Wall clock time and date at job start Sun Mar 7 2021 05:51:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34227 * 117.00136 * 2 1 4 4 O 1.20825 * 119.99806 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00146 * 179.97438 * 3 2 1 6 6 H 1.09001 * 109.47024 * 60.00494 * 5 3 2 7 7 C 1.53002 * 109.46988 * 180.02562 * 5 3 2 8 8 C 1.53004 * 109.46816 * 180.02562 * 7 5 3 9 9 C 1.53003 * 109.47293 * 299.99913 * 8 7 5 10 10 F 1.39906 * 109.47232 * 300.00680 * 9 8 7 11 11 C 1.52998 * 109.47265 * 180.02562 * 9 8 7 12 12 N 1.46505 * 109.46963 * 180.02562 * 11 9 8 13 13 C 1.34773 * 119.99637 * 179.97438 * 12 11 9 14 14 O 1.21276 * 120.00520 * 0.02562 * 13 12 11 15 15 C 1.50708 * 119.99612 * 180.02562 * 13 12 11 16 16 N 1.46500 * 109.46781 * 179.97438 * 15 13 12 17 17 C 1.36824 * 125.06496 * 264.99492 * 16 15 13 18 18 C 1.34233 * 109.94057 * 179.97438 * 17 16 15 19 19 C 1.50709 * 126.50256 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.46774 * 104.97975 * 19 18 17 21 21 Si 1.86307 * 109.46832 * 344.98271 * 19 18 17 22 22 C 1.46485 * 107.00140 * 0.02562 * 18 17 16 23 23 C 1.39586 * 134.03686 * 179.97438 * 22 18 17 24 24 C 1.36668 * 119.76775 * 180.02562 * 23 22 18 25 25 C 1.38789 * 120.52306 * 359.97438 * 24 23 22 26 26 C 1.37795 * 120.66819 * 0.02562 * 25 24 23 27 27 C 1.37698 * 125.06207 * 84.99888 * 16 15 13 28 28 C 1.53005 * 109.46878 * 59.99795 * 9 8 7 29 29 C 1.52998 * 109.47586 * 300.00309 * 28 9 8 30 30 H 1.08998 * 109.47208 * 299.99243 * 1 2 3 31 31 H 1.09002 * 109.47165 * 59.99686 * 1 2 3 32 32 H 1.08997 * 109.47065 * 179.97438 * 1 2 3 33 33 H 1.08999 * 109.46743 * 60.00818 * 7 5 3 34 34 H 1.08995 * 109.47443 * 300.00353 * 7 5 3 35 35 H 1.08997 * 109.47064 * 180.02562 * 8 7 5 36 36 H 1.08993 * 109.47142 * 60.00248 * 8 7 5 37 37 H 1.08997 * 109.47324 * 60.00338 * 11 9 8 38 38 H 1.09001 * 109.47123 * 299.99928 * 11 9 8 39 39 H 0.96997 * 119.99794 * 359.97438 * 12 11 9 40 40 H 1.08997 * 109.47057 * 60.00049 * 15 13 12 41 41 H 1.09001 * 109.46936 * 299.99918 * 15 13 12 42 42 H 1.08004 * 125.02818 * 0.03130 * 17 16 15 43 43 H 1.08994 * 109.47451 * 224.97987 * 19 18 17 44 44 H 0.96706 * 114.00094 * 300.00305 * 20 19 18 45 45 H 1.48503 * 109.99647 * 179.97438 * 21 19 18 46 46 H 1.48501 * 109.99802 * 301.31625 * 21 19 18 47 47 H 1.08004 * 120.12136 * 0.02562 * 23 22 18 48 48 H 1.08000 * 119.73957 * 180.02562 * 24 23 22 49 49 H 1.07999 * 119.66632 * 180.28309 * 25 24 23 50 50 H 1.07998 * 120.10653 * 179.97438 * 26 25 24 51 51 H 1.09001 * 109.46889 * 60.00452 * 28 9 8 52 52 H 1.08997 * 109.46714 * 179.97438 * 28 9 8 53 53 H 1.09001 * 109.47123 * 299.99999 * 29 28 9 54 54 H 1.08997 * 109.47324 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9564 0.7806 -0.8892 7 6 4.0001 2.7421 0.0011 8 6 5.5281 2.8221 0.0011 9 6 6.0752 2.1281 1.2500 10 9 5.5750 2.7618 2.3926 11 6 7.6031 2.2087 1.2503 12 7 8.1269 1.5435 2.4459 13 6 9.4566 1.4897 2.6590 14 8 10.2195 1.9923 1.8613 15 6 9.9956 0.8051 3.8887 16 7 11.4586 0.8813 3.8883 17 6 12.2962 -0.0910 3.4138 18 6 13.5738 0.2935 3.5614 19 6 14.7978 -0.4910 3.1642 20 8 15.3580 0.0699 1.9753 21 14 14.3232 -2.2650 2.8500 22 6 13.5529 1.6204 4.1816 23 6 14.5421 2.5218 4.5783 24 6 14.1865 3.7138 5.1444 25 6 12.8490 4.0358 5.3277 26 6 11.8563 3.1608 4.9435 27 6 12.1955 1.9420 4.3656 28 6 5.6413 0.6608 1.2495 29 6 4.1134 0.5807 1.2495 30 1 -0.3633 0.5137 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 3.6101 3.2358 0.8911 34 1 3.6107 3.2364 -0.8888 35 1 5.8371 3.8673 0.0019 36 1 5.9177 2.3284 -0.8891 37 1 7.9118 3.2540 1.2509 38 1 7.9931 1.7151 0.3601 39 1 7.5168 1.1420 3.0841 40 1 9.6865 -0.2402 3.8874 41 1 9.6058 1.2981 4.7793 42 1 11.9767 -1.0286 2.9834 43 1 15.5332 -0.4485 3.9675 44 1 14.7575 0.0651 1.2173 45 1 15.5214 -3.0493 2.4569 46 1 13.7100 -2.8503 4.0693 47 1 15.5850 2.2782 4.4384 48 1 14.9522 4.4110 5.4508 49 1 12.5834 4.9836 5.7723 50 1 10.8184 3.4205 5.0908 51 1 6.0310 0.1670 0.3593 52 1 6.0315 0.1663 2.1390 53 1 3.7237 1.0745 2.1397 54 1 3.8044 -0.4645 1.2487 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16738318_9818708.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:51:40 Heat of formation + Delta-G solvation = -136.363692 kcal Electronic energy + Delta-G solvation = -38582.167785 eV Core-core repulsion = 33400.526632 eV Total energy + Delta-G solvation = -5181.641153 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.183 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -48.79727 -42.51655 -41.73284 -40.64037 -38.89958 -38.09781 -37.63755 -37.50294 -35.98752 -34.09887 -32.73252 -31.96880 -31.40065 -30.22979 -29.44810 -28.67513 -27.16772 -25.60994 -24.09144 -23.90686 -23.56184 -22.63340 -21.66291 -21.60885 -20.72871 -20.63187 -18.85279 -18.66534 -18.42991 -17.82939 -17.76354 -17.66637 -17.33840 -16.94569 -16.85278 -16.43902 -16.40034 -16.25390 -16.06342 -15.71977 -15.33367 -15.11479 -15.01150 -14.90800 -14.81290 -14.70105 -14.56624 -14.29994 -14.14588 -14.03460 -13.96399 -13.64371 -13.56374 -13.27784 -13.11171 -13.04202 -13.00343 -12.76928 -12.71684 -12.57004 -12.22196 -12.13439 -12.10389 -11.93124 -11.86283 -11.80270 -11.66440 -11.30860 -11.16872 -11.07726 -10.55131 -10.28197 -10.23443 -9.15684 -8.62008 -4.97727 0.14277 0.62744 1.09726 1.39025 1.41096 1.48622 1.70003 1.70790 1.73082 2.03192 2.18416 2.93904 3.20862 3.33059 3.50844 3.53389 3.58681 3.67220 3.68371 3.70465 3.74539 3.90067 3.91834 3.93964 4.05797 4.18244 4.19124 4.21351 4.21919 4.27674 4.29124 4.30299 4.39891 4.47353 4.49280 4.56310 4.57689 4.68554 4.71210 4.72196 4.76382 4.78930 4.88560 4.92833 5.00208 5.05047 5.10188 5.13229 5.18464 5.24333 5.32957 5.39353 5.50023 5.65449 5.72925 5.75737 6.20429 6.22501 6.43770 6.65159 6.85036 7.11064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.460 3.540 4 O -0.544 6.544 5 C -0.077 4.077 6 H 0.140 0.860 7 C -0.103 4.103 8 C -0.134 4.134 9 C 0.112 3.888 10 F -0.216 7.216 11 C 0.105 3.895 12 N -0.711 5.711 13 C 0.496 3.504 14 O -0.566 6.566 15 C 0.086 3.914 16 N -0.466 5.466 17 C 0.083 3.917 18 C -0.226 4.226 19 C -0.048 4.048 20 O -0.565 6.565 21 Si 0.798 3.202 22 C -0.117 4.117 23 C -0.091 4.091 24 C -0.154 4.154 25 C -0.110 4.110 26 C -0.134 4.134 27 C 0.090 3.910 28 C -0.132 4.132 29 C -0.109 4.109 30 H 0.058 0.942 31 H 0.059 0.941 32 H 0.130 0.870 33 H 0.055 0.945 34 H 0.073 0.927 35 H 0.080 0.920 36 H 0.114 0.886 37 H 0.061 0.939 38 H 0.099 0.901 39 H 0.418 0.582 40 H 0.170 0.830 41 H 0.137 0.863 42 H 0.212 0.788 43 H 0.090 0.910 44 H 0.391 0.609 45 H -0.303 1.303 46 H -0.274 1.274 47 H 0.116 0.884 48 H 0.135 0.865 49 H 0.144 0.856 50 H 0.131 0.869 51 H 0.113 0.887 52 H 0.099 0.901 53 H 0.059 0.941 54 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.794 -7.414 -1.142 10.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.305 3.695 4 O -0.434 6.434 5 C -0.096 4.096 6 H 0.158 0.842 7 C -0.141 4.141 8 C -0.172 4.172 9 C 0.094 3.906 10 F -0.197 7.197 11 C -0.020 4.020 12 N -0.366 5.366 13 C 0.281 3.719 14 O -0.444 6.444 15 C -0.038 4.038 16 N -0.149 5.149 17 C -0.042 4.042 18 C -0.234 4.234 19 C -0.157 4.157 20 O -0.372 6.372 21 Si 0.702 3.298 22 C -0.121 4.121 23 C -0.110 4.110 24 C -0.173 4.173 25 C -0.129 4.129 26 C -0.155 4.155 27 C -0.015 4.015 28 C -0.169 4.169 29 C -0.146 4.146 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.149 0.851 33 H 0.074 0.926 34 H 0.092 0.908 35 H 0.099 0.901 36 H 0.132 0.868 37 H 0.079 0.921 38 H 0.117 0.883 39 H 0.256 0.744 40 H 0.187 0.813 41 H 0.155 0.845 42 H 0.229 0.771 43 H 0.108 0.892 44 H 0.240 0.760 45 H -0.231 1.231 46 H -0.200 1.200 47 H 0.134 0.866 48 H 0.153 0.847 49 H 0.161 0.839 50 H 0.149 0.851 51 H 0.132 0.868 52 H 0.117 0.883 53 H 0.078 0.922 54 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -6.235 -7.531 -1.063 9.835 hybrid contribution -0.316 1.253 0.802 1.521 sum -6.551 -6.278 -0.261 9.077 Atomic orbital electron populations 1.23509 0.75232 1.05627 1.02245 1.86497 1.24547 1.32978 1.83552 1.24427 0.93157 0.80984 0.70915 1.90683 1.68259 1.37668 1.46780 1.21278 0.85059 0.99313 1.03932 0.84219 1.21350 0.95590 0.93922 1.03230 1.22093 0.94649 1.02674 0.97801 1.21331 0.91626 0.94373 0.83292 1.92868 1.89102 1.84324 1.53384 1.21890 0.91728 0.98737 0.89610 1.45736 1.06575 1.58481 1.25800 1.21336 0.82505 0.79995 0.88049 1.90815 1.58193 1.47349 1.48011 1.21993 0.77428 1.06890 0.97491 1.43444 1.05314 1.14221 1.51871 1.22104 0.88226 0.94854 0.99061 1.20804 0.95117 0.96184 1.11266 1.24725 0.93741 1.08479 0.88739 1.86444 1.44266 1.85583 1.20941 0.93991 0.82140 0.70009 0.83627 1.19381 0.92652 0.96220 1.03853 1.20442 0.98487 0.93779 0.98244 1.20901 0.97025 0.97290 1.02071 1.21113 0.92272 0.99697 0.99793 1.20242 1.00334 0.92029 1.02846 1.18375 0.90667 0.91142 1.01358 1.22180 0.95071 0.93049 1.06592 1.21498 0.95857 1.02094 0.95158 0.92356 0.92236 0.85140 0.92620 0.90806 0.90127 0.86784 0.92066 0.88297 0.74410 0.81256 0.84482 0.77146 0.89219 0.75985 1.23064 1.20037 0.86617 0.84737 0.83869 0.85104 0.86841 0.88308 0.92220 0.88329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.12 16 2 O -0.36 -0.01 10.47 -51.38 -0.54 -0.55 16 3 C 0.46 0.88 7.26 71.24 0.52 1.40 16 4 O -0.54 -5.25 15.73 21.97 0.35 -4.91 16 5 C -0.08 0.43 2.63 -11.54 -0.03 0.40 16 6 H 0.14 -1.52 8.14 -2.39 -0.02 -1.54 16 7 C -0.10 0.34 4.37 30.60 0.13 0.48 16 8 C -0.13 1.05 5.00 30.60 0.15 1.20 16 9 C 0.11 -0.93 0.85 -10.79 -0.01 -0.94 16 10 F -0.22 0.44 15.63 44.97 0.70 1.14 16 11 C 0.10 -0.72 4.88 86.38 0.42 -0.30 16 12 N -0.71 6.28 5.19 -463.05 -2.40 3.88 16 13 C 0.50 -1.70 7.90 87.66 0.69 -1.01 16 14 O -0.57 -4.39 16.42 -3.02 -0.05 -4.44 16 15 C 0.09 -0.75 6.48 85.64 0.56 -0.20 16 16 N -0.47 -0.17 2.27 -519.99 -1.18 -1.35 16 17 C 0.08 -0.08 9.89 83.00 0.82 0.75 16 18 C -0.23 -1.13 5.57 -18.63 -0.10 -1.23 16 19 C -0.05 -0.18 3.06 71.24 0.22 0.04 16 20 O -0.56 -3.27 12.88 -148.98 -1.92 -5.19 16 21 Si 0.80 -1.86 30.76 68.60 2.11 0.25 16 22 C -0.12 -1.18 6.35 -20.20 -0.13 -1.30 16 23 C -0.09 -0.94 10.05 22.23 0.22 -0.72 16 24 C -0.15 -1.17 9.97 22.03 0.22 -0.95 16 25 C -0.11 -0.64 10.01 22.30 0.22 -0.41 16 26 C -0.13 -0.78 10.00 22.37 0.22 -0.56 16 27 C 0.09 0.64 6.80 39.03 0.27 0.91 16 28 C -0.13 1.68 4.83 30.60 0.15 1.83 16 29 C -0.11 0.95 5.02 30.59 0.15 1.10 16 30 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 31 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 32 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 33 H 0.05 0.11 7.76 -2.39 -0.02 0.09 16 34 H 0.07 -0.12 8.10 -2.39 -0.02 -0.14 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.11 -1.41 8.14 -2.39 -0.02 -1.43 16 37 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 38 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 39 H 0.42 -5.98 7.26 -92.71 -0.67 -6.65 16 40 H 0.17 -3.04 8.12 -2.39 -0.02 -3.05 16 41 H 0.14 -1.67 8.14 -2.39 -0.02 -1.69 16 42 H 0.21 -2.21 6.35 -2.91 -0.02 -2.23 16 43 H 0.09 0.57 7.96 -2.39 -0.02 0.55 16 44 H 0.39 -0.77 8.70 -74.05 -0.64 -1.41 16 45 H -0.30 -1.69 7.11 99.48 0.71 -0.99 16 46 H -0.27 -0.21 7.11 99.48 0.71 0.50 16 47 H 0.12 1.12 8.06 -2.91 -0.02 1.10 16 48 H 0.13 0.48 8.06 -2.91 -0.02 0.46 16 49 H 0.14 0.13 8.06 -2.91 -0.02 0.10 16 50 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 51 H 0.11 -1.86 8.14 -2.39 -0.02 -1.88 16 52 H 0.10 -1.56 6.86 -2.39 -0.02 -1.57 16 53 H 0.06 -0.28 7.80 -2.39 -0.02 -0.30 16 54 H 0.10 -1.04 8.11 -2.39 -0.02 -1.06 16 Total: 0.00 -36.00 445.68 2.62 -33.38 By element: Atomic # 1 Polarization: -23.48 SS G_CDS: -0.34 Total: -23.82 kcal Atomic # 6 Polarization: -4.29 SS G_CDS: 5.89 Total: 1.61 kcal Atomic # 7 Polarization: 6.11 SS G_CDS: -3.58 Total: 2.53 kcal Atomic # 8 Polarization: -12.92 SS G_CDS: -2.16 Total: -15.08 kcal Atomic # 9 Polarization: 0.44 SS G_CDS: 0.70 Total: 1.14 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: 2.11 Total: 0.25 kcal Total: -36.00 2.62 -33.38 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738318_9818708.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.985 kcal (2) G-P(sol) polarization free energy of solvation -36.001 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.364 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds