Wall clock time and date at job start Sun Mar 7 2021 06:33:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36541 * 126.64918 * 2 1 4 4 C 1.46653 * 125.98363 * 0.02562 * 3 2 1 5 5 O 1.21700 * 120.00537 * 359.97438 * 4 3 2 6 6 N 1.34775 * 120.00289 * 179.97438 * 4 3 2 7 7 C 1.46498 * 120.00476 * 180.02562 * 6 4 3 8 8 H 1.08991 * 112.85023 * 23.80013 * 7 6 4 9 9 C 1.53785 * 113.61694 * 155.00087 * 7 6 4 10 10 C 1.53776 * 87.08103 * 139.97655 * 9 7 6 11 11 H 1.09007 * 113.61302 * 89.12072 * 10 9 7 12 12 C 1.53004 * 113.61463 * 219.93177 * 10 9 7 13 13 C 1.47202 * 109.47036 * 185.00725 * 12 10 9 14 14 N 9.93331 * 100.72929 * 342.97043 * 2 1 3 15 15 C 1.53774 * 87.08299 * 334.56910 * 10 9 7 16 16 O 1.34912 * 108.02619 * 180.02562 * 3 2 1 17 17 C 1.33925 * 109.38592 * 359.97438 * 16 3 2 18 18 C 1.50703 * 125.61743 * 179.97438 * 17 16 3 19 19 O 1.42904 * 109.47020 * 270.02521 * 18 17 16 20 20 C 1.35895 * 116.99866 * 179.97438 * 19 18 17 21 21 C 1.38735 * 120.05190 * 180.02562 * 20 19 18 22 22 C 1.38147 * 119.94129 * 179.97438 * 21 20 19 23 23 C 1.38267 * 120.05789 * 359.97438 * 22 21 20 24 24 C 1.50699 * 119.94534 * 179.97438 * 23 22 21 25 25 O 1.42895 * 109.47158 * 299.99634 * 24 23 22 26 26 Si 1.86300 * 109.46944 * 180.02562 * 24 23 22 27 27 C 1.38271 * 120.10847 * 0.27231 * 23 22 21 28 28 C 1.38146 * 120.05540 * 359.45178 * 27 23 22 29 29 C 1.35132 * 108.76605 * 0.24637 * 17 16 3 30 30 H 1.08996 * 109.47052 * 89.99858 * 1 2 3 31 31 H 1.08996 * 109.46982 * 209.99689 * 1 2 3 32 32 H 1.08994 * 109.46681 * 329.99725 * 1 2 3 33 33 H 0.97001 * 119.99527 * 359.97438 * 6 4 3 34 34 H 1.08998 * 113.61625 * 254.53352 * 9 7 6 35 35 H 1.09002 * 113.61121 * 25.42810 * 9 7 6 36 36 H 1.09003 * 109.46762 * 305.00371 * 12 10 9 37 37 H 1.08999 * 109.47067 * 65.00417 * 12 10 9 38 38 H 1.09005 * 113.61095 * 270.87632 * 15 10 9 39 39 H 1.09001 * 113.61426 * 139.98833 * 15 10 9 40 40 H 1.08994 * 109.47190 * 150.03207 * 18 17 16 41 41 H 1.08999 * 109.46790 * 30.02264 * 18 17 16 42 42 H 1.07993 * 120.03328 * 359.95220 * 21 20 19 43 43 H 1.07996 * 119.97399 * 179.97438 * 22 21 20 44 44 H 1.09000 * 109.47247 * 60.00087 * 24 23 22 45 45 H 0.96698 * 114.00355 * 300.00487 * 25 24 23 46 46 H 1.48506 * 110.00048 * 180.02562 * 26 24 23 47 47 H 1.48502 * 109.99996 * 301.31619 * 26 24 23 48 48 H 1.08003 * 119.96738 * 179.72707 * 27 23 22 49 49 H 1.08003 * 120.02766 * 180.26922 * 28 27 23 50 50 H 1.08002 * 126.43902 * 179.72029 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3221 1.0955 0.0000 4 6 1.8843 2.4951 0.0005 5 8 0.6968 2.7614 0.0006 6 7 2.7971 3.4867 0.0010 7 6 2.3599 4.8850 0.0021 8 1 1.3566 5.0143 0.4078 9 6 3.3950 5.8537 0.5980 10 6 3.0112 6.8307 -0.5258 11 1 2.1856 7.4931 -0.2654 12 6 4.2056 7.5769 -1.1237 13 6 3.7259 8.5684 -2.1002 14 7 3.3563 9.3317 -2.8583 15 6 2.5802 5.6003 -1.3412 16 8 3.6005 0.6646 -0.0006 17 6 3.6184 -0.6745 -0.0004 18 6 4.8551 -1.5357 -0.0014 19 8 5.2450 -1.8077 -1.3491 20 6 6.3507 -2.5771 -1.5280 21 6 6.7863 -2.8801 -2.8099 22 6 7.9109 -3.6621 -2.9892 23 6 8.6026 -4.1422 -1.8925 24 6 9.8288 -4.9955 -2.0910 25 8 9.4769 -6.1728 -2.8205 26 14 10.5243 -5.4787 -0.4316 27 6 8.1676 -3.8458 -0.6139 28 6 7.0468 -3.0596 -0.4293 29 6 2.3448 -1.1262 -0.0052 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3633 -0.8900 0.5138 32 1 -0.3632 0.8899 0.5139 33 1 3.7436 3.2746 0.0013 34 1 3.1357 6.2108 1.5946 35 1 4.4210 5.4919 0.5305 36 1 4.7516 8.0848 -0.3286 37 1 4.8657 6.8666 -1.6214 38 1 3.3834 5.1694 -1.9389 39 1 1.6631 5.7530 -1.9103 40 1 4.6449 -2.4738 0.5123 41 1 5.6622 -1.0131 0.5119 42 1 6.2464 -2.5054 -3.6669 43 1 8.2502 -3.8986 -3.9868 44 1 10.5769 -4.4324 -2.6489 45 1 8.8138 -6.7236 -2.3822 46 1 11.7345 -6.3200 -0.6136 47 1 10.8647 -4.2628 0.3500 48 1 8.7071 -4.2257 0.2411 49 1 6.7099 -2.8248 0.5697 50 1 2.0307 -2.1595 -0.0105 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:26 Heat of formation + Delta-G solvation = -7.759779 kcal Electronic energy + Delta-G solvation = -33050.473000 eV Core-core repulsion = 28398.485463 eV Total energy + Delta-G solvation = -4651.987536 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.161 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.91897 -41.40861 -41.24422 -39.65001 -39.28603 -37.39688 -37.24749 -35.51351 -34.66516 -33.26313 -32.15618 -31.64590 -31.27083 -28.88638 -28.29349 -26.93841 -26.29162 -24.87975 -24.00532 -22.77837 -22.37464 -22.23355 -21.31284 -20.54935 -19.57789 -19.18535 -18.80211 -18.38888 -17.50865 -17.42742 -17.35774 -17.00829 -16.72555 -16.56308 -16.16929 -16.04750 -15.83398 -15.72832 -15.41123 -15.27045 -14.90233 -14.76071 -14.47843 -14.34515 -14.23941 -14.05053 -13.94083 -13.81323 -13.71886 -13.69200 -13.63327 -13.57358 -13.42455 -13.05530 -12.81833 -12.71942 -12.29738 -12.24844 -12.20135 -12.10541 -11.82822 -11.78764 -11.53619 -11.15463 -10.78590 -10.47706 -10.26023 -10.12683 -9.68112 -9.30459 -5.09969 -0.21338 0.20636 0.22122 0.96956 1.24810 1.35410 1.56636 1.75966 1.83106 1.92436 1.99923 2.05242 2.29586 2.58246 2.86854 3.20759 3.24970 3.39457 3.42272 3.55978 3.57807 3.61259 3.63803 3.65333 3.69521 3.79957 3.85258 3.90274 4.07089 4.19475 4.21103 4.29702 4.35938 4.37956 4.44099 4.44887 4.48024 4.55805 4.58121 4.58642 4.66593 4.77678 4.80312 4.86821 4.86972 4.96115 5.01571 5.07050 5.11451 5.16793 5.30895 5.42571 5.42799 5.60271 5.70050 6.18029 6.32144 6.53715 6.61213 6.96563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.082 4.082 3 C -0.076 4.076 4 C 0.607 3.393 5 O -0.511 6.511 6 N -0.711 5.711 7 C 0.122 3.878 8 H 0.122 0.878 9 C -0.137 4.137 10 C -0.106 4.106 11 H 0.105 0.895 12 C -0.014 4.014 13 C 0.202 3.798 14 N -0.433 5.433 15 C -0.151 4.151 16 O -0.156 6.156 17 C 0.011 3.989 18 C 0.139 3.861 19 O -0.308 6.308 20 C 0.135 3.865 21 C -0.147 4.147 22 C -0.051 4.051 23 C -0.156 4.156 24 C -0.064 4.064 25 O -0.541 6.541 26 Si 0.686 3.314 27 C -0.075 4.075 28 C -0.204 4.204 29 C -0.182 4.182 30 H 0.077 0.923 31 H 0.071 0.929 32 H 0.088 0.912 33 H 0.407 0.593 34 H 0.084 0.916 35 H 0.094 0.906 36 H 0.114 0.886 37 H 0.110 0.890 38 H 0.091 0.909 39 H 0.077 0.923 40 H 0.103 0.897 41 H 0.086 0.914 42 H 0.134 0.866 43 H 0.135 0.865 44 H 0.113 0.887 45 H 0.379 0.621 46 H -0.255 1.255 47 H -0.259 1.259 48 H 0.130 0.870 49 H 0.133 0.867 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.525 -4.510 6.139 8.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.085 4.085 3 C -0.128 4.128 4 C 0.394 3.606 5 O -0.388 6.388 6 N -0.361 5.361 7 C 0.017 3.983 8 H 0.139 0.861 9 C -0.175 4.175 10 C -0.126 4.126 11 H 0.123 0.877 12 C -0.054 4.054 13 C -0.116 4.116 14 N -0.110 5.110 15 C -0.190 4.190 16 O -0.052 6.052 17 C -0.041 4.041 18 C 0.065 3.935 19 O -0.222 6.222 20 C 0.090 3.910 21 C -0.165 4.165 22 C -0.069 4.069 23 C -0.156 4.156 24 C -0.175 4.175 25 O -0.346 6.346 26 Si 0.589 3.411 27 C -0.093 4.093 28 C -0.223 4.223 29 C -0.202 4.202 30 H 0.096 0.904 31 H 0.090 0.910 32 H 0.107 0.893 33 H 0.242 0.758 34 H 0.103 0.897 35 H 0.113 0.887 36 H 0.132 0.868 37 H 0.128 0.872 38 H 0.110 0.890 39 H 0.096 0.904 40 H 0.121 0.879 41 H 0.104 0.896 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.130 0.870 45 H 0.226 0.774 46 H -0.180 1.180 47 H -0.184 1.184 48 H 0.147 0.853 49 H 0.151 0.849 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.371 -2.582 4.993 6.101 hybrid contribution 0.627 -0.106 -0.040 0.637 sum 2.998 -2.688 4.954 6.384 Atomic orbital electron populations 1.20481 0.87663 1.03971 1.03312 1.20698 0.97956 0.90707 0.99171 1.21870 0.81170 0.94870 1.14876 1.16513 0.85826 0.81772 0.76518 1.90885 1.15630 1.82184 1.50134 1.45872 1.09834 1.05800 1.74578 1.22587 1.00213 0.78271 0.97214 0.86054 1.23419 0.99838 0.95251 0.99013 1.22343 0.97801 0.95410 0.97054 0.87709 1.19297 0.98067 0.93624 0.94462 1.29240 0.93919 0.94197 0.94257 1.81359 1.08488 1.10750 1.10391 1.23650 1.03008 0.95226 0.97120 1.83962 1.28502 1.21780 1.70987 1.21901 0.95945 0.80629 1.05609 1.20948 0.92045 0.97163 0.83366 1.86155 1.42067 1.66235 1.27751 1.18983 0.86297 0.91424 0.94333 1.20530 0.98716 1.02320 0.94948 1.20859 0.93025 0.93889 0.99162 1.20270 0.99379 1.02560 0.93430 1.24977 0.97307 0.87399 1.07782 1.86503 1.63837 1.34540 1.49745 0.94809 0.84441 0.83980 0.77897 1.20806 0.95516 0.96784 0.96190 1.21189 0.98926 1.04021 0.98168 1.21618 0.91135 1.00651 1.06758 0.90416 0.91042 0.89312 0.75804 0.89704 0.88728 0.86798 0.87182 0.89004 0.90380 0.87944 0.89586 0.84777 0.84763 0.86955 0.77365 1.17971 1.18366 0.85261 0.84917 0.82053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.07 9.82 36.01 0.35 0.28 16 2 C -0.08 -0.12 6.20 -104.43 -0.65 -0.77 16 3 C -0.08 -0.13 7.13 -36.80 -0.26 -0.39 16 4 C 0.61 1.09 7.79 -12.87 -0.10 0.99 16 5 O -0.51 -2.28 14.34 5.19 0.07 -2.21 16 6 N -0.71 0.99 5.35 -54.33 -0.29 0.70 16 7 C 0.12 -0.29 4.24 -67.12 -0.28 -0.58 16 8 H 0.12 -0.11 7.46 -51.93 -0.39 -0.50 16 9 C -0.14 0.70 7.39 -25.92 -0.19 0.51 16 10 C -0.11 0.47 3.61 -89.81 -0.32 0.15 16 11 H 0.10 -0.41 8.12 -51.93 -0.42 -0.83 16 12 C -0.01 0.07 5.54 -29.52 -0.16 -0.09 16 13 C 0.20 0.02 15.42 -20.71 -0.32 -0.30 16 14 N -0.43 -1.88 18.55 42.21 0.78 -1.09 16 15 C -0.15 0.43 7.43 -25.92 -0.19 0.24 16 16 O -0.16 -0.13 10.40 5.02 0.05 -0.08 16 17 C 0.01 0.00 6.94 -35.41 -0.25 -0.25 16 18 C 0.14 -0.31 5.27 36.01 0.19 -0.12 16 19 O -0.31 -0.11 10.12 -19.41 -0.20 -0.30 16 20 C 0.13 0.00 6.69 -39.22 -0.26 -0.26 16 21 C -0.15 -0.02 9.99 -39.43 -0.39 -0.42 16 22 C -0.05 0.01 9.60 -39.60 -0.38 -0.37 16 23 C -0.16 0.11 5.39 -104.60 -0.56 -0.45 16 24 C -0.06 0.06 2.82 36.01 0.10 0.16 16 25 O -0.54 0.21 12.76 -35.23 -0.45 -0.24 16 26 Si 0.69 -1.22 29.78 -169.99 -5.06 -6.28 16 27 C -0.08 0.12 8.66 -39.60 -0.34 -0.23 16 28 C -0.20 0.32 9.04 -39.43 -0.36 -0.04 16 29 C -0.18 0.00 10.73 -39.89 -0.43 -0.43 16 30 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.09 0.18 6.44 -51.93 -0.33 -0.16 16 33 H 0.41 -1.34 8.48 -40.82 -0.35 -1.68 16 34 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 35 H 0.09 -0.61 8.08 -51.93 -0.42 -1.03 16 36 H 0.11 -0.78 8.14 -51.93 -0.42 -1.20 16 37 H 0.11 -0.71 7.85 -51.93 -0.41 -1.12 16 38 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 41 H 0.09 -0.32 7.66 -51.93 -0.40 -0.71 16 42 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 43 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.11 -0.05 7.96 -51.93 -0.41 -0.46 16 45 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 46 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 47 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 48 H 0.13 -0.44 4.87 -52.48 -0.26 -0.69 16 49 H 0.13 -0.53 6.30 -52.48 -0.33 -0.86 16 50 H 0.16 -0.35 8.06 -52.49 -0.42 -0.77 16 LS Contribution 427.58 15.07 6.44 6.44 Total: 0.00 -11.10 427.58 -10.17 -21.26 By element: Atomic # 1 Polarization: -9.11 SS G_CDS: -6.71 Total: -15.82 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -4.81 Total: -2.38 kcal Atomic # 7 Polarization: -0.89 SS G_CDS: 0.49 Total: -0.40 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -0.52 Total: -2.83 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.06 Total: -6.28 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -11.10 -10.17 -21.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.504 kcal (2) G-P(sol) polarization free energy of solvation -11.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds