Wall clock time and date at job start Sun Mar 7 2021 06:33:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35998 * 116.99870 * 2 1 4 4 C 1.39158 * 120.06828 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07367 * 359.97438 * 4 3 2 6 6 C 1.42903 * 116.99587 * 179.72863 * 5 4 3 7 7 C 1.50701 * 109.46878 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99781 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99795 * 179.97438 * 7 6 5 10 10 C 1.46497 * 119.99566 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85056 * 25.34023 * 10 9 7 12 12 C 1.53784 * 113.61126 * 156.53132 * 10 9 7 13 13 C 1.53786 * 87.07801 * 139.98073 * 12 10 9 14 14 H 1.09004 * 113.61331 * 89.12262 * 13 12 10 15 15 C 1.53003 * 113.61179 * 219.93463 * 13 12 10 16 16 C 1.47204 * 109.46693 * 185.00321 * 15 13 12 17 17 N 9.79078 * 140.57452 * 332.15242 * 5 1 2 18 18 C 1.53787 * 113.61653 * 254.13757 * 10 9 7 19 19 C 1.38562 * 119.85085 * 179.72762 * 4 3 2 20 20 C 1.38251 * 120.00023 * 0.27042 * 19 4 3 21 21 N 1.48005 * 119.92581 * 180.02562 * 20 19 4 22 22 O 1.21796 * 120.00416 * 359.97438 * 21 20 19 23 23 O 1.21798 * 119.99717 * 180.02562 * 21 20 19 24 24 C 1.38250 * 120.14258 * 359.97438 * 20 19 4 25 25 C 1.50701 * 119.92404 * 180.02562 * 24 20 19 26 26 O 1.42900 * 109.47213 * 74.99909 * 25 24 20 27 27 Si 1.86295 * 109.47211 * 195.00131 * 25 24 20 28 28 C 1.38234 * 120.15167 * 0.02562 * 24 20 19 29 29 H 1.09001 * 109.47399 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46964 * 299.99907 * 1 2 3 31 31 H 1.08998 * 109.47234 * 59.99942 * 1 2 3 32 32 H 1.09002 * 109.47382 * 60.00075 * 6 5 4 33 33 H 1.09001 * 109.46938 * 300.00061 * 6 5 4 34 34 H 0.96995 * 120.00011 * 0.02562 * 9 7 6 35 35 H 1.08998 * 113.61799 * 254.52676 * 12 10 9 36 36 H 1.09002 * 113.61278 * 25.35275 * 12 10 9 37 37 H 1.09004 * 109.47385 * 304.99895 * 15 13 12 38 38 H 1.08994 * 109.47258 * 65.00296 * 15 13 12 39 39 H 1.08995 * 113.61076 * 334.57310 * 18 10 9 40 40 H 1.08995 * 113.61025 * 105.47189 * 18 10 9 41 41 H 1.07999 * 120.00493 * 180.25096 * 19 4 3 42 42 H 1.09005 * 109.47345 * 315.00241 * 25 24 20 43 43 H 0.96705 * 113.99964 * 60.00028 * 26 25 24 44 44 H 1.48497 * 110.00355 * 58.68233 * 27 25 24 45 45 H 1.48506 * 110.00231 * 180.02562 * 27 25 24 46 46 H 1.08001 * 120.00702 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0071 7 6 6.2519 -1.0583 -0.0068 8 8 5.5669 -2.0592 -0.0018 9 7 7.5957 -1.1613 -0.0129 10 6 8.2290 -2.4823 -0.0131 11 1 7.5913 -3.2573 -0.4383 12 6 9.6581 -2.4801 -0.5811 13 6 10.0214 -3.4665 0.5414 14 1 9.8742 -4.5116 0.2689 15 6 11.3919 -3.2034 1.1687 16 6 11.6977 -4.2644 2.1422 17 7 11.9317 -5.0693 2.9231 18 6 8.8491 -2.8684 1.3402 19 6 4.0603 2.5233 -0.0062 20 6 3.3030 3.6798 -0.0057 21 7 3.9716 5.0003 -0.0124 22 8 5.1877 5.0671 -0.0179 23 8 3.3056 6.0200 -0.0115 24 6 1.9225 3.6057 -0.0001 25 6 1.1017 4.8696 -0.0001 26 8 1.1296 5.4556 -1.3032 27 14 -0.6576 4.4676 0.4625 28 6 1.2933 2.3748 0.0056 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 5.9104 0.8529 0.8799 33 1 5.9026 0.8479 -0.9000 34 1 8.1434 -0.3608 -0.0172 35 1 9.7316 -2.9095 -1.5803 36 1 10.1601 -1.5163 -0.4966 37 1 12.1532 -3.1958 0.3885 38 1 11.3806 -2.2382 1.6748 39 1 9.1299 -2.0113 1.9522 40 1 8.2702 -3.6107 1.8897 41 1 5.1386 2.5840 -0.0108 42 1 1.5161 5.5720 0.7230 43 1 0.7749 4.8850 -1.9987 44 1 -0.6971 3.8285 1.8023 45 1 -1.4776 5.7057 0.4655 46 1 0.2147 2.3196 0.0096 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_4549636.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:34 Heat of formation + Delta-G solvation = -43.309927 kcal Electronic energy + Delta-G solvation = -34028.101005 eV Core-core repulsion = 29083.771504 eV Total energy + Delta-G solvation = -4944.329502 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.25970 -42.15040 -41.45081 -40.32521 -39.43573 -39.13123 -37.58396 -37.25575 -37.08821 -34.99166 -32.73947 -32.62682 -31.57066 -29.80185 -28.99032 -27.88709 -26.99499 -25.91998 -24.69677 -23.72792 -23.17329 -21.87946 -20.98056 -20.74538 -19.71302 -19.58482 -18.96653 -18.74941 -18.50551 -18.30827 -17.85823 -17.74057 -17.49302 -17.07995 -17.03783 -16.56436 -16.49570 -16.15243 -15.95451 -15.77367 -15.33567 -15.23863 -14.99334 -14.52284 -14.42370 -14.12614 -14.00467 -13.96001 -13.74471 -13.58624 -13.53509 -13.16736 -13.06725 -12.79163 -12.71906 -12.59715 -12.54626 -12.32771 -12.29946 -12.21922 -11.96423 -11.87113 -11.69104 -11.57797 -11.03002 -10.60297 -10.55215 -10.28074 -9.55936 -5.28962 -1.24812 -0.53445 0.29816 0.41011 1.01331 1.10517 1.31989 1.42856 1.69215 1.71119 1.75382 1.81310 1.84250 2.21247 2.82184 2.88306 3.05502 3.15405 3.19075 3.30742 3.33809 3.40233 3.43378 3.52580 3.59546 3.61576 3.68722 3.77666 3.83262 3.92671 3.95084 4.02315 4.14046 4.16979 4.22810 4.34344 4.36669 4.42024 4.52060 4.52542 4.57603 4.64499 4.74763 4.82287 4.99335 5.27902 5.42184 5.45471 5.89527 6.18866 6.42185 6.57965 6.76203 6.94261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.265 6.265 6 C 0.030 3.970 7 C 0.519 3.481 8 O -0.507 6.507 9 N -0.717 5.717 10 C 0.124 3.876 11 H 0.119 0.881 12 C -0.136 4.136 13 C -0.106 4.106 14 H 0.104 0.896 15 C -0.012 4.012 16 C 0.199 3.801 17 N -0.433 5.433 18 C -0.152 4.152 19 C -0.118 4.118 20 C -0.025 4.025 21 N 0.032 4.968 22 O -0.173 6.173 23 O -0.130 6.130 24 C -0.043 4.043 25 C -0.074 4.074 26 O -0.515 6.515 27 Si 0.674 3.326 28 C -0.177 4.177 29 H 0.114 0.886 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.100 0.900 33 H 0.101 0.899 34 H 0.404 0.596 35 H 0.084 0.916 36 H 0.095 0.905 37 H 0.114 0.886 38 H 0.111 0.889 39 H 0.092 0.908 40 H 0.077 0.923 41 H 0.166 0.834 42 H 0.139 0.861 43 H 0.374 0.626 44 H -0.252 1.252 45 H -0.242 1.242 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.674 -0.184 -4.427 4.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.303 3.697 8 O -0.380 6.380 9 N -0.370 5.370 10 C 0.020 3.980 11 H 0.137 0.863 12 C -0.175 4.175 13 C -0.127 4.127 14 H 0.123 0.877 15 C -0.052 4.052 16 C -0.118 4.118 17 N -0.110 5.110 18 C -0.191 4.191 19 C -0.138 4.138 20 C -0.109 4.109 21 N 0.551 4.449 22 O -0.384 6.384 23 O -0.350 6.350 24 C -0.045 4.045 25 C -0.184 4.184 26 O -0.319 6.319 27 Si 0.574 3.426 28 C -0.196 4.196 29 H 0.132 0.868 30 H 0.083 0.917 31 H 0.087 0.913 32 H 0.117 0.883 33 H 0.118 0.882 34 H 0.239 0.761 35 H 0.103 0.897 36 H 0.114 0.886 37 H 0.132 0.868 38 H 0.129 0.871 39 H 0.110 0.890 40 H 0.095 0.905 41 H 0.184 0.816 42 H 0.156 0.844 43 H 0.220 0.780 44 H -0.176 1.176 45 H -0.166 1.166 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.509 -2.566 -2.343 4.286 hybrid contribution 1.014 1.483 -0.036 1.797 sum -1.495 -1.083 -2.379 3.011 Atomic orbital electron populations 1.23421 0.76789 1.05791 1.02177 1.86347 1.22498 1.24212 1.86486 1.18454 0.89053 0.85899 0.94373 1.17848 0.88417 0.85332 1.02221 1.86340 1.16859 1.26013 1.88424 1.22683 0.80249 0.97286 1.04618 1.19886 0.82779 0.90120 0.76896 1.90812 1.62617 1.37853 1.46763 1.45786 1.05679 1.09593 1.75931 1.22551 0.93005 0.85264 0.97200 0.86292 1.23413 0.94682 1.00236 0.99123 1.22375 0.92516 1.00785 0.96974 0.87733 1.19289 0.98400 0.93117 0.94430 1.29593 0.93453 0.94625 0.94176 1.81705 1.08555 1.10862 1.09890 1.23682 0.96721 1.01522 0.97131 1.20800 1.02190 0.88958 1.01830 1.20400 0.91979 0.83146 1.15409 1.43378 1.00980 1.02620 0.97915 1.94537 0.95806 1.93719 1.54355 1.94578 1.64446 1.24071 1.51894 1.20097 0.91613 0.97053 0.95716 1.25467 1.08460 0.93293 0.91194 1.86714 1.86508 1.43425 1.15237 0.95575 0.76383 0.85273 0.85368 1.20901 1.00515 0.89600 1.08545 0.86768 0.91743 0.91348 0.88255 0.88161 0.76057 0.89712 0.88627 0.86759 0.87126 0.88994 0.90459 0.81623 0.84401 0.77975 1.17643 1.16577 0.82022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.28 0.05 10.28 -34.24 -0.35 -0.30 16 3 C 0.17 -0.09 6.70 -39.12 -0.26 -0.35 16 4 C 0.11 0.00 6.70 -39.12 -0.26 -0.27 16 5 O -0.26 -0.26 9.45 -47.35 -0.45 -0.71 16 6 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 7 C 0.52 -0.30 7.91 -10.98 -0.09 -0.38 16 8 O -0.51 -2.33 16.12 -14.35 -0.23 -2.56 16 9 N -0.72 2.89 5.36 -53.01 -0.28 2.60 16 10 C 0.12 -0.45 4.21 -67.11 -0.28 -0.74 16 11 H 0.12 -0.18 7.50 -51.93 -0.39 -0.57 16 12 C -0.14 0.85 7.39 -25.91 -0.19 0.66 16 13 C -0.11 0.56 3.61 -89.72 -0.32 0.23 16 14 H 0.10 -0.47 8.12 -51.93 -0.42 -0.89 16 15 C -0.01 0.07 5.54 -29.52 -0.16 -0.09 16 16 C 0.20 -0.09 15.45 -20.44 -0.32 -0.40 16 17 N -0.43 -1.72 18.60 42.54 0.79 -0.92 16 18 C -0.15 0.59 7.45 -25.83 -0.19 0.39 16 19 C -0.12 0.07 8.54 -39.46 -0.34 -0.26 16 20 C -0.03 -0.03 6.85 -79.94 -0.55 -0.58 16 21 N 0.03 0.12 4.45 33.96 0.15 0.27 16 22 O -0.17 -0.76 18.44 -29.46 -0.54 -1.30 16 23 O -0.13 -0.66 14.62 -35.96 -0.53 -1.19 16 24 C -0.04 0.02 5.26 -104.62 -0.55 -0.53 16 25 C -0.07 0.03 1.74 36.01 0.06 0.09 16 26 O -0.52 -0.04 11.80 -55.47 -0.65 -0.70 16 27 Si 0.67 -1.62 29.91 -169.99 -5.08 -6.70 16 28 C -0.18 0.40 7.64 -39.46 -0.30 0.10 16 29 H 0.11 -0.61 8.14 -51.93 -0.42 -1.04 16 30 H 0.06 -0.36 7.65 -51.93 -0.40 -0.76 16 31 H 0.07 -0.44 7.67 -51.93 -0.40 -0.84 16 32 H 0.10 -0.51 7.66 -51.93 -0.40 -0.91 16 33 H 0.10 -0.53 7.66 -51.93 -0.40 -0.93 16 34 H 0.40 -2.96 8.71 -40.82 -0.36 -3.31 16 35 H 0.08 -0.52 8.14 -51.93 -0.42 -0.94 16 36 H 0.10 -0.76 8.07 -51.93 -0.42 -1.18 16 37 H 0.11 -0.86 8.14 -51.93 -0.42 -1.28 16 38 H 0.11 -0.82 7.86 -51.93 -0.41 -1.23 16 39 H 0.09 -0.44 7.91 -51.93 -0.41 -0.85 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 41 H 0.17 -0.45 5.85 -52.49 -0.31 -0.76 16 42 H 0.14 0.19 6.07 -51.93 -0.32 -0.13 16 43 H 0.37 -1.67 8.70 45.56 0.40 -1.28 16 44 H -0.25 0.09 7.11 56.52 0.40 0.49 16 45 H -0.24 -0.24 7.11 56.52 0.40 0.16 16 46 H 0.16 -0.85 3.36 -52.49 -0.18 -1.03 16 LS Contribution 398.64 15.07 6.01 6.01 Total: 0.00 -15.39 398.64 -9.03 -24.42 By element: Atomic # 1 Polarization: -12.56 SS G_CDS: -5.29 Total: -17.84 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -2.57 Total: -1.08 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: 0.66 Total: 1.95 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -2.75 Total: -6.76 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.08 Total: -6.70 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -15.39 -9.03 -24.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_4549636.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.890 kcal (2) G-P(sol) polarization free energy of solvation -15.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.420 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds