Wall clock time and date at job start Sun Mar 7 2021 06:31:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34230 * 117.00002 * 2 1 4 4 O 1.20818 * 120.00003 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99874 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.85297 * 48.79861 * 5 3 2 7 7 C 1.53781 * 113.61460 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08113 * 139.97875 * 7 5 3 9 9 H 1.09008 * 113.61663 * 219.93901 * 8 7 5 10 10 N 1.46499 * 113.61485 * 89.11541 * 8 7 5 11 11 C 1.35309 * 125.87027 * 276.55541 * 10 8 7 12 12 C 1.35353 * 106.17498 * 179.97438 * 11 10 8 13 13 C 1.50706 * 126.75076 * 179.97438 * 12 11 10 14 14 N 1.46499 * 109.46696 * 94.99878 * 13 12 11 15 15 C 1.34779 * 119.99924 * 179.97438 * 14 13 12 16 16 O 1.21284 * 120.00000 * 0.02562 * 15 14 13 17 17 C 1.50696 * 120.00299 * 179.97438 * 15 14 13 18 18 O 1.42904 * 109.47152 * 180.02562 * 17 15 14 19 19 C 1.35914 * 116.99954 * 180.02562 * 18 17 15 20 20 C 1.38791 * 120.06085 * 180.02562 * 19 18 17 21 21 Br 1.89100 * 120.03273 * 0.02562 * 20 19 18 22 22 C 1.38237 * 119.92985 * 180.02562 * 20 19 18 23 23 C 1.38241 * 120.04423 * 359.97438 * 22 20 19 24 24 C 1.50703 * 119.93738 * 180.02562 * 23 22 20 25 25 O 1.42905 * 109.47032 * 65.00239 * 24 23 22 26 26 Si 1.86306 * 109.46953 * 185.00204 * 24 23 22 27 27 C 1.38277 * 120.11898 * 359.97438 * 23 22 20 28 28 C 1.38139 * 120.07317 * 359.76645 * 27 23 22 29 29 N 1.33775 * 106.49785 * 359.97438 * 12 11 10 30 30 N 1.28637 * 108.88137 * 0.02562 * 29 12 11 31 31 C 1.53783 * 87.17280 * 334.52443 * 8 7 5 32 32 H 1.08996 * 109.47027 * 299.99927 * 1 2 3 33 33 H 1.09002 * 109.46935 * 60.00003 * 1 2 3 34 34 H 1.08997 * 109.47292 * 180.02562 * 1 2 3 35 35 H 1.09006 * 113.61476 * 25.43192 * 7 5 3 36 36 H 1.08997 * 113.61368 * 254.52841 * 7 5 3 37 37 H 1.08002 * 126.91313 * 0.02562 * 11 10 8 38 38 H 1.08998 * 109.46953 * 215.00023 * 13 12 11 39 39 H 1.08994 * 109.47138 * 335.00219 * 13 12 11 40 40 H 0.96994 * 120.00507 * 0.02562 * 14 13 12 41 41 H 1.08998 * 109.47388 * 300.00253 * 17 15 14 42 42 H 1.09006 * 109.47179 * 60.00627 * 17 15 14 43 43 H 1.07995 * 119.97503 * 179.97438 * 22 20 19 44 44 H 1.08993 * 109.47371 * 304.99694 * 24 23 22 45 45 H 0.96695 * 113.99670 * 60.00400 * 25 24 23 46 46 H 1.48499 * 110.00030 * 58.67793 * 26 24 23 47 47 H 1.48492 * 109.99995 * 180.02562 * 26 24 23 48 48 H 1.08000 * 119.96299 * 180.02562 * 27 23 22 49 49 H 1.08004 * 120.02418 * 180.24975 * 28 27 23 50 50 H 1.09007 * 113.60954 * 140.02182 * 31 8 7 51 51 H 1.08997 * 113.61881 * 270.92267 * 31 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0234 0.6364 -0.7566 7 6 4.1078 2.7142 -0.0011 8 6 5.1814 2.2270 0.9862 9 1 5.3978 2.9393 1.7825 10 7 6.3905 1.7178 0.3343 11 6 6.5618 0.4672 -0.1530 12 6 7.8143 0.4302 -0.6647 13 6 8.4840 -0.7472 -1.3254 14 7 8.3135 -0.6542 -2.7775 15 6 8.8336 -1.6045 -3.5793 16 8 9.4424 -2.5369 -3.0987 17 6 8.6577 -1.5092 -5.0730 18 8 9.2928 -2.6255 -5.6996 19 6 9.2273 -2.6916 -7.0555 20 6 9.8220 -3.7491 -7.7296 21 35 10.7240 -5.1006 -6.7623 22 6 9.7542 -3.8133 -9.1088 23 6 9.0943 -2.8256 -9.8160 24 6 9.0213 -2.8983 -11.3196 25 8 8.2568 -4.0427 -11.7046 26 14 8.2065 -1.3572 -11.9769 27 6 8.5002 -1.7718 -9.1463 28 6 8.5604 -1.7056 -7.7678 29 7 8.3409 1.6442 -0.4685 30 7 7.4722 2.3837 0.1258 31 6 4.1928 1.1236 1.3987 32 1 -0.3633 0.5138 0.8900 33 1 -0.3633 0.5138 -0.8900 34 1 -0.3634 -1.0276 0.0005 35 1 3.4175 3.4406 0.4279 36 1 4.5105 3.0288 -0.9639 37 1 5.8433 -0.3390 -0.1376 38 1 9.5468 -0.7436 -1.0834 39 1 8.0324 -1.6714 -0.9651 40 1 7.8269 0.0916 -3.1620 41 1 7.5949 -1.5135 -5.3147 42 1 9.1087 -0.5847 -5.4337 43 1 10.2170 -4.6356 -9.6341 44 1 10.0283 -2.9796 -11.7287 45 1 7.3479 -4.0375 -11.3747 46 1 8.9744 -0.1578 -11.5564 47 1 8.1279 -1.4168 -13.4586 48 1 7.9850 -1.0018 -9.7014 49 1 8.0927 -0.8842 -7.2453 50 1 4.6642 0.1550 1.5652 51 1 3.5257 1.4158 2.2096 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16723000_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:19 Heat of formation + Delta-G solvation = -11.543286 kcal Electronic energy + Delta-G solvation = -38523.260789 eV Core-core repulsion = 33054.445692 eV Total energy + Delta-G solvation = -5468.815097 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.077 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -44.52675 -41.89915 -41.64274 -40.60090 -39.77925 -39.09052 -37.49865 -37.21287 -36.29995 -34.08889 -33.59509 -32.65249 -31.90015 -30.58405 -29.94288 -29.55420 -27.72728 -27.34484 -26.87093 -26.18744 -24.34443 -23.97104 -22.65504 -22.36326 -22.18040 -21.67557 -20.71031 -19.56113 -19.10741 -18.69420 -18.20086 -17.96921 -17.78120 -17.57858 -17.50961 -17.37102 -17.05274 -16.79117 -16.36762 -16.16879 -15.86339 -15.73612 -15.64900 -15.56403 -15.16274 -14.95225 -14.69895 -14.55883 -14.41142 -14.29652 -14.08107 -13.83347 -13.78267 -13.71832 -13.62843 -13.61978 -13.32137 -12.92936 -12.69144 -12.34920 -12.22375 -12.16431 -12.12034 -11.99524 -11.89554 -11.85566 -11.83143 -11.83057 -11.50412 -11.21246 -11.20026 -11.02946 -10.41672 -10.36571 -10.23296 -9.95911 -9.30521 -4.98105 -0.03865 0.13340 0.46614 0.65994 1.03378 1.07518 1.20080 1.34462 1.48532 1.66330 1.67432 1.68303 2.02426 2.41159 2.60861 2.77967 3.06600 3.17433 3.30183 3.49786 3.52266 3.63232 3.67402 3.69778 3.77657 3.85300 3.94987 4.00302 4.05936 4.11417 4.13653 4.16667 4.20561 4.28107 4.31365 4.34466 4.45777 4.50086 4.51980 4.60075 4.62878 4.66102 4.72857 4.73380 4.86095 4.86522 4.91185 4.99504 5.01670 5.23206 5.25090 5.34142 5.49745 5.56622 6.07592 6.42152 6.62890 6.80891 7.11494 7.39393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.112 4.112 6 H 0.149 0.851 7 C -0.118 4.118 8 C 0.109 3.891 9 H 0.143 0.857 10 N -0.267 5.267 11 C -0.007 4.007 12 C -0.051 4.051 13 C 0.215 3.785 14 N -0.706 5.706 15 C 0.517 3.483 16 O -0.564 6.564 17 C 0.033 3.967 18 O -0.304 6.304 19 C 0.150 3.850 20 C -0.144 4.144 21 Br -0.054 7.054 22 C -0.036 4.036 23 C -0.153 4.153 24 C -0.075 4.075 25 O -0.557 6.557 26 Si 0.787 3.213 27 C -0.053 4.053 28 C -0.189 4.189 29 N -0.287 5.287 30 N -0.107 5.107 31 C -0.108 4.108 32 H 0.062 0.938 33 H 0.060 0.940 34 H 0.127 0.873 35 H 0.121 0.879 36 H 0.086 0.914 37 H 0.234 0.766 38 H 0.068 0.932 39 H 0.104 0.896 40 H 0.417 0.583 41 H 0.137 0.863 42 H 0.126 0.874 43 H 0.135 0.865 44 H 0.104 0.896 45 H 0.396 0.604 46 H -0.278 1.278 47 H -0.305 1.305 48 H 0.167 0.833 49 H 0.180 0.820 50 H 0.118 0.882 51 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.887 3.228 1.626 12.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.275 6.275 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.131 4.131 6 H 0.167 0.833 7 C -0.156 4.156 8 C 0.007 3.993 9 H 0.161 0.839 10 N -0.059 5.059 11 C -0.160 4.160 12 C -0.190 4.190 13 C 0.090 3.910 14 N -0.361 5.361 15 C 0.303 3.697 16 O -0.442 6.442 17 C -0.045 4.045 18 O -0.216 6.216 19 C 0.102 3.898 20 C -0.224 4.224 21 Br 0.031 6.969 22 C -0.056 4.056 23 C -0.155 4.155 24 C -0.184 4.184 25 O -0.366 6.366 26 Si 0.693 3.307 27 C -0.071 4.071 28 C -0.208 4.208 29 N -0.154 5.154 30 N -0.086 5.086 31 C -0.146 4.146 32 H 0.081 0.919 33 H 0.079 0.921 34 H 0.145 0.855 35 H 0.139 0.861 36 H 0.104 0.896 37 H 0.250 0.750 38 H 0.087 0.913 39 H 0.122 0.878 40 H 0.254 0.746 41 H 0.155 0.845 42 H 0.144 0.856 43 H 0.153 0.847 44 H 0.121 0.879 45 H 0.246 0.754 46 H -0.205 1.205 47 H -0.233 1.233 48 H 0.183 0.817 49 H 0.197 0.803 50 H 0.137 0.863 51 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -9.906 4.134 1.920 10.904 hybrid contribution -0.329 -0.535 -0.310 0.700 sum -10.236 3.599 1.610 10.969 Atomic orbital electron populations 1.23526 0.75012 1.05603 1.02465 1.86510 1.24678 1.32962 1.83390 1.23860 0.92300 0.81099 0.71186 1.90703 1.67843 1.37506 1.46473 1.22908 0.86610 1.01008 1.02598 0.83307 1.23348 0.95727 0.95733 1.00793 1.22712 0.79896 0.99769 0.96888 0.83883 1.47323 1.12172 1.08881 1.37538 1.23974 0.99843 0.90570 1.01570 1.21894 0.94226 0.95215 1.07687 1.19292 1.00142 0.93095 0.78453 1.45641 1.57229 1.26924 1.06273 1.20398 0.78451 0.81913 0.88938 1.90807 1.41737 1.34445 1.77161 1.22841 1.01952 0.90317 0.89372 1.86245 1.72864 1.45998 1.16490 1.18797 0.94593 0.93813 0.82624 1.21270 1.08916 0.97507 0.94732 1.96761 1.76175 1.49065 1.74881 1.20874 0.95946 0.98588 0.90176 1.20360 1.01998 0.96427 0.96710 1.25253 1.00365 1.00781 0.91991 1.86491 1.29376 1.43415 1.77279 0.93829 0.87387 0.72331 0.77188 1.21243 0.95512 0.96408 0.93924 1.21573 1.03900 1.00286 0.95063 1.75142 1.23384 1.03242 1.13613 1.78409 0.91235 1.21387 1.17525 1.23440 0.95585 1.00164 0.95389 0.91932 0.92149 0.85461 0.86117 0.89560 0.75009 0.91349 0.87762 0.74577 0.84520 0.85647 0.84722 0.87889 0.75393 1.20513 1.23297 0.81657 0.80288 0.86331 0.85333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.17 10.56 113.37 1.20 1.02 16 2 O -0.36 1.59 10.57 -51.41 -0.54 1.05 16 3 C 0.47 -1.92 7.49 71.24 0.53 -1.39 16 4 O -0.54 -1.67 15.65 21.99 0.34 -1.33 16 5 C -0.11 1.28 3.83 -10.92 -0.04 1.24 16 6 H 0.15 -2.30 6.87 -2.39 -0.02 -2.32 16 7 C -0.12 1.13 7.20 31.12 0.22 1.35 16 8 C 0.11 -1.16 5.10 45.52 0.23 -0.92 16 9 H 0.14 -1.65 8.14 -2.38 -0.02 -1.67 16 10 N -0.27 1.45 3.52 -324.66 -1.14 0.30 16 11 C -0.01 0.06 9.61 83.49 0.80 0.86 16 12 C -0.05 0.14 6.62 41.60 0.28 0.42 16 13 C 0.22 -0.63 6.23 85.64 0.53 -0.10 16 14 N -0.71 3.82 5.55 -466.79 -2.59 1.23 16 15 C 0.52 0.20 7.91 87.66 0.69 0.89 16 16 O -0.56 -6.76 16.50 15.99 0.26 -6.50 16 17 C 0.03 -0.19 5.22 71.23 0.37 0.18 16 18 O -0.30 -1.16 9.00 -73.54 -0.66 -1.82 16 19 C 0.15 0.26 6.68 22.52 0.15 0.41 16 20 C -0.14 -0.77 6.24 22.40 0.14 -0.63 16 21 Br -0.05 -0.50 33.16 -20.37 -0.68 -1.18 16 22 C -0.04 -0.10 9.42 22.27 0.21 0.11 16 23 C -0.15 0.28 5.35 -19.85 -0.11 0.18 16 24 C -0.07 0.18 2.80 71.24 0.20 0.38 16 25 O -0.56 0.54 12.83 -148.98 -1.91 -1.37 16 26 Si 0.79 -4.28 29.80 68.60 2.04 -2.24 16 27 C -0.05 0.34 8.66 22.26 0.19 0.53 16 28 C -0.19 1.13 9.04 22.36 0.20 1.34 16 29 N -0.29 -1.37 12.41 -48.59 -0.60 -1.97 16 30 N -0.11 -0.35 13.16 37.02 0.49 0.14 16 31 C -0.11 1.56 6.90 31.21 0.22 1.78 16 32 H 0.06 -0.36 8.13 -2.39 -0.02 -0.38 16 33 H 0.06 -0.32 8.13 -2.39 -0.02 -0.34 16 34 H 0.13 -1.44 8.14 -2.39 -0.02 -1.46 16 35 H 0.12 -0.96 7.44 -2.38 -0.02 -0.98 16 36 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 37 H 0.23 -4.07 6.70 -2.91 -0.02 -4.09 16 38 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 39 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.42 -4.59 8.46 -92.71 -0.78 -5.37 16 41 H 0.14 -1.90 7.65 -2.39 -0.02 -1.92 16 42 H 0.13 -1.45 7.67 -2.38 -0.02 -1.46 16 43 H 0.13 0.46 8.06 -2.91 -0.02 0.44 16 44 H 0.10 -0.04 7.96 -2.39 -0.02 -0.06 16 45 H 0.40 -3.76 8.70 -74.06 -0.64 -4.41 16 46 H -0.28 0.44 7.11 99.48 0.71 1.15 16 47 H -0.30 -1.00 7.11 99.48 0.71 -0.29 16 48 H 0.17 -2.09 4.90 -2.91 -0.01 -2.10 16 49 H 0.18 -2.56 6.30 -2.91 -0.02 -2.58 16 50 H 0.12 -2.09 7.06 -2.38 -0.02 -2.10 16 51 H 0.13 -1.98 8.10 -2.39 -0.02 -1.99 16 Total: 0.00 -39.83 454.05 0.68 -39.14 By element: Atomic # 1 Polarization: -32.75 SS G_CDS: -0.35 Total: -33.10 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: 6.02 Total: 7.64 kcal Atomic # 7 Polarization: 3.55 SS G_CDS: -3.85 Total: -0.30 kcal Atomic # 8 Polarization: -7.46 SS G_CDS: -2.51 Total: -9.97 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.04 Total: -2.24 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.18 kcal Total: -39.83 0.68 -39.14 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16723000_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.601 kcal (2) G-P(sol) polarization free energy of solvation -39.825 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.224 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.88 seconds