Wall clock time and date at job start Sun Mar 7 2021 06:41:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37641 * 125.67646 * 2 1 4 4 C 1.46676 * 126.22397 * 0.04185 * 3 2 1 5 5 O 1.21693 * 119.99988 * 4.97785 * 4 3 2 6 6 N 1.34782 * 119.99699 * 184.97239 * 4 3 2 7 7 C 1.46492 * 119.99858 * 184.65133 * 6 4 3 8 8 H 1.09004 * 109.47589 * 325.00292 * 7 6 4 9 9 C 1.52996 * 109.47066 * 85.00397 * 7 6 4 10 10 C 1.53003 * 109.47237 * 179.97438 * 9 7 6 11 11 C 1.52995 * 109.47242 * 300.00054 * 10 9 7 12 12 H 1.09002 * 109.47245 * 299.99769 * 11 10 9 13 13 N 1.46502 * 109.47225 * 179.97438 * 11 10 9 14 14 C 1.47063 * 126.30254 * 299.69053 * 13 11 10 15 15 C 1.54323 * 109.96939 * 150.90372 * 14 13 11 16 16 C 1.55602 * 104.18964 * 45.50459 * 15 14 13 17 17 S 1.67005 * 126.29926 * 120.00175 * 13 11 10 18 18 O 1.42101 * 105.13106 * 298.89047 * 17 13 11 19 19 O 1.42101 * 105.13383 * 68.44515 * 17 13 11 20 20 C 1.53005 * 109.47041 * 59.99930 * 11 10 9 21 21 C 1.52995 * 109.47132 * 205.00279 * 7 6 4 22 22 C 1.37882 * 107.54822 * 180.02562 * 3 2 1 23 23 C 1.39876 * 107.09082 * 0.02562 * 22 3 2 24 24 Br 1.89101 * 126.07274 * 179.97438 * 23 22 3 25 25 C 1.35504 * 107.85582 * 359.73531 * 23 22 3 26 26 C 1.50702 * 125.57289 * 180.30021 * 25 23 22 27 27 O 1.42902 * 109.46995 * 121.43294 * 26 25 23 28 28 Si 1.86303 * 109.46589 * 241.43184 * 26 25 23 29 29 H 1.08997 * 109.47248 * 83.93272 * 1 2 3 30 30 H 1.09005 * 109.46855 * 323.93899 * 1 2 3 31 31 H 1.08994 * 109.47070 * 203.93920 * 1 2 3 32 32 H 0.97004 * 119.99624 * 4.66068 * 6 4 3 33 33 H 1.09003 * 109.47041 * 299.99718 * 9 7 6 34 34 H 1.09002 * 109.47147 * 60.00054 * 9 7 6 35 35 H 1.09006 * 109.47396 * 179.97438 * 10 9 7 36 36 H 1.09002 * 109.46812 * 60.00089 * 10 9 7 37 37 H 1.09006 * 109.35886 * 271.18499 * 14 13 11 38 38 H 1.08994 * 109.35542 * 30.82671 * 14 13 11 39 39 H 1.08997 * 110.64722 * 286.77444 * 15 14 13 40 40 H 1.08999 * 110.49212 * 164.16098 * 15 14 13 41 41 H 1.08998 * 111.16656 * 204.05588 * 16 15 14 42 42 H 1.09009 * 111.20366 * 79.80931 * 16 15 14 43 43 H 1.09003 * 109.47033 * 180.02562 * 20 11 10 44 44 H 1.09002 * 109.47232 * 59.99832 * 20 11 10 45 45 H 1.08997 * 109.47513 * 300.00420 * 21 7 6 46 46 H 1.09005 * 109.47498 * 60.00259 * 21 7 6 47 47 H 1.08000 * 126.45490 * 179.97438 * 22 3 2 48 48 H 1.08995 * 109.47280 * 1.43156 * 26 25 23 49 49 H 0.96707 * 113.99193 * 179.97438 * 27 26 25 50 50 H 1.48498 * 110.00240 * 303.18681 * 28 26 25 51 51 H 1.48496 * 110.00447 * 64.51225 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5123 0.0009 5 8 0.6252 2.7644 0.0931 6 7 2.7081 3.5141 -0.1004 7 6 2.2646 4.9065 0.0027 8 1 1.2771 5.0077 -0.4475 9 6 2.1973 5.3124 1.4763 10 6 1.7347 6.7668 1.5841 11 6 2.7255 7.6728 0.8504 12 1 3.7130 7.5713 1.3007 13 7 2.2823 9.0654 0.9531 14 6 1.0098 9.6127 0.4594 15 6 0.5815 10.8153 1.3266 16 6 1.8814 11.6566 1.4807 17 16 3.1324 10.3249 1.6459 18 8 3.3089 9.9500 3.0051 19 8 4.2394 10.5447 0.7824 20 6 2.7929 7.2669 -0.6233 21 6 3.2550 5.8128 -0.7311 22 6 3.5782 0.6891 -0.0006 23 6 3.5528 -0.7095 -0.0015 24 35 5.0609 -1.8504 -0.0033 25 6 2.2558 -1.1015 0.0044 26 6 1.7713 -2.5285 0.0121 27 8 0.9567 -2.7488 1.1654 28 14 0.7712 -2.8529 -1.5259 29 1 -0.3633 0.1086 -1.0219 30 1 -0.3633 0.8308 0.6050 31 1 -0.3633 -0.9392 0.4170 32 1 3.6465 3.3130 -0.2418 33 1 1.4916 4.6667 1.9992 34 1 3.1848 5.2112 1.9266 35 1 1.6863 7.0559 2.6340 36 1 0.7473 6.8684 1.1338 37 1 1.1320 9.9349 -0.5748 38 1 0.2416 8.8410 0.5077 39 1 0.2271 10.4796 2.3011 40 1 -0.1901 11.3953 0.8203 41 1 1.8454 12.2761 2.3767 42 1 2.0664 12.2625 0.5936 43 1 3.4991 7.9120 -1.1459 44 1 1.8055 7.3684 -1.0737 45 1 4.2425 5.7117 -0.2809 46 1 3.3030 5.5237 -1.7810 47 1 4.4583 1.3150 -0.0011 48 1 2.6273 -3.2027 0.0378 49 1 0.6090 -3.6485 1.2352 50 1 -0.3553 -1.8891 -1.6119 51 1 1.6348 -2.7335 -2.7280 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16729364_5000100.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:41:08 Heat of formation + Delta-G solvation = -76.502614 kcal Electronic energy + Delta-G solvation = -36465.568832 eV Core-core repulsion = 31540.800421 eV Total energy + Delta-G solvation = -4924.768412 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 462.070 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.96411 -41.00337 -39.61117 -38.15556 -37.79079 -37.65599 -36.98246 -35.61850 -34.53862 -33.30399 -32.18729 -31.87651 -31.07657 -29.39885 -27.52276 -27.27928 -26.62232 -24.06565 -23.73870 -23.23619 -22.62252 -21.53622 -21.01455 -20.32245 -19.93397 -18.93351 -18.56312 -18.41196 -17.89656 -17.47498 -17.19364 -16.97591 -16.81858 -16.24070 -16.10337 -15.65295 -15.54374 -15.42959 -15.27170 -15.04355 -14.81428 -14.66581 -14.50189 -14.49771 -14.38513 -14.22146 -14.04595 -13.88737 -13.67576 -13.42329 -13.33524 -13.26505 -13.24558 -13.11013 -12.82253 -12.64665 -12.51403 -12.32877 -12.18593 -12.09639 -12.05857 -11.97674 -11.60609 -11.51732 -11.42136 -11.29273 -11.14379 -10.64954 -10.27621 -9.92115 -9.91139 -9.39094 -5.13311 -0.81205 0.03362 0.51561 0.88245 1.23007 1.35476 1.49439 1.53943 1.86135 2.04705 2.16485 2.60748 2.98372 3.09476 3.32370 3.42942 3.55457 3.59012 3.60590 3.64852 3.68498 3.85784 3.96773 3.97182 4.04034 4.06201 4.12009 4.15483 4.23913 4.35089 4.36004 4.36858 4.41499 4.46447 4.49694 4.54647 4.61341 4.64577 4.68637 4.83989 4.91064 5.01268 5.03998 5.04963 5.10152 5.11976 5.15067 5.29167 5.31328 5.42466 5.49290 5.65612 5.70418 6.32245 6.77265 6.96324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.399 5.399 3 C -0.053 4.053 4 C 0.592 3.408 5 O -0.573 6.573 6 N -0.700 5.700 7 C 0.150 3.850 8 H 0.081 0.919 9 C -0.125 4.125 10 C -0.119 4.119 11 C 0.184 3.816 12 H 0.077 0.923 13 N -0.988 5.988 14 C 0.068 3.932 15 C -0.124 4.124 16 C -0.565 4.565 17 S 2.549 3.451 18 O -1.006 7.006 19 O -1.003 7.003 20 C -0.120 4.120 21 C -0.120 4.120 22 C -0.104 4.104 23 C -0.179 4.179 24 Br -0.011 7.011 25 C 0.078 3.922 26 C -0.061 4.061 27 O -0.557 6.557 28 Si 0.777 3.223 29 H 0.077 0.923 30 H 0.096 0.904 31 H 0.111 0.889 32 H 0.416 0.584 33 H 0.054 0.946 34 H 0.073 0.927 35 H 0.066 0.934 36 H 0.079 0.921 37 H 0.092 0.908 38 H 0.105 0.895 39 H 0.096 0.904 40 H 0.140 0.860 41 H 0.158 0.842 42 H 0.164 0.836 43 H 0.076 0.924 44 H 0.082 0.918 45 H 0.083 0.917 46 H 0.086 0.914 47 H 0.183 0.817 48 H 0.105 0.895 49 H 0.411 0.589 50 H -0.270 1.270 51 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.025 -1.267 -3.263 6.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.072 5.072 3 C -0.168 4.168 4 C 0.380 3.620 5 O -0.454 6.454 6 N -0.351 5.351 7 C 0.046 3.954 8 H 0.099 0.901 9 C -0.164 4.164 10 C -0.159 4.159 11 C 0.079 3.921 12 H 0.095 0.905 13 N -0.829 5.829 14 C -0.057 4.057 15 C -0.163 4.163 16 C -0.700 4.700 17 S 2.652 3.348 18 O -0.995 6.995 19 O -0.992 6.992 20 C -0.159 4.159 21 C -0.159 4.159 22 C -0.130 4.130 23 C -0.265 4.265 24 Br 0.073 6.927 25 C -0.043 4.043 26 C -0.171 4.171 27 O -0.368 6.368 28 Si 0.679 3.321 29 H 0.095 0.905 30 H 0.115 0.885 31 H 0.129 0.871 32 H 0.254 0.746 33 H 0.073 0.927 34 H 0.092 0.908 35 H 0.084 0.916 36 H 0.098 0.902 37 H 0.110 0.890 38 H 0.123 0.877 39 H 0.115 0.885 40 H 0.158 0.842 41 H 0.176 0.824 42 H 0.182 0.818 43 H 0.095 0.905 44 H 0.101 0.899 45 H 0.102 0.898 46 H 0.105 0.895 47 H 0.200 0.800 48 H 0.122 0.878 49 H 0.264 0.736 50 H -0.196 1.196 51 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges -4.838 -0.631 -3.424 5.961 hybrid contribution 0.214 0.611 0.233 0.688 sum -4.624 -0.020 -3.191 5.618 Atomic orbital electron populations 1.22586 0.74723 1.06438 1.04129 1.43961 1.07626 1.04307 1.51337 1.20263 0.90319 0.88008 1.18178 1.16910 0.85529 0.83581 0.75984 1.90796 1.17329 1.85060 1.52184 1.45633 1.11460 1.05374 1.72586 1.21079 0.99599 0.78759 0.95920 0.90057 1.21863 1.02315 0.96050 0.96178 1.21801 0.99850 0.93139 1.01100 1.20662 0.97063 0.77804 0.96539 0.90515 1.57226 1.30706 1.19045 1.75939 1.22372 0.86937 0.97192 0.99247 1.22843 0.96248 0.94040 1.03158 1.30673 1.11888 1.13183 1.14262 1.06763 0.76119 0.78460 0.73496 1.93564 1.86395 1.82013 1.37530 1.93566 1.52533 1.85926 1.67215 1.21826 1.03464 0.95386 0.95269 1.21761 0.98918 0.93511 1.01663 1.21558 0.95593 0.92979 1.02917 1.20999 0.91430 0.95096 1.18943 1.96658 1.35067 1.62753 1.98197 1.20095 0.89295 0.89030 1.05846 1.24534 1.01378 0.90242 1.00897 1.86423 1.68444 1.38513 1.43390 0.94694 0.77798 0.87706 0.71894 0.90463 0.88521 0.87071 0.74645 0.92692 0.90793 0.91571 0.90203 0.88999 0.87683 0.88518 0.84213 0.82391 0.81806 0.90539 0.89934 0.89827 0.89545 0.79999 0.87763 0.73605 1.19627 1.22294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.31 8.52 127.77 1.09 1.40 16 2 N -0.40 -2.86 3.11 -519.60 -1.62 -4.47 16 3 C -0.05 -0.34 6.88 40.35 0.28 -0.06 16 4 C 0.59 3.71 7.74 86.45 0.67 4.38 16 5 O -0.57 -6.95 14.41 -4.33 -0.06 -7.02 16 6 N -0.70 0.37 5.05 -446.52 -2.26 -1.88 16 7 C 0.15 -0.21 2.49 44.99 0.11 -0.10 16 8 H 0.08 0.15 7.51 -2.38 -0.02 0.13 16 9 C -0.12 0.01 5.49 30.59 0.17 0.18 16 10 C -0.12 0.13 5.29 30.59 0.16 0.29 16 11 C 0.18 -0.15 2.96 44.99 0.13 -0.01 16 12 H 0.08 0.10 8.10 -2.39 -0.02 0.08 16 13 N -0.99 1.61 3.11 -489.66 -1.52 0.09 16 14 C 0.07 -0.59 6.27 86.72 0.54 -0.04 16 15 C -0.12 1.39 6.81 31.94 0.22 1.61 16 16 C -0.57 4.85 7.51 72.88 0.55 5.40 16 17 S 2.55 6.11 6.15 -56.49 -0.35 5.76 16 18 O -1.01 -11.00 18.13 -127.76 -2.32 -13.31 16 19 O -1.00 -10.37 18.14 -127.76 -2.32 -12.69 16 20 C -0.12 0.46 5.30 30.58 0.16 0.62 16 21 C -0.12 0.61 5.39 30.58 0.16 0.77 16 22 C -0.10 -0.35 10.33 22.58 0.23 -0.11 16 23 C -0.18 -0.98 6.53 22.03 0.14 -0.83 16 24 Br -0.01 -0.04 33.05 -20.37 -0.67 -0.71 16 25 C 0.08 0.44 5.20 41.35 0.21 0.66 16 26 C -0.06 0.03 2.79 71.24 0.20 0.23 16 27 O -0.56 1.29 11.59 -148.98 -1.73 -0.44 16 28 Si 0.78 -2.14 31.21 68.60 2.14 0.00 16 29 H 0.08 0.38 7.45 -2.39 -0.02 0.36 16 30 H 0.10 0.70 6.57 -2.38 -0.02 0.69 16 31 H 0.11 0.22 5.71 -2.39 -0.01 0.21 16 32 H 0.42 -2.35 7.54 -92.71 -0.70 -3.05 16 33 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 34 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 36 H 0.08 -0.22 7.23 -2.39 -0.02 -0.24 16 37 H 0.09 -1.04 8.14 -2.38 -0.02 -1.06 16 38 H 0.10 -1.09 7.13 -2.39 -0.02 -1.11 16 39 H 0.10 -1.04 8.14 -2.39 -0.02 -1.06 16 40 H 0.14 -2.22 8.14 -2.39 -0.02 -2.24 16 41 H 0.16 -1.74 8.14 -2.39 -0.02 -1.76 16 42 H 0.16 -1.99 8.14 -2.38 -0.02 -2.01 16 43 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 44 H 0.08 -0.46 7.99 -2.39 -0.02 -0.48 16 45 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 46 H 0.09 -0.53 8.14 -2.38 -0.02 -0.55 16 47 H 0.18 -0.57 7.48 -2.91 -0.02 -0.60 16 48 H 0.10 -0.26 6.94 -2.39 -0.02 -0.28 16 49 H 0.41 -5.46 8.74 -74.05 -0.65 -6.11 16 50 H -0.27 -0.38 5.55 99.48 0.55 0.17 16 51 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 Total: 0.00 -34.32 430.05 -6.14 -40.46 By element: Atomic # 1 Polarization: -19.68 SS G_CDS: -0.48 Total: -20.15 kcal Atomic # 6 Polarization: 9.33 SS G_CDS: 5.04 Total: 14.37 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -5.40 Total: -6.26 kcal Atomic # 8 Polarization: -27.04 SS G_CDS: -6.42 Total: -33.46 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: 2.14 Total: 0.00 kcal Atomic # 16 Polarization: 6.11 SS G_CDS: -0.35 Total: 5.76 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -0.67 Total: -0.71 kcal Total: -34.32 -6.14 -40.46 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16729364_5000100.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.041 kcal (2) G-P(sol) polarization free energy of solvation -34.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds