81466 0.86805 0.78041 1.18058 1.18524 0.85921 0.85937 0.85743 0.86754 0.90285 0.90509 0.90069 0.90423 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.72 18.54 42.15 0.78 -0.94 16 2 C 0.21 0.02 14.65 -20.76 -0.30 -0.29 16 3 C 0.01 -0.03 2.56 -93.41 -0.24 -0.27 16 4 H 0.12 -0.72 8.14 -51.93 -0.42 -1.14 16 5 C -0.11 0.43 5.16 -26.73 -0.14 0.29 16 6 C -0.13 0.54 5.50 -26.73 -0.15 0.39 16 7 C 0.14 -0.60 2.45 -67.93 -0.17 -0.76 16 8 H 0.09 -0.15 7.58 -51.93 -0.39 -0.55 16 9 N -0.73 3.56 5.08 -53.81 -0.27 3.28 16 10 C 0.49 -0.88 7.86 -10.98 -0.09 -0.97 16 11 O -0.51 -1.62 16.08 5.56 0.09 -1.53 16 12 C 0.09 -0.33 6.48 -5.19 -0.03 -0.36 16 13 N -0.47 -0.18 2.27 -115.71 -0.26 -0.44 16 14 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 15 C -0.19 -0.37 5.58 -102.71 -0.57 -0.94 16 16 C -0.04 -0.04 3.06 36.01 0.11 0.07 16 17 O -0.53 -1.20 12.88 -35.23 -0.45 -1.66 16 18 Si 0.68 -0.36 30.82 -169.99 -5.24 -5.60 16 19 C -0.09 -0.31 6.35 -105.13 -0.67 -0.98 16 20 C -0.06 -0.21 10.05 -39.65 -0.40 -0.61 16 21 C -0.15 -0.33 9.97 -39.95 -0.40 -0.73 16 22 C -0.10 -0.17 10.01 -39.54 -0.40 -0.56 16 23 C -0.13 -0.24 10.00 -39.43 -0.39 -0.64 16 24 C 0.11 0.30 6.80 -83.99 -0.57 -0.27 16 25 C -0.12 0.75 5.39 -26.70 -0.14 0.61 16 26 C -0.11 0.54 5.16 -26.70 -0.14 0.40 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.39 8.14 -51.93 -0.42 -0.82 16 31 H 0.40 -3.19 8.60 -40.82 -0.35 -3.54 16 32 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 33 H 0.12 -0.82 8.12 -51.93 -0.42 -1.24 16 34 H 0.17 -0.40 6.27 -52.48 -0.33 -0.73 16 35 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 36 H 0.37 -0.30 8.70 45.56 0.40 0.10 16 37 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 38 H -0.26 -0.07 7.00 56.52 0.40 0.33 16 39 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 40 H 0.12 0.05 8.06 -52.49 -0.42 -0.38 16 41 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 42 H 0.11 -0.02 8.06 -52.49 -0.42 -0.44 16 43 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 44 H 0.08 -0.57 8.14 -51.93 -0.42 -0.99 16 45 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 46 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 LS Contribution 387.56 15.07 5.84 5.84 Total: 0.00 -11.89 387.56 -11.00 -22.89 By element: Atomic # 1 Polarization: -9.45 SS G_CDS: -6.64 Total: -16.08 kcal Atomic # 6 Polarization: -0.91 SS G_CDS: -4.85 Total: -5.76 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: 0.25 Total: 1.90 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.36 Total: -3.19 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.24 Total: -5.60 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -11.89 -11.00 -22.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.037 kcal (2) G-P(sol) polarization free energy of solvation -11.890 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.893 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds