Wall clock time and date at job start Sun Mar 7 2021 06:34:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 C 1.52999 * 109.47034 * 277.22674 * 3 2 1 5 5 H 1.08999 * 112.85358 * 43.80529 * 4 3 2 6 6 C 1.53789 * 113.61319 * 272.49817 * 4 3 2 7 7 C 1.53779 * 87.08090 * 220.02241 * 6 4 3 8 8 H 1.09008 * 113.69087 * 270.87552 * 7 6 4 9 9 N 1.46501 * 113.61509 * 139.98397 * 7 6 4 10 10 C 1.34776 * 119.99886 * 107.50127 * 9 7 6 11 11 O 1.21597 * 120.00037 * 0.02562 * 10 9 7 12 12 C 1.47522 * 119.99903 * 180.02562 * 10 9 7 13 13 C 1.36597 * 125.77370 * 179.97438 * 12 10 9 14 14 N 1.34806 * 106.84351 * 180.02562 * 13 12 10 15 15 C 1.46500 * 126.59620 * 179.97438 * 14 13 12 16 16 C 1.53006 * 109.46998 * 124.99809 * 15 14 13 17 17 O 1.42906 * 109.46752 * 179.97438 * 16 15 14 18 18 C 1.35924 * 116.99842 * 179.97438 * 17 16 15 19 19 C 1.38667 * 120.05787 * 359.72803 * 18 17 16 20 20 C 1.38201 * 119.95738 * 179.79340 * 19 18 17 21 21 C 1.38234 * 120.07311 * 0.45700 * 20 19 18 22 22 C 1.50696 * 119.94071 * 179.76949 * 21 20 19 23 23 O 1.42894 * 109.47405 * 245.02360 * 22 21 20 24 24 Si 1.86302 * 109.47096 * 5.02764 * 22 21 20 25 25 C 1.38297 * 120.12106 * 359.79262 * 21 20 19 26 26 C 1.38212 * 120.03821 * 359.97438 * 25 21 20 27 27 Cl 1.73605 * 120.03479 * 179.97438 * 26 25 21 28 28 N 1.40218 * 106.80972 * 0.22627 * 14 13 12 29 29 N 1.28754 * 108.36412 * 359.61484 * 28 14 13 30 30 C 1.53779 * 87.08207 * 25.43429 * 7 6 4 31 31 H 1.09004 * 109.46380 * 157.22964 * 3 2 1 32 32 H 1.08996 * 109.47343 * 37.23101 * 3 2 1 33 33 H 1.09000 * 113.61083 * 105.47079 * 6 4 3 34 34 H 1.08994 * 113.61473 * 334.57043 * 6 4 3 35 35 H 0.96996 * 119.99617 * 287.50419 * 9 7 6 36 36 H 1.08006 * 126.57364 * 0.04851 * 13 12 10 37 37 H 1.09000 * 109.47175 * 4.99941 * 15 14 13 38 38 H 1.09001 * 109.47297 * 244.99448 * 15 14 13 39 39 H 1.08993 * 109.46955 * 300.00226 * 16 15 14 40 40 H 1.09000 * 109.47050 * 60.00054 * 16 15 14 41 41 H 1.08000 * 120.02354 * 359.97438 * 19 18 17 42 42 H 1.07992 * 119.96512 * 180.23007 * 20 19 18 43 43 H 1.09007 * 109.46962 * 125.02296 * 22 21 20 44 44 H 0.96698 * 114.00334 * 180.02562 * 23 22 21 45 45 H 1.48506 * 109.99620 * 299.99799 * 24 22 21 46 46 H 1.48497 * 110.00242 * 61.31218 * 24 22 21 47 47 H 1.07998 * 119.98075 * 179.97438 * 25 21 20 48 48 H 1.08995 * 113.61414 * 89.11644 * 30 7 6 49 49 H 1.09005 * 113.61262 * 220.02031 * 30 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1180 -0.1806 1.4310 5 1 2.5761 -0.9512 1.9792 6 6 3.2649 1.1405 2.2046 7 6 4.5665 0.5640 2.7863 8 1 4.4219 -0.0024 3.7064 9 7 5.6496 1.5453 2.8866 10 6 6.0196 2.0196 4.0927 11 8 5.4547 1.6327 5.0976 12 6 7.1099 3.0082 4.1937 13 6 7.5782 3.5653 5.3496 14 7 8.5684 4.4115 5.0023 15 6 9.3693 5.2379 5.9089 16 6 10.8549 4.9495 5.6834 17 8 11.6361 5.7560 6.5674 18 6 12.9866 5.6202 6.4954 19 6 13.5477 4.7254 5.5969 20 6 14.9213 4.5920 5.5223 21 6 15.7360 5.3428 6.3491 22 6 17.2331 5.1912 6.2689 23 8 17.7237 4.6512 7.4976 24 14 17.6669 4.0419 4.8683 25 6 15.1796 6.2324 7.2500 26 6 13.8067 6.3731 7.3252 27 17 13.1083 7.4893 8.4566 28 7 8.6804 4.3532 3.6058 29 7 7.8102 3.5135 3.1638 30 6 4.6469 -0.3157 1.5276 31 1 2.9708 0.9485 -0.3978 32 1 2.9717 -0.8174 -0.6217 33 1 2.4858 1.2986 2.9503 34 1 3.4200 2.0075 1.5626 35 1 6.1004 1.8536 2.0850 36 1 7.2234 3.3656 6.3500 37 1 9.1064 5.0047 6.9408 38 1 9.1697 6.2912 5.7123 39 1 11.0544 3.8962 5.8800 40 1 11.1177 5.1827 4.6516 41 1 12.9119 4.1351 4.9536 42 1 15.3585 3.8979 4.8200 43 1 17.6881 6.1660 6.0931 44 1 18.6825 4.5267 7.5175 45 1 17.0524 2.7092 5.0961 46 1 17.1900 4.6076 3.5808 47 1 15.8182 6.8174 7.8951 48 1 5.1798 0.1532 0.7005 49 1 4.9835 -1.3332 1.7268 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16663504_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:34:18 Heat of formation + Delta-G solvation = 72.833312 kcal Electronic energy + Delta-G solvation = -34630.647512 eV Core-core repulsion = 29589.221802 eV Total energy + Delta-G solvation = -5041.425710 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.124 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -43.38577 -41.62867 -41.06762 -39.53844 -39.41612 -37.78753 -37.46923 -37.19013 -36.21389 -34.74251 -32.66099 -32.20315 -32.12380 -31.19813 -30.47831 -26.80157 -26.60199 -25.84579 -25.58874 -24.13830 -23.38433 -22.89143 -22.39587 -21.50268 -20.66187 -19.89542 -18.96191 -18.60408 -18.42486 -17.94943 -17.64010 -17.32974 -17.24724 -17.01728 -16.98964 -16.26221 -16.18935 -15.94379 -15.73081 -15.63966 -15.50644 -15.27862 -15.09002 -14.96920 -14.81326 -14.46109 -14.13284 -13.99542 -13.89302 -13.84760 -13.55121 -13.47792 -13.30510 -13.20859 -12.89033 -12.83993 -12.64223 -12.57626 -12.49249 -12.23102 -12.15124 -12.08668 -12.01336 -11.85935 -11.53291 -11.53207 -11.30348 -11.15432 -10.52604 -10.34127 -10.15537 -9.99193 -9.46278 -4.94693 -0.20684 -0.05996 -0.01449 0.51782 0.67032 0.95639 1.30969 1.63901 1.81169 1.87573 1.88467 1.94121 2.12641 2.15717 2.21466 3.07405 3.10717 3.14754 3.29334 3.39718 3.52255 3.54833 3.55072 3.66659 3.73067 3.82426 3.85219 3.90003 3.91332 3.94164 3.97248 3.99145 4.15720 4.32803 4.35225 4.42091 4.45997 4.51705 4.56408 4.67144 4.69108 4.78767 4.81051 4.87983 4.93501 4.97202 5.06592 5.09777 5.19776 5.19986 5.31194 5.32573 5.63580 5.87356 6.39258 6.68105 6.78543 6.90457 7.10898 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.518 5.518 2 C 0.234 3.766 3 C -0.012 4.012 4 C -0.098 4.098 5 H 0.097 0.903 6 C -0.154 4.154 7 C 0.110 3.890 8 H 0.100 0.900 9 N -0.694 5.694 10 C 0.605 3.395 11 O -0.571 6.571 12 C -0.122 4.122 13 C 0.116 3.884 14 N -0.352 5.352 15 C 0.125 3.875 16 C 0.045 3.955 17 O -0.301 6.301 18 C 0.138 3.862 19 C -0.190 4.190 20 C -0.091 4.091 21 C -0.110 4.110 22 C -0.075 4.075 23 O -0.564 6.564 24 Si 0.771 3.229 25 C -0.048 4.048 26 C -0.077 4.077 27 Cl -0.052 7.052 28 N -0.084 5.084 29 N -0.211 5.211 30 C -0.118 4.118 31 H 0.137 0.863 32 H 0.145 0.855 33 H 0.054 0.946 34 H 0.102 0.898 35 H 0.418 0.582 36 H 0.236 0.764 37 H 0.150 0.850 38 H 0.124 0.876 39 H 0.081 0.919 40 H 0.081 0.919 41 H 0.157 0.843 42 H 0.130 0.870 43 H 0.098 0.902 44 H 0.405 0.595 45 H -0.294 1.294 46 H -0.286 1.286 47 H 0.155 0.845 48 H 0.118 0.882 49 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.693 -0.242 -1.763 10.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.196 5.196 2 C -0.082 4.082 3 C -0.051 4.051 4 C -0.118 4.118 5 H 0.115 0.885 6 C -0.193 4.193 7 C 0.006 3.994 8 H 0.118 0.882 9 N -0.344 5.344 10 C 0.390 3.610 11 O -0.449 6.449 12 C -0.262 4.262 13 C -0.041 4.041 14 N -0.137 5.137 15 C 0.005 3.995 16 C -0.031 4.031 17 O -0.214 6.214 18 C 0.092 3.908 19 C -0.208 4.208 20 C -0.109 4.109 21 C -0.111 4.111 22 C -0.185 4.185 23 O -0.374 6.374 24 Si 0.676 3.324 25 C -0.067 4.067 26 C -0.104 4.104 27 Cl -0.023 7.023 28 N -0.065 5.065 29 N -0.085 5.085 30 C -0.156 4.156 31 H 0.155 0.845 32 H 0.163 0.837 33 H 0.073 0.927 34 H 0.120 0.880 35 H 0.255 0.745 36 H 0.252 0.748 37 H 0.168 0.832 38 H 0.142 0.858 39 H 0.099 0.901 40 H 0.100 0.900 41 H 0.174 0.826 42 H 0.148 0.852 43 H 0.116 0.884 44 H 0.256 0.744 45 H -0.221 1.221 46 H -0.213 1.213 47 H 0.173 0.827 48 H 0.136 0.864 49 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 8.269 -0.200 -2.534 8.651 hybrid contribution -0.644 0.248 0.923 1.153 sum 7.625 0.048 -1.611 7.794 Atomic orbital electron populations 1.81312 1.15867 1.11580 1.10869 1.30108 0.96143 0.90915 0.91078 1.19688 0.78283 1.08485 0.98688 1.22241 0.97084 0.98116 0.94360 0.88488 1.23687 0.97039 0.98517 1.00017 1.22671 0.86187 0.90494 1.00090 0.88195 1.45743 1.36954 1.43387 1.08290 1.16915 0.80554 0.79435 0.84114 1.90822 1.56335 1.60725 1.37041 1.21532 1.05732 1.08610 0.90306 1.23923 0.88548 0.89028 1.02615 1.50324 1.25336 1.30357 1.07697 1.21894 0.87463 0.96448 0.93742 1.23002 0.89914 0.95703 0.94501 1.86004 1.13884 1.62268 1.59222 1.18601 0.82819 0.94730 0.94670 1.21313 0.96022 1.01722 1.01760 1.20994 0.93620 0.97812 0.98427 1.19572 0.95542 0.98073 0.97900 1.24763 0.90904 1.06096 0.96739 1.86443 1.29796 1.86122 1.35042 0.94169 0.89484 0.75391 0.73317 1.20954 0.91580 0.97142 0.97013 1.20378 0.92771 0.99188 0.98073 1.98386 1.84496 1.60189 1.59243 1.81996 1.19137 1.17958 0.87364 1.74595 1.02508 1.04616 1.26822 1.23368 0.94531 1.01065 0.96647 0.84518 0.83690 0.92676 0.87975 0.74465 0.74804 0.83247 0.85772 0.90121 0.90047 0.82582 0.85228 0.88390 0.74372 1.22141 1.21288 0.82716 0.86394 0.89137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.27 18.54 20.01 0.37 -4.90 16 2 C 0.23 0.08 15.42 89.44 1.38 1.46 16 3 C -0.01 0.14 5.54 28.79 0.16 0.30 16 4 C -0.10 0.93 3.62 -10.26 -0.04 0.89 16 5 H 0.10 -0.74 8.12 -2.39 -0.02 -0.76 16 6 C -0.15 0.82 7.43 31.12 0.23 1.05 16 7 C 0.11 -0.46 4.24 45.52 0.19 -0.27 16 8 H 0.10 0.01 7.46 -2.38 -0.02 -0.01 16 9 N -0.69 1.50 5.35 -443.20 -2.37 -0.87 16 10 C 0.60 2.10 7.82 86.69 0.68 2.78 16 11 O -0.57 -5.49 16.46 -4.02 -0.07 -5.55 16 12 C -0.12 -0.20 6.99 40.82 0.29 0.08 16 13 C 0.12 -0.37 11.27 83.85 0.95 0.58 16 14 N -0.35 1.22 3.69 -347.09 -1.28 -0.06 16 15 C 0.12 -1.08 6.91 86.38 0.60 -0.48 16 16 C 0.04 -0.24 4.95 71.98 0.36 0.11 16 17 O -0.30 0.13 9.60 -92.69 -0.89 -0.76 16 18 C 0.14 0.34 6.68 22.52 0.15 0.49 16 19 C -0.19 -0.20 9.04 22.36 0.20 0.00 16 20 C -0.09 -0.22 8.66 22.26 0.19 -0.03 16 21 C -0.11 -0.24 5.39 -19.85 -0.11 -0.35 16 22 C -0.08 0.23 2.79 71.23 0.20 0.43 16 23 O -0.56 1.45 12.81 -148.98 -1.91 -0.45 16 24 Si 0.77 -3.39 29.85 68.60 2.05 -1.34 16 25 C -0.05 -0.13 9.46 22.28 0.21 0.08 16 26 C -0.08 -0.30 6.33 22.41 0.14 -0.16 16 27 Cl -0.05 -0.20 28.51 -2.72 -0.08 -0.28 16 28 N -0.08 -0.22 13.65 37.02 0.51 0.28 16 29 N -0.21 -0.70 12.04 -49.99 -0.60 -1.30 16 30 C -0.12 1.33 7.39 31.12 0.23 1.56 16 31 H 0.14 -2.16 7.84 -2.38 -0.02 -2.18 16 32 H 0.15 -2.43 8.14 -2.39 -0.02 -2.45 16 33 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.10 -0.75 7.90 -2.39 -0.02 -0.76 16 35 H 0.42 -2.32 8.41 -92.71 -0.78 -3.10 16 36 H 0.24 -2.22 8.06 -2.91 -0.02 -2.24 16 37 H 0.15 -2.07 8.08 -2.39 -0.02 -2.09 16 38 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 39 H 0.08 -0.51 7.65 -2.39 -0.02 -0.53 16 40 H 0.08 -0.36 7.68 -2.39 -0.02 -0.38 16 41 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 42 H 0.13 0.16 4.86 -2.91 -0.01 0.14 16 43 H 0.10 -0.71 7.96 -2.38 -0.02 -0.73 16 44 H 0.40 -5.24 8.74 -74.06 -0.65 -5.88 16 45 H -0.29 -0.81 7.05 99.48 0.70 -0.11 16 46 H -0.29 -0.25 7.11 99.48 0.71 0.45 16 47 H 0.16 0.03 8.06 -2.91 -0.02 0.01 16 48 H 0.12 -1.79 8.08 -2.39 -0.02 -1.81 16 49 H 0.09 -1.05 8.14 -2.38 -0.02 -1.07 16 Total: 0.00 -33.38 442.33 1.39 -31.99 By element: Atomic # 1 Polarization: -24.92 SS G_CDS: -0.35 Total: -25.26 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: 6.01 Total: 8.51 kcal Atomic # 7 Polarization: -3.47 SS G_CDS: -3.38 Total: -6.85 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -2.86 Total: -6.76 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.05 Total: -1.34 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -0.08 Total: -0.28 kcal Total: -33.38 1.39 -31.99 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.822 kcal (2) G-P(sol) polarization free energy of solvation -33.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.444 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.988 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds