Wall clock time and date at job start Sun Mar 7 2021 06:33:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.52994 * 109.47301 * 73.74423 * 3 2 1 5 5 H 1.09005 * 112.90786 * 316.24453 * 4 3 2 6 6 C 1.53783 * 113.61773 * 184.99935 * 4 3 2 7 7 C 1.53777 * 87.08238 * 220.01671 * 6 4 3 8 8 H 1.08999 * 113.61220 * 270.79875 * 7 6 4 9 9 N 1.46497 * 113.61565 * 139.97844 * 7 6 4 10 10 C 1.34781 * 120.00443 * 154.99988 * 9 7 6 11 11 O 1.21279 * 119.99661 * 0.02562 * 10 9 7 12 12 C 1.50693 * 120.00293 * 180.02562 * 10 9 7 13 13 O 1.42897 * 109.47111 * 180.02562 * 12 10 9 14 14 C 1.35906 * 116.99988 * 180.02562 * 13 12 10 15 15 C 1.38705 * 120.05367 * 359.97438 * 14 13 12 16 16 C 1.38172 * 119.94206 * 180.02562 * 15 14 13 17 17 C 1.38250 * 120.05537 * 359.97438 * 16 15 14 18 18 C 1.50699 * 119.94350 * 180.02562 * 17 16 15 19 19 O 1.42907 * 109.46603 * 245.00489 * 18 17 16 20 20 Si 1.86298 * 109.47032 * 4.99792 * 18 17 16 21 21 C 1.38283 * 120.10927 * 0.28064 * 17 16 15 22 22 C 1.38123 * 120.05817 * 359.44714 * 21 17 16 23 23 N 1.48005 * 120.03145 * 180.29616 * 22 21 17 24 24 O 1.21801 * 119.99854 * 0.25682 * 23 22 21 25 25 O 1.21799 * 120.00318 * 180.25205 * 23 22 21 26 26 C 1.53778 * 113.61763 * 87.49789 * 4 3 2 27 27 H 1.09003 * 109.47403 * 313.74055 * 3 2 1 28 28 H 1.09000 * 109.46961 * 193.74407 * 3 2 1 29 29 H 1.09004 * 113.61666 * 105.46630 * 6 4 3 30 30 H 1.08998 * 113.68882 * 334.57792 * 6 4 3 31 31 H 0.97005 * 119.99894 * 335.00103 * 9 7 6 32 32 H 1.09001 * 109.47546 * 59.99580 * 12 10 9 33 33 H 1.09001 * 109.46985 * 300.00024 * 12 10 9 34 34 H 1.08000 * 120.03287 * 359.97438 * 15 14 13 35 35 H 1.07995 * 119.97216 * 179.97438 * 16 15 14 36 36 H 1.08996 * 109.47117 * 125.00402 * 18 17 16 37 37 H 0.96697 * 114.00527 * 59.99993 * 19 18 17 38 38 H 1.48506 * 109.99834 * 58.68765 * 20 18 17 39 39 H 1.48502 * 110.00011 * 180.02562 * 20 18 17 40 40 H 1.07998 * 119.97325 * 179.70285 * 21 17 16 41 41 H 1.08996 * 113.61146 * 25.43612 * 26 4 3 42 42 H 1.08997 * 113.61822 * 254.53309 * 26 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1182 -0.4029 -1.3848 5 1 2.5763 -1.2494 -1.8065 6 6 4.6470 -0.5517 -1.4588 7 6 4.5667 0.1196 -2.8400 8 1 4.4222 -0.5842 -3.6597 9 7 5.6498 1.0729 -3.0930 10 6 6.0200 1.3521 -4.3586 11 8 5.4561 0.8144 -5.2879 12 6 7.1346 2.3324 -4.6188 13 8 7.3384 2.4590 -6.0275 14 6 8.3156 3.3108 -6.4354 15 6 9.0625 4.0106 -5.4993 16 6 10.0551 4.8764 -5.9167 17 6 10.3045 5.0451 -7.2660 18 6 11.3881 5.9896 -7.7183 19 8 10.8028 7.0754 -8.4399 20 14 12.2967 6.6499 -6.2320 21 6 9.5578 4.3524 -8.2013 22 6 8.5682 3.4815 -7.7891 23 7 7.7737 2.7355 -8.7906 24 8 7.9956 2.8860 -9.9787 25 8 6.8981 1.9711 -8.4266 26 6 3.2650 0.7802 -2.3561 27 1 2.9717 -0.7097 0.7425 28 1 2.9708 0.9991 0.2442 29 1 4.9836 -1.5878 -1.4957 30 1 5.1811 0.0406 -0.7159 31 1 6.1007 1.5033 -2.3497 32 1 8.0508 1.9740 -4.1495 33 1 6.8688 3.3038 -4.2018 34 1 8.8678 3.8796 -4.4451 35 1 10.6366 5.4219 -5.1882 36 1 12.0866 5.4583 -8.3648 37 1 10.1692 7.5936 -7.9251 38 1 12.8832 5.5280 -5.4555 39 1 13.3677 7.5832 -6.6646 40 1 9.7513 4.4894 -9.2550 41 1 3.4201 1.7373 -1.8581 42 1 2.4860 0.8194 -3.1174 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_4549638.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:37 Heat of formation + Delta-G solvation = -14.048306 kcal Electronic energy + Delta-G solvation = -29303.123500 eV Core-core repulsion = 24834.282689 eV Total energy + Delta-G solvation = -4468.840811 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.125 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.04362 -41.84510 -41.27040 -40.12119 -39.22217 -37.57599 -37.42091 -37.13989 -34.99370 -33.53058 -32.44464 -31.62269 -29.84760 -27.61072 -26.98782 -26.77882 -24.88602 -23.79409 -22.81947 -21.86813 -20.97532 -20.49655 -19.46586 -19.29414 -18.90440 -18.42497 -18.36579 -18.25186 -17.70039 -17.42420 -17.06592 -16.58735 -16.53693 -16.28395 -16.00433 -15.77357 -15.45165 -15.32898 -14.92555 -14.60282 -14.17403 -14.15706 -13.98829 -13.95070 -13.74278 -13.56438 -13.32718 -13.09400 -12.80401 -12.60207 -12.42962 -12.32885 -12.21770 -12.16595 -11.87330 -11.86702 -11.75281 -11.57640 -10.99593 -10.96141 -10.77721 -10.26353 -9.94715 -5.32840 -1.15878 -0.41190 0.35717 0.50991 0.98298 1.04831 1.34343 1.35331 1.74203 1.75705 1.80950 1.90259 2.16697 2.82989 2.95789 2.98944 3.16948 3.17768 3.24087 3.33819 3.37744 3.49210 3.51412 3.52946 3.59394 3.63951 3.67444 4.02387 4.10369 4.12871 4.16933 4.28230 4.33977 4.39634 4.40959 4.52684 4.58751 4.64659 4.74936 4.83766 4.89521 5.00045 5.28891 5.41937 5.67991 6.19049 6.30882 6.58370 6.91646 6.97415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.201 3.799 3 C -0.014 4.014 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.137 4.137 7 C 0.125 3.875 8 H 0.121 0.879 9 N -0.718 5.718 10 C 0.514 3.486 11 O -0.494 6.494 12 C 0.030 3.970 13 O -0.254 6.254 14 C 0.200 3.800 15 C -0.209 4.209 16 C -0.023 4.023 17 C -0.158 4.158 18 C -0.066 4.066 19 O -0.535 6.535 20 Si 0.690 3.310 21 C 0.010 3.990 22 C -0.075 4.075 23 N 0.028 4.972 24 O -0.177 6.177 25 O -0.118 6.118 26 C -0.152 4.152 27 H 0.114 0.886 28 H 0.110 0.890 29 H 0.084 0.916 30 H 0.094 0.906 31 H 0.402 0.598 32 H 0.102 0.898 33 H 0.102 0.898 34 H 0.157 0.843 35 H 0.149 0.851 36 H 0.121 0.879 37 H 0.381 0.619 38 H -0.254 1.254 39 H -0.248 1.248 40 H 0.164 0.836 41 H 0.091 0.909 42 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.025 4.327 11.190 13.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.109 5.109 2 C -0.117 4.117 3 C -0.054 4.054 4 C -0.127 4.127 5 H 0.123 0.877 6 C -0.175 4.175 7 C 0.020 3.980 8 H 0.139 0.861 9 N -0.371 5.371 10 C 0.297 3.703 11 O -0.366 6.366 12 C -0.049 4.049 13 O -0.163 6.163 14 C 0.150 3.850 15 C -0.229 4.229 16 C -0.041 4.041 17 C -0.159 4.159 18 C -0.176 4.176 19 O -0.341 6.341 20 Si 0.591 3.409 21 C -0.009 4.009 22 C -0.160 4.160 23 N 0.548 4.452 24 O -0.386 6.386 25 O -0.341 6.341 26 C -0.190 4.190 27 H 0.132 0.868 28 H 0.128 0.872 29 H 0.102 0.898 30 H 0.113 0.887 31 H 0.237 0.763 32 H 0.120 0.880 33 H 0.120 0.880 34 H 0.174 0.826 35 H 0.166 0.834 36 H 0.138 0.862 37 H 0.228 0.772 38 H -0.178 1.178 39 H -0.173 1.173 40 H 0.181 0.819 41 H 0.110 0.890 42 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 6.334 4.015 10.733 13.093 hybrid contribution 0.475 -0.334 -0.105 0.590 sum 6.809 3.681 10.627 13.147 Atomic orbital electron populations 1.81306 1.13149 1.08386 1.08029 1.29176 0.95309 0.93589 0.93631 1.19284 0.81785 1.05212 0.99089 1.22345 0.96459 0.99956 0.93931 0.87719 1.23417 0.95262 1.02431 0.96377 1.22550 0.85886 0.91560 0.97986 0.86148 1.45765 1.38200 1.46191 1.06991 1.19865 0.83912 0.82802 0.83680 1.90873 1.53429 1.49780 1.42538 1.22749 0.99791 1.01092 0.81226 1.86509 1.48838 1.57302 1.23634 1.18690 0.87324 0.88196 0.90777 1.21269 0.99881 1.01793 0.99914 1.21246 0.93891 0.93770 0.95201 1.20315 1.00961 1.01934 0.92709 1.25104 0.97064 0.88741 1.06724 1.86569 1.62529 1.42843 1.42122 0.94980 0.83578 0.83339 0.79018 1.20848 0.88821 0.88542 1.02721 1.20595 1.03122 1.06338 0.85919 1.43342 1.00375 1.00002 1.01465 1.94560 1.73702 1.70791 0.99504 1.94698 1.23328 1.30651 1.85462 1.23651 0.98176 0.98033 0.99168 0.86839 0.87219 0.89776 0.88741 0.76285 0.88035 0.87976 0.82554 0.83377 0.86198 0.77154 1.17849 1.17269 0.81858 0.89035 0.90405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.62 18.54 42.15 0.78 -0.84 16 2 C 0.20 -0.13 15.42 -20.76 -0.32 -0.45 16 3 C -0.01 0.08 5.54 -29.52 -0.16 -0.08 16 4 C -0.11 0.58 3.61 -89.81 -0.32 0.25 16 5 H 0.10 -0.46 8.12 -51.93 -0.42 -0.89 16 6 C -0.14 0.89 7.39 -25.92 -0.19 0.70 16 7 C 0.12 -0.47 4.24 -67.12 -0.28 -0.76 16 8 H 0.12 -0.15 7.46 -51.93 -0.39 -0.54 16 9 N -0.72 3.29 5.35 -53.02 -0.28 3.00 16 10 C 0.51 -0.42 7.91 -10.99 -0.09 -0.51 16 11 O -0.49 -2.52 16.10 -14.35 -0.23 -2.75 16 12 C 0.03 -0.11 5.22 36.00 0.19 0.08 16 13 O -0.25 -0.34 7.68 -49.80 -0.38 -0.73 16 14 C 0.20 0.00 6.67 -39.22 -0.26 -0.26 16 15 C -0.21 0.87 9.04 -39.43 -0.36 0.51 16 16 C -0.02 0.11 8.66 -39.60 -0.34 -0.24 16 17 C -0.16 0.40 5.35 -104.60 -0.56 -0.16 16 18 C -0.07 0.19 2.80 36.01 0.10 0.29 16 19 O -0.54 1.03 12.83 -35.23 -0.45 0.58 16 20 Si 0.69 -2.87 29.80 -169.99 -5.07 -7.94 16 21 C 0.01 0.00 9.18 -39.61 -0.36 -0.36 16 22 C -0.08 -0.17 6.87 -79.80 -0.55 -0.72 16 23 N 0.03 0.17 4.45 34.03 0.15 0.33 16 24 O -0.18 -1.24 18.45 -29.46 -0.54 -1.78 16 25 O -0.12 -0.96 17.24 -36.49 -0.63 -1.59 16 26 C -0.15 0.62 7.43 -25.92 -0.19 0.43 16 27 H 0.11 -0.88 8.14 -51.93 -0.42 -1.30 16 28 H 0.11 -0.87 7.84 -51.93 -0.41 -1.27 16 29 H 0.08 -0.52 8.14 -51.93 -0.42 -0.94 16 30 H 0.09 -0.80 8.08 -51.93 -0.42 -1.22 16 31 H 0.40 -3.35 8.73 -40.82 -0.36 -3.71 16 32 H 0.10 -0.71 7.66 -51.93 -0.40 -1.10 16 33 H 0.10 -0.72 7.66 -51.93 -0.40 -1.12 16 34 H 0.16 -1.24 6.30 -52.49 -0.33 -1.57 16 35 H 0.15 -1.11 4.90 -52.49 -0.26 -1.37 16 36 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 37 H 0.38 -2.28 8.70 45.56 0.40 -1.89 16 38 H -0.25 0.56 7.11 56.52 0.40 0.97 16 39 H -0.25 0.08 7.11 56.52 0.40 0.48 16 40 H 0.16 0.04 7.61 -52.49 -0.40 -0.36 16 41 H 0.09 -0.49 7.90 -51.93 -0.41 -0.90 16 42 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 373.34 15.07 5.63 5.63 Total: 0.00 -15.99 373.34 -9.40 -25.39 By element: Atomic # 1 Polarization: -13.35 SS G_CDS: -4.67 Total: -18.01 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -3.71 Total: -1.28 kcal Atomic # 7 Polarization: 1.84 SS G_CDS: 0.65 Total: 2.49 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -2.24 Total: -6.27 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: -5.07 Total: -7.94 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -15.99 -9.40 -25.39 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_4549638.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.343 kcal (2) G-P(sol) polarization free energy of solvation -15.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.048 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds