Wall clock time and date at job start Sun Mar 7 2021 05:46:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34229 * 117.00160 * 2 1 4 4 O 1.20830 * 119.99604 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00141 * 180.02562 * 3 2 1 6 6 H 1.09001 * 109.47598 * 59.99725 * 5 3 2 7 7 C 1.53001 * 109.47071 * 179.97438 * 5 3 2 8 8 C 1.53006 * 109.46906 * 179.97438 * 7 5 3 9 9 C 1.53003 * 109.46803 * 299.99655 * 8 7 5 10 10 F 1.39904 * 109.46735 * 179.97438 * 9 8 7 11 11 C 1.52996 * 109.47530 * 300.00085 * 9 8 7 12 12 N 1.46498 * 109.47059 * 184.99929 * 11 9 8 13 13 C 1.34777 * 119.99828 * 179.72339 * 12 11 9 14 14 O 1.21283 * 120.00222 * 0.28168 * 13 12 11 15 15 C 1.50703 * 120.00290 * 180.27728 * 13 12 11 16 16 N 1.46492 * 109.47441 * 180.02562 * 15 13 12 17 17 C 1.36833 * 125.06064 * 265.02531 * 16 15 13 18 18 C 1.34243 * 109.93554 * 179.97438 * 17 16 15 19 19 C 1.50702 * 126.49799 * 180.02562 * 18 17 16 20 20 O 1.42904 * 109.46826 * 254.97765 * 19 18 17 21 21 Si 1.86295 * 109.47383 * 14.97217 * 19 18 17 22 22 C 1.46489 * 107.00198 * 0.02562 * 18 17 16 23 23 C 1.39588 * 134.04086 * 180.02562 * 22 18 17 24 24 C 1.36658 * 119.76390 * 179.97438 * 23 22 18 25 25 C 1.38793 * 120.53316 * 359.97438 * 24 23 22 26 26 C 1.37786 * 120.66009 * 0.02562 * 25 24 23 27 27 C 1.37690 * 125.06175 * 84.71985 * 16 15 13 28 28 C 1.53001 * 109.47108 * 60.00469 * 9 8 7 29 29 C 1.52993 * 109.46941 * 299.99923 * 28 9 8 30 30 H 1.09001 * 109.47010 * 300.00720 * 1 2 3 31 31 H 1.09001 * 109.46845 * 60.00387 * 1 2 3 32 32 H 1.09000 * 109.46813 * 180.02562 * 1 2 3 33 33 H 1.09001 * 109.47260 * 59.99893 * 7 5 3 34 34 H 1.08997 * 109.47107 * 299.99486 * 7 5 3 35 35 H 1.09002 * 109.46678 * 180.02562 * 8 7 5 36 36 H 1.09001 * 109.47177 * 59.99929 * 8 7 5 37 37 H 1.09004 * 109.47066 * 65.00196 * 11 9 8 38 38 H 1.08994 * 109.46974 * 305.00344 * 11 9 8 39 39 H 0.97001 * 120.00384 * 0.02562 * 12 11 9 40 40 H 1.08998 * 109.46954 * 300.00581 * 15 13 12 41 41 H 1.09002 * 109.46946 * 59.99717 * 15 13 12 42 42 H 1.07995 * 125.03767 * 359.96318 * 17 16 15 43 43 H 1.08996 * 109.47134 * 134.97588 * 19 18 17 44 44 H 0.96700 * 113.99808 * 180.02562 * 20 19 18 45 45 H 1.48499 * 110.00266 * 300.00174 * 21 19 18 46 46 H 1.48506 * 110.00057 * 61.31991 * 21 19 18 47 47 H 1.08000 * 120.11496 * 359.94990 * 23 22 18 48 48 H 1.08003 * 119.73485 * 179.97438 * 24 23 22 49 49 H 1.07990 * 119.66719 * 180.02562 * 25 24 23 50 50 H 1.08006 * 120.10995 * 179.97438 * 26 25 24 51 51 H 1.09001 * 109.46786 * 59.99727 * 28 9 8 52 52 H 1.09001 * 109.47309 * 179.97438 * 28 9 8 53 53 H 1.09001 * 109.47220 * 299.99537 * 29 28 9 54 54 H 1.09006 * 109.47371 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 3.9558 0.7809 -0.8908 7 6 4.0001 2.7421 -0.0011 8 6 5.5281 2.8221 -0.0011 9 6 6.0750 2.1290 1.2486 10 9 7.4721 2.2017 1.2483 11 6 5.5279 2.8230 2.4975 12 7 6.1434 2.2373 3.6909 13 6 5.8146 2.6982 4.9139 14 8 5.0054 3.5945 5.0269 15 6 6.4525 2.0999 6.1413 16 7 5.9321 2.7676 7.3368 17 6 6.5316 3.8205 7.9728 18 6 5.7962 4.1944 9.0318 19 6 6.1101 5.3136 9.9910 20 8 6.5791 4.7660 11.2248 21 14 7.4266 6.4090 9.2577 22 6 4.6308 3.3081 9.0784 23 6 3.5278 3.1991 9.9270 24 6 2.5850 2.2376 9.6942 25 6 2.7148 1.3684 8.6200 26 6 3.7955 1.4583 7.7699 27 6 4.7640 2.4331 7.9845 28 6 5.6412 0.6618 1.2491 29 6 4.1133 0.5818 1.2489 30 1 -0.3633 0.5140 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 3.6107 3.2364 0.8889 34 1 3.6101 3.2359 -0.8911 35 1 5.8371 3.8674 -0.0010 36 1 5.9178 2.3276 -0.8908 37 1 4.4470 2.6894 2.5434 38 1 5.7609 3.8869 2.4534 39 1 6.7909 1.5206 3.6006 40 1 6.2201 1.0361 6.1895 41 1 7.5331 2.2338 6.0911 42 1 7.4590 4.2824 7.6680 43 1 5.2094 5.8998 10.1726 44 1 6.8005 5.4308 11.8912 45 1 8.6601 5.6215 9.0053 46 1 6.9393 7.0098 7.9900 47 1 3.4202 3.8721 10.7649 48 1 1.7321 2.1535 10.3513 49 1 1.9613 0.6140 8.4487 50 1 3.8878 0.7770 6.9369 51 1 6.0310 0.1674 0.3593 52 1 6.0311 0.1679 2.1391 53 1 3.7235 1.0762 2.1387 54 1 3.8042 -0.4635 1.2497 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16738254_9818708.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:46:58 Heat of formation + Delta-G solvation = -131.811214 kcal Electronic energy + Delta-G solvation = -39485.183708 eV Core-core repulsion = 34303.739965 eV Total energy + Delta-G solvation = -5181.443743 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.183 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -48.88824 -42.66668 -41.90485 -40.87443 -39.44413 -38.13265 -37.65676 -37.58027 -35.87679 -34.32004 -32.60289 -32.07782 -31.49974 -30.39022 -29.53987 -28.68779 -27.36567 -25.60091 -24.50762 -24.16056 -23.82358 -22.79468 -21.82297 -21.75546 -20.67540 -20.36117 -18.80763 -18.69368 -18.37932 -18.29401 -18.02923 -17.86477 -17.69763 -17.39988 -17.14494 -16.54195 -16.41409 -16.34386 -16.03520 -15.54596 -15.40517 -15.18892 -15.11115 -14.97225 -14.90062 -14.82750 -14.73447 -14.48979 -14.23960 -14.15976 -14.09194 -13.77422 -13.65316 -13.45647 -13.33480 -13.18817 -12.79975 -12.78960 -12.76359 -12.66449 -12.50485 -12.38468 -12.27443 -12.09049 -11.90379 -11.83442 -11.56120 -11.46464 -11.33187 -11.19932 -10.66805 -10.40130 -10.20148 -9.27750 -8.75932 -5.00275 0.02801 0.55298 1.03235 1.25925 1.26306 1.30386 1.46899 1.63567 1.66921 1.95442 1.99812 2.87097 3.13377 3.17830 3.24312 3.39421 3.43305 3.45840 3.55848 3.61113 3.64160 3.69050 3.77143 3.87756 3.94515 3.99002 4.04875 4.15812 4.16823 4.20442 4.22422 4.23442 4.23989 4.26512 4.33659 4.43764 4.50237 4.56944 4.59518 4.65363 4.69263 4.69793 4.81651 4.86274 4.88170 4.92985 4.96052 5.04302 5.05504 5.12484 5.20707 5.30733 5.42634 5.56754 5.63523 5.64457 5.99688 6.12598 6.25338 6.58803 6.91453 6.98233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.359 6.359 3 C 0.461 3.539 4 O -0.542 6.542 5 C -0.078 4.078 6 H 0.141 0.859 7 C -0.105 4.105 8 C -0.131 4.131 9 C 0.116 3.884 10 F -0.208 7.208 11 C 0.097 3.903 12 N -0.707 5.707 13 C 0.493 3.507 14 O -0.570 6.570 15 C 0.087 3.913 16 N -0.467 5.467 17 C 0.051 3.949 18 C -0.179 4.179 19 C -0.046 4.046 20 O -0.564 6.564 21 Si 0.785 3.215 22 C -0.120 4.120 23 C -0.082 4.082 24 C -0.151 4.151 25 C -0.101 4.101 26 C -0.136 4.136 27 C 0.091 3.909 28 C -0.131 4.131 29 C -0.107 4.107 30 H 0.057 0.943 31 H 0.060 0.940 32 H 0.131 0.869 33 H 0.060 0.940 34 H 0.080 0.920 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.084 0.916 38 H 0.062 0.938 39 H 0.420 0.580 40 H 0.152 0.848 41 H 0.155 0.845 42 H 0.174 0.826 43 H 0.075 0.925 44 H 0.399 0.601 45 H -0.280 1.280 46 H -0.303 1.303 47 H 0.128 0.872 48 H 0.144 0.856 49 H 0.151 0.849 50 H 0.135 0.865 51 H 0.105 0.895 52 H 0.096 0.904 53 H 0.061 0.939 54 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.549 -5.261 -2.030 6.663 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.275 6.275 3 C 0.305 3.695 4 O -0.432 6.432 5 C -0.097 4.097 6 H 0.159 0.841 7 C -0.143 4.143 8 C -0.169 4.169 9 C 0.098 3.902 10 F -0.188 7.188 11 C -0.028 4.028 12 N -0.362 5.362 13 C 0.278 3.722 14 O -0.448 6.448 15 C -0.037 4.037 16 N -0.150 5.150 17 C -0.074 4.074 18 C -0.186 4.186 19 C -0.155 4.155 20 O -0.374 6.374 21 Si 0.690 3.310 22 C -0.124 4.124 23 C -0.100 4.100 24 C -0.170 4.170 25 C -0.120 4.120 26 C -0.156 4.156 27 C -0.014 4.014 28 C -0.168 4.168 29 C -0.145 4.145 30 H 0.075 0.925 31 H 0.079 0.921 32 H 0.149 0.851 33 H 0.079 0.921 34 H 0.099 0.901 35 H 0.101 0.899 36 H 0.124 0.876 37 H 0.102 0.898 38 H 0.080 0.920 39 H 0.258 0.742 40 H 0.170 0.830 41 H 0.172 0.828 42 H 0.191 0.809 43 H 0.093 0.907 44 H 0.250 0.750 45 H -0.207 1.207 46 H -0.231 1.231 47 H 0.146 0.854 48 H 0.162 0.838 49 H 0.168 0.832 50 H 0.153 0.847 51 H 0.123 0.877 52 H 0.115 0.885 53 H 0.080 0.920 54 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 3.348 -4.899 -3.218 6.750 hybrid contribution -0.620 -0.065 -0.352 0.716 sum 2.728 -4.964 -3.570 6.695 Atomic orbital electron populations 1.23516 0.75167 1.05654 1.02264 1.86495 1.24583 1.32918 1.83526 1.24355 0.93042 0.81053 0.71045 1.90696 1.68202 1.37605 1.46648 1.21277 0.85212 0.99292 1.03876 0.84092 1.21434 0.94943 0.94018 1.03878 1.22068 0.94825 1.02623 0.97353 1.21200 0.75485 0.98351 0.95182 1.92890 1.30834 1.97589 1.97534 1.22055 0.99136 0.97921 0.83672 1.45674 1.45992 1.40044 1.04454 1.21405 0.82115 0.82836 0.85819 1.90810 1.35476 1.31558 1.86959 1.21977 1.02068 0.99768 0.79924 1.43377 1.19139 1.28755 1.23734 1.21717 0.99079 0.91339 0.95290 1.20052 0.96951 1.01809 0.99803 1.24212 1.06410 0.97078 0.87828 1.86482 1.87569 1.38706 1.24616 0.94283 0.75076 0.80599 0.81044 1.19355 0.97142 0.98254 0.97669 1.20501 0.92484 0.98755 0.98306 1.20986 1.00129 0.96445 0.99421 1.21198 0.97180 0.99476 0.94170 1.20271 0.94251 0.98816 1.02294 1.18491 0.89374 0.99050 0.94521 1.22115 0.95387 0.92981 1.06319 1.21542 0.95067 1.02585 0.95266 0.92456 0.92105 0.85111 0.92092 0.90143 0.89873 0.87607 0.89753 0.91996 0.74167 0.83042 0.82786 0.80924 0.90750 0.75030 1.20695 1.23056 0.85397 0.83812 0.83154 0.84709 0.87660 0.88512 0.92045 0.87983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.40 10.47 -51.41 -0.54 -0.93 16 3 C 0.46 1.29 7.25 71.23 0.52 1.81 16 4 O -0.54 -5.68 15.73 21.95 0.35 -5.33 16 5 C -0.08 0.36 2.63 -11.54 -0.03 0.33 16 6 H 0.14 -1.34 8.14 -2.39 -0.02 -1.36 16 7 C -0.11 0.30 4.22 30.60 0.13 0.43 16 8 C -0.13 0.76 5.19 30.60 0.16 0.91 16 9 C 0.12 -0.64 1.07 -10.79 -0.01 -0.65 16 10 F -0.21 0.45 16.46 44.97 0.74 1.19 16 11 C 0.10 -0.10 4.14 86.38 0.36 0.26 16 12 N -0.71 2.39 5.17 -463.07 -2.40 -0.01 16 13 C 0.49 1.48 7.90 87.66 0.69 2.17 16 14 O -0.57 -8.43 16.42 -3.04 -0.05 -8.48 16 15 C 0.09 -0.19 6.48 85.64 0.55 0.36 16 16 N -0.47 -3.50 2.27 -520.00 -1.18 -4.68 16 17 C 0.05 0.48 9.89 83.00 0.82 1.31 16 18 C -0.18 -2.08 5.61 -18.62 -0.10 -2.18 16 19 C -0.05 -0.24 3.05 71.24 0.22 -0.02 16 20 O -0.56 -2.45 12.86 -148.98 -1.92 -4.37 16 21 Si 0.79 0.94 30.79 68.60 2.11 3.05 16 22 C -0.12 -1.61 6.35 -20.20 -0.13 -1.74 16 23 C -0.08 -0.86 10.05 22.23 0.22 -0.63 16 24 C -0.15 -1.03 9.97 22.03 0.22 -0.81 16 25 C -0.10 -0.56 10.01 22.30 0.22 -0.33 16 26 C -0.14 -0.96 9.99 22.37 0.22 -0.74 16 27 C 0.09 1.00 6.80 39.03 0.27 1.26 16 28 C -0.13 1.28 5.06 30.59 0.15 1.44 16 29 C -0.11 0.78 4.86 30.59 0.15 0.93 16 30 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 31 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 32 H 0.13 -0.97 8.14 -2.39 -0.02 -0.98 16 33 H 0.06 0.08 6.50 -2.39 -0.02 0.07 16 34 H 0.08 -0.11 8.10 -2.39 -0.02 -0.13 16 35 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 36 H 0.11 -0.93 8.14 -2.39 -0.02 -0.95 16 37 H 0.08 0.10 4.83 -2.38 -0.01 0.09 16 38 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.42 -4.14 7.46 -92.71 -0.69 -4.83 16 40 H 0.15 -1.32 8.14 -2.39 -0.02 -1.34 16 41 H 0.15 -1.36 8.12 -2.39 -0.02 -1.38 16 42 H 0.17 0.95 6.30 -2.91 -0.02 0.93 16 43 H 0.07 0.25 7.96 -2.39 -0.02 0.24 16 44 H 0.40 -2.76 8.74 -74.06 -0.65 -3.40 16 45 H -0.28 -1.49 7.04 99.48 0.70 -0.79 16 46 H -0.30 -2.68 7.11 99.48 0.71 -1.97 16 47 H 0.13 0.99 8.06 -2.91 -0.02 0.96 16 48 H 0.14 0.24 8.06 -2.91 -0.02 0.22 16 49 H 0.15 -0.06 8.06 -2.92 -0.02 -0.08 16 50 H 0.14 0.24 8.06 -2.91 -0.02 0.21 16 51 H 0.10 -1.28 8.14 -2.39 -0.02 -1.30 16 52 H 0.10 -1.18 7.18 -2.39 -0.02 -1.20 16 53 H 0.06 -0.24 6.32 -2.39 -0.02 -0.26 16 54 H 0.10 -0.92 8.11 -2.38 -0.02 -0.94 16 Total: 0.00 -35.37 440.51 2.59 -32.78 By element: Atomic # 1 Polarization: -18.12 SS G_CDS: -0.35 Total: -18.48 kcal Atomic # 6 Polarization: -0.57 SS G_CDS: 5.83 Total: 5.25 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: -3.58 Total: -4.69 kcal Atomic # 8 Polarization: -16.95 SS G_CDS: -2.16 Total: -19.11 kcal Atomic # 9 Polarization: 0.45 SS G_CDS: 0.74 Total: 1.19 kcal Atomic # 14 Polarization: 0.94 SS G_CDS: 2.11 Total: 3.05 kcal Total: -35.37 2.59 -32.78 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738254_9818708.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.031 kcal (2) G-P(sol) polarization free energy of solvation -35.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds