Wall clock time and date at job start Sun Mar 7 2021 06:02:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47090 * 355.38168 * 3 2 1 5 5 C 1.52997 * 109.47080 * 115.38144 * 3 2 1 6 6 C 1.52996 * 109.47165 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.46972 * 300.00293 * 6 5 3 8 8 H 1.09000 * 109.46986 * 299.99742 * 7 6 5 9 9 N 1.46496 * 109.47428 * 180.02562 * 7 6 5 10 10 C 1.34777 * 120.00336 * 84.99288 * 9 7 6 11 11 O 1.21280 * 119.99650 * 0.02562 * 10 9 7 12 12 C 1.50706 * 120.00082 * 180.02562 * 10 9 7 13 13 N 1.46503 * 109.46884 * 180.02562 * 12 10 9 14 14 C 1.36835 * 125.06032 * 265.02785 * 13 12 10 15 15 C 1.34233 * 109.93880 * 179.97438 * 14 13 12 16 16 C 1.50704 * 126.50283 * 180.02562 * 15 14 13 17 17 O 1.42901 * 109.46777 * 254.97084 * 16 15 14 18 18 Si 1.86297 * 109.46942 * 14.96951 * 16 15 14 19 19 C 1.46498 * 106.99987 * 359.97438 * 15 14 13 20 20 C 1.39588 * 134.03990 * 180.02562 * 19 15 14 21 21 C 1.36662 * 119.76082 * 179.97438 * 20 19 15 22 22 C 1.38790 * 120.53269 * 0.02562 * 21 20 19 23 23 C 1.37789 * 120.66626 * 359.97438 * 22 21 20 24 24 C 1.37685 * 125.06218 * 84.72020 * 13 12 10 25 25 C 1.52997 * 109.47415 * 59.99860 * 7 6 5 26 26 C 1.52999 * 109.46670 * 235.38417 * 3 2 1 27 27 H 1.09000 * 109.47140 * 60.00053 * 5 3 2 28 28 H 1.09001 * 109.47375 * 300.00036 * 5 3 2 29 29 H 1.08992 * 109.47534 * 180.02562 * 6 5 3 30 30 H 1.08996 * 109.47134 * 59.99508 * 6 5 3 31 31 H 0.97005 * 119.99981 * 264.99973 * 9 7 6 32 32 H 1.08990 * 109.47224 * 300.00188 * 12 10 9 33 33 H 1.08999 * 109.46660 * 60.00281 * 12 10 9 34 34 H 1.08004 * 125.03234 * 359.95712 * 14 13 12 35 35 H 1.08990 * 109.47063 * 134.97336 * 16 15 14 36 36 H 0.96703 * 113.99857 * 60.00011 * 17 16 15 37 37 H 1.48497 * 109.99784 * 180.02562 * 18 16 15 38 38 H 1.48501 * 110.00143 * 301.32028 * 18 16 15 39 39 H 1.07991 * 120.11871 * 359.94927 * 20 19 15 40 40 H 1.07999 * 119.73290 * 180.02562 * 21 20 19 41 41 H 1.07998 * 119.66309 * 179.97438 * 22 21 20 42 42 H 1.07988 * 120.11263 * 180.02562 * 23 22 21 43 43 H 1.09001 * 109.46922 * 180.02562 * 25 7 6 44 44 H 1.09000 * 109.47140 * 59.99976 * 25 7 6 45 45 H 1.08993 * 109.47839 * 60.00146 * 26 3 2 46 46 H 1.09000 * 109.47160 * 299.99708 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9719 -1.0235 0.0827 5 6 3.1178 0.6192 -1.3032 6 6 4.6477 0.6193 -1.3035 7 6 5.1579 1.4386 -0.1163 8 1 4.7945 2.4629 -0.1989 9 7 6.6228 1.4393 -0.1169 10 6 7.2961 2.3389 -0.8612 11 8 6.6891 3.1481 -1.5302 12 6 8.8032 2.3391 -0.8621 13 7 9.2907 3.4040 -1.7423 14 6 9.6434 3.2396 -3.0542 15 6 10.0456 4.4117 -3.5703 16 6 10.5142 4.6560 -4.9817 17 8 11.9348 4.8101 -4.9919 18 14 10.0389 3.2081 -6.0532 19 6 9.9415 5.4085 -2.5019 20 6 10.2083 6.7763 -2.4215 21 6 10.0009 7.4399 -1.2450 22 6 9.5274 6.7648 -0.1286 23 6 9.2575 5.4148 -0.1858 24 6 9.4565 4.7204 -1.3744 25 6 4.6482 0.8201 1.1869 26 6 3.1176 0.8203 1.1872 27 1 2.7540 1.6434 -1.3860 28 1 2.7547 0.0352 -2.1490 29 1 5.0109 1.0603 -2.2317 30 1 5.0112 -0.4050 -1.2209 31 1 7.1084 0.7922 0.4184 32 1 9.1671 2.5104 0.1508 33 1 9.1664 1.3760 -1.2208 34 1 9.6043 2.3052 -3.5943 35 1 10.0477 5.5623 -5.3676 36 1 12.4164 4.0397 -4.6606 37 1 10.4959 3.4365 -7.4475 38 1 10.6428 1.9610 -5.5191 39 1 10.5777 7.3080 -3.2858 40 1 10.2071 8.4983 -1.1834 41 1 9.3690 7.3030 0.7942 42 1 8.8890 4.8985 0.6881 43 1 5.0113 1.4041 2.0326 44 1 5.0116 -0.2042 1.2694 45 1 2.7545 0.3797 2.1156 46 1 2.7538 1.8445 1.1044 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16662488_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:02:48 Heat of formation + Delta-G solvation = 21.693093 kcal Electronic energy + Delta-G solvation = -28920.655560 eV Core-core repulsion = 24970.109810 eV Total energy + Delta-G solvation = -3950.545750 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.50027 -40.97348 -39.51482 -38.13150 -37.71908 -37.27768 -35.15898 -34.05074 -31.78443 -31.71866 -30.77235 -30.21043 -28.67662 -25.87595 -24.35917 -23.74603 -23.61983 -22.58934 -21.48006 -21.15339 -20.60074 -18.73356 -18.64658 -18.31884 -17.78046 -17.35956 -16.83866 -16.38885 -16.33158 -16.07080 -15.82963 -15.47768 -15.31996 -15.20294 -14.86513 -14.76625 -14.68708 -14.51726 -14.34326 -14.04440 -13.90748 -13.67539 -13.58550 -13.24556 -13.18455 -12.93529 -12.70331 -12.53971 -12.37613 -12.28256 -12.12999 -12.06173 -11.97665 -11.71333 -11.42200 -11.24024 -11.00317 -10.50930 -10.42869 -10.00980 -9.13168 -8.60105 -4.84499 0.16696 0.66553 1.37217 1.46034 1.58473 1.60025 1.72972 1.74416 1.78103 1.99765 2.28960 2.94320 2.98371 3.56118 3.66187 3.70278 3.72507 3.76825 3.81690 3.87931 4.05024 4.07549 4.21262 4.23561 4.24421 4.26547 4.33154 4.42498 4.45657 4.52588 4.55132 4.61003 4.73054 4.74414 4.81689 4.89679 4.91874 5.07831 5.15060 5.16277 5.20897 5.22547 5.37119 5.40760 5.53059 5.59402 5.68699 5.76001 5.77795 6.22787 6.27841 6.57820 6.60343 6.63031 7.28450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.505 5.505 2 C 0.235 3.765 3 C 0.013 3.987 4 H 0.151 0.849 5 C -0.108 4.108 6 C -0.119 4.119 7 C 0.142 3.858 8 H 0.060 0.940 9 N -0.706 5.706 10 C 0.492 3.508 11 O -0.568 6.568 12 C 0.085 3.915 13 N -0.465 5.465 14 C 0.077 3.923 15 C -0.217 4.217 16 C -0.052 4.052 17 O -0.554 6.554 18 Si 0.766 3.234 19 C -0.117 4.117 20 C -0.090 4.090 21 C -0.155 4.155 22 C -0.109 4.109 23 C -0.132 4.132 24 C 0.092 3.908 25 C -0.113 4.113 26 C -0.108 4.108 27 H 0.057 0.943 28 H 0.079 0.921 29 H 0.054 0.946 30 H 0.097 0.903 31 H 0.421 0.579 32 H 0.141 0.859 33 H 0.162 0.838 34 H 0.198 0.802 35 H 0.101 0.899 36 H 0.384 0.616 37 H -0.304 1.304 38 H -0.257 1.257 39 H 0.117 0.883 40 H 0.134 0.866 41 H 0.145 0.855 42 H 0.135 0.865 43 H 0.083 0.917 44 H 0.105 0.895 45 H 0.089 0.911 46 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.999 -8.300 5.728 10.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.182 5.182 2 C -0.082 4.082 3 C -0.008 4.008 4 H 0.169 0.831 5 C -0.147 4.147 6 C -0.157 4.157 7 C 0.037 3.963 8 H 0.078 0.922 9 N -0.360 5.360 10 C 0.277 3.723 11 O -0.446 6.446 12 C -0.039 4.039 13 N -0.147 5.147 14 C -0.049 4.049 15 C -0.225 4.225 16 C -0.160 4.160 17 O -0.362 6.362 18 Si 0.669 3.331 19 C -0.121 4.121 20 C -0.108 4.108 21 C -0.174 4.174 22 C -0.128 4.128 23 C -0.153 4.153 24 C -0.013 4.013 25 C -0.151 4.151 26 C -0.148 4.148 27 H 0.076 0.924 28 H 0.098 0.902 29 H 0.073 0.927 30 H 0.116 0.884 31 H 0.259 0.741 32 H 0.159 0.841 33 H 0.180 0.820 34 H 0.215 0.785 35 H 0.119 0.881 36 H 0.233 0.767 37 H -0.232 1.232 38 H -0.182 1.182 39 H 0.135 0.865 40 H 0.152 0.848 41 H 0.162 0.838 42 H 0.153 0.847 43 H 0.101 0.899 44 H 0.124 0.876 45 H 0.108 0.892 46 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 1.862 -8.063 4.720 9.526 hybrid contribution 1.302 0.391 0.417 1.422 sum 3.164 -7.671 5.137 9.760 Atomic orbital electron populations 1.81313 1.15421 1.10990 1.10437 1.29962 0.95772 0.91150 0.91322 1.19280 0.78496 1.05100 0.97893 0.83117 1.21489 0.96052 1.01318 0.95864 1.21822 0.93856 1.01965 0.98071 1.21028 0.79175 0.99891 0.96224 0.92189 1.45847 1.07099 1.35325 1.47691 1.21324 0.90899 0.80687 0.79393 1.90816 1.70646 1.39994 1.43109 1.22015 0.90663 0.93029 0.98199 1.43444 1.55081 1.06161 1.10002 1.22010 0.99410 0.99728 0.83750 1.20694 1.12629 0.92826 0.96321 1.24593 0.82584 1.12310 0.96529 1.86564 1.17709 1.44672 1.87224 0.94059 0.90616 0.73979 0.74443 1.19348 1.04698 0.94076 0.93987 1.20441 0.99360 0.92617 0.98399 1.20907 1.02590 1.00820 0.93083 1.21127 0.98790 0.93583 0.99271 1.20245 1.04831 0.94678 0.95518 1.18381 1.02486 0.84533 0.95881 1.21743 0.93947 1.03650 0.95728 1.21531 0.96005 1.00150 0.97071 0.92418 0.90224 0.92738 0.88425 0.74057 0.84088 0.82047 0.78498 0.88087 0.76739 1.23204 1.18185 0.86541 0.84784 0.83764 0.84747 0.89868 0.87622 0.89204 0.92012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -4.73 18.54 20.01 0.37 -4.36 16 2 C 0.23 0.08 14.65 89.44 1.31 1.39 16 3 C 0.01 -0.13 2.56 -12.60 -0.03 -0.17 16 4 H 0.15 -2.42 8.14 -2.39 -0.02 -2.44 16 5 C -0.11 0.88 5.16 30.59 0.16 1.03 16 6 C -0.12 1.16 5.50 30.59 0.17 1.32 16 7 C 0.14 -1.37 2.45 44.99 0.11 -1.26 16 8 H 0.06 -0.14 7.58 -2.39 -0.02 -0.16 16 9 N -0.71 8.57 5.08 -442.54 -2.25 6.33 16 10 C 0.49 -2.45 7.86 87.66 0.69 -1.76 16 11 O -0.57 -3.91 16.08 -3.03 -0.05 -3.95 16 12 C 0.09 -0.84 6.48 85.63 0.56 -0.28 16 13 N -0.46 0.09 2.27 -519.98 -1.18 -1.10 16 14 C 0.08 -0.02 9.89 83.00 0.82 0.81 16 15 C -0.22 -1.05 5.58 -18.62 -0.10 -1.15 16 16 C -0.05 -0.19 3.06 71.24 0.22 0.03 16 17 O -0.55 -3.45 12.88 -148.98 -1.92 -5.36 16 18 Si 0.77 -0.82 30.82 68.60 2.11 1.29 16 19 C -0.12 -1.06 6.35 -20.19 -0.13 -1.19 16 20 C -0.09 -0.83 10.05 22.23 0.22 -0.60 16 21 C -0.16 -0.98 9.97 22.03 0.22 -0.76 16 22 C -0.11 -0.46 10.01 22.30 0.22 -0.24 16 23 C -0.13 -0.53 10.00 22.37 0.22 -0.31 16 24 C 0.09 0.55 6.80 39.03 0.27 0.81 16 25 C -0.11 1.67 5.39 30.61 0.17 1.83 16 26 C -0.11 1.22 5.16 30.61 0.16 1.38 16 27 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 28 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 29 H 0.05 -0.23 8.14 -2.39 -0.02 -0.24 16 30 H 0.10 -1.41 8.14 -2.39 -0.02 -1.43 16 31 H 0.42 -8.33 8.60 -92.70 -0.80 -9.13 16 32 H 0.14 -2.04 8.14 -2.39 -0.02 -2.06 16 33 H 0.16 -2.89 8.12 -2.39 -0.02 -2.91 16 34 H 0.20 -1.43 6.27 -2.91 -0.02 -1.44 16 35 H 0.10 0.51 7.96 -2.39 -0.02 0.49 16 36 H 0.38 -0.23 8.70 -74.06 -0.64 -0.88 16 37 H -0.30 -2.11 7.11 99.48 0.71 -1.40 16 38 H -0.26 0.41 7.00 99.48 0.70 1.10 16 39 H 0.12 1.00 8.06 -2.92 -0.02 0.98 16 40 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 41 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 42 H 0.13 -0.16 8.06 -2.92 -0.02 -0.19 16 43 H 0.08 -1.21 8.14 -2.39 -0.02 -1.23 16 44 H 0.11 -2.08 8.14 -2.39 -0.02 -2.10 16 45 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 46 H 0.06 -0.48 8.14 -2.39 -0.02 -0.50 16 Total: 0.00 -33.61 387.56 1.93 -31.68 By element: Atomic # 1 Polarization: -25.00 SS G_CDS: -0.40 Total: -25.41 kcal Atomic # 6 Polarization: -4.36 SS G_CDS: 5.24 Total: 0.88 kcal Atomic # 7 Polarization: 3.93 SS G_CDS: -3.06 Total: 0.87 kcal Atomic # 8 Polarization: -7.35 SS G_CDS: -1.97 Total: -9.32 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.11 Total: 1.29 kcal Total: -33.61 1.93 -31.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.374 kcal (2) G-P(sol) polarization free energy of solvation -33.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.681 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds