Wall clock time and date at job start Sun Mar 7 2021 05:26:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86294 * 109.47141 * 2 1 4 4 C 1.50702 * 109.46723 * 119.99778 * 2 1 3 5 5 C 1.37817 * 119.94173 * 15.23398 * 4 2 1 6 6 C 1.39673 * 119.87974 * 180.23240 * 5 4 2 7 7 C 1.47722 * 120.11706 * 179.79117 * 6 5 4 8 8 O 1.21565 * 120.00227 * 359.72173 * 7 6 5 9 9 N 1.34778 * 119.99656 * 179.72487 * 7 6 5 10 10 C 1.46507 * 119.99609 * 180.02562 * 9 7 6 11 11 H 1.08996 * 109.46955 * 324.99659 * 10 9 7 12 12 C 1.52996 * 109.47258 * 85.00044 * 10 9 7 13 13 C 1.52997 * 109.47131 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.46991 * 299.99311 * 13 12 10 15 15 H 1.08993 * 109.47839 * 300.00447 * 14 13 12 16 16 C 1.52997 * 109.46991 * 180.02562 * 14 13 12 17 17 F 1.39895 * 109.47059 * 65.00403 * 16 14 13 18 18 C 1.53006 * 109.46626 * 60.00378 * 14 13 12 19 19 C 1.52997 * 109.47127 * 299.99539 * 18 14 13 20 20 C 1.39634 * 119.75885 * 359.51645 * 6 5 4 21 21 C 1.37847 * 119.88320 * 0.25336 * 20 6 5 22 22 C 1.38638 * 120.11949 * 359.97438 * 21 20 6 23 23 F 1.35100 * 119.88100 * 180.02562 * 22 21 20 24 24 H 0.96702 * 113.99794 * 60.00525 * 1 2 3 25 25 H 1.08990 * 109.47550 * 239.99404 * 2 1 3 26 26 H 1.48503 * 109.99821 * 298.67844 * 3 2 1 27 27 H 1.48507 * 110.00249 * 59.99567 * 3 2 1 28 28 H 1.08004 * 120.06013 * 0.02562 * 5 4 2 29 29 H 0.97001 * 120.00320 * 359.97438 * 9 7 6 30 30 H 1.09001 * 109.46993 * 300.00050 * 12 10 9 31 31 H 1.09000 * 109.47380 * 59.99156 * 12 10 9 32 32 H 1.09002 * 109.47153 * 179.97438 * 13 12 10 33 33 H 1.08993 * 109.47194 * 60.00154 * 13 12 10 34 34 H 1.09002 * 109.47196 * 185.00356 * 16 14 13 35 35 H 1.09001 * 109.47630 * 305.00452 * 16 14 13 36 36 H 1.09001 * 109.46801 * 59.99811 * 18 14 13 37 37 H 1.09001 * 109.46998 * 179.97438 * 18 14 13 38 38 H 1.09002 * 109.47153 * 180.02562 * 19 18 14 39 39 H 1.08996 * 109.46952 * 300.00302 * 19 18 14 40 40 H 1.08001 * 120.05411 * 180.23518 * 20 6 5 41 41 H 1.08005 * 119.94091 * 179.97438 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0741 -1.4984 1.9679 6 6 1.5397 -2.1523 3.1109 7 6 0.6244 -2.9946 3.9077 8 8 -0.5377 -3.1154 3.5719 9 7 1.0776 -3.6289 5.0071 10 6 0.1699 -4.4647 5.7970 11 1 -0.8271 -4.0242 5.7912 12 6 0.1112 -5.8681 5.1906 13 6 -0.8363 -6.7410 6.0160 14 6 -0.3252 -6.8286 7.4554 15 1 0.6719 -7.2687 7.4609 16 6 -1.2723 -7.7020 8.2806 17 9 -1.2385 -9.0137 7.7955 18 6 -0.2664 -5.4250 8.0619 19 6 0.6810 -4.5521 7.2365 20 6 2.8750 -2.0116 3.4943 21 6 3.7250 -1.2248 2.7469 22 6 3.2564 -0.5742 1.6159 23 9 4.0937 0.1953 0.8866 24 1 -0.3933 0.4416 -0.7651 25 1 1.7924 -0.5139 -0.8898 26 1 1.5879 2.4584 -1.2243 27 1 1.5614 2.4679 1.2085 28 1 0.0434 -1.6074 1.6643 29 1 2.0050 -3.5327 5.2749 30 1 -0.2524 -5.8057 4.1649 31 1 1.1082 -6.3085 5.1964 32 1 -0.8785 -7.7407 5.5836 33 1 -1.8333 -6.3008 6.0104 34 1 -0.9586 -7.6925 9.3244 35 1 -2.2871 -7.3119 8.2026 36 1 -1.2636 -4.9849 8.0564 37 1 0.0973 -5.4874 9.0875 38 1 0.7232 -3.5524 7.6688 39 1 1.6781 -4.9924 7.2420 40 1 3.2411 -2.5182 4.3752 41 1 4.7579 -1.1150 3.0429 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:26:22 Heat of formation + Delta-G solvation = -147.371129 kcal Electronic energy + Delta-G solvation = -25669.752288 eV Core-core repulsion = 21572.261415 eV Total energy + Delta-G solvation = -4097.490874 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.132 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -50.28490 -48.56457 -41.56209 -40.10413 -39.04732 -37.81937 -35.72276 -33.21433 -32.26343 -31.81384 -31.19946 -27.24682 -26.62204 -24.77007 -23.80428 -23.22526 -22.33395 -21.49095 -20.86139 -19.16407 -18.82835 -18.35991 -17.69717 -17.14607 -16.95891 -16.77270 -16.67336 -16.49276 -16.19970 -16.06237 -16.00166 -15.28973 -15.08051 -15.03033 -14.86730 -14.37922 -14.31781 -14.16765 -14.10361 -13.52930 -13.26113 -13.19862 -13.15850 -12.92806 -12.53694 -12.47224 -12.14693 -11.93598 -11.75746 -11.57263 -11.45548 -11.27500 -11.10524 -10.99869 -10.24371 -9.99327 -9.69435 -4.85999 -0.50413 0.03422 1.15374 1.47463 1.61495 1.85314 1.99044 2.58517 2.85954 3.05844 3.41613 3.48147 3.56082 3.61462 3.70581 3.74277 3.90378 4.02205 4.03570 4.17046 4.23422 4.28740 4.30938 4.33845 4.40758 4.47647 4.50579 4.60258 4.74692 4.81831 4.83835 4.87104 4.91376 5.02282 5.06641 5.07237 5.11924 5.13763 5.18023 5.31707 5.37767 5.47554 5.62967 6.42829 6.47999 7.10047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.084 4.084 3 Si 0.742 3.258 4 C -0.133 4.133 5 C -0.033 4.033 6 C -0.159 4.159 7 C 0.557 3.443 8 O -0.581 6.581 9 N -0.705 5.705 10 C 0.145 3.855 11 H 0.065 0.935 12 C -0.123 4.123 13 C -0.113 4.113 14 C -0.115 4.115 15 H 0.088 0.912 16 C 0.055 3.945 17 F -0.239 7.239 18 C -0.107 4.107 19 C -0.117 4.117 20 C -0.046 4.046 21 C -0.140 4.140 22 C 0.118 3.882 23 F -0.099 7.099 24 H 0.399 0.601 25 H 0.104 0.896 26 H -0.272 1.272 27 H -0.301 1.301 28 H 0.125 0.875 29 H 0.417 0.583 30 H 0.041 0.959 31 H 0.078 0.922 32 H 0.060 0.940 33 H 0.060 0.940 34 H 0.095 0.905 35 H 0.081 0.919 36 H 0.067 0.933 37 H 0.092 0.908 38 H 0.083 0.917 39 H 0.089 0.911 40 H 0.177 0.823 41 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.747 0.720 3.727 8.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.192 4.192 3 Si 0.646 3.354 4 C -0.134 4.134 5 C -0.052 4.052 6 C -0.162 4.162 7 C 0.346 3.654 8 O -0.462 6.462 9 N -0.357 5.357 10 C 0.040 3.960 11 H 0.084 0.916 12 C -0.161 4.161 13 C -0.151 4.151 14 C -0.134 4.134 15 H 0.106 0.894 16 C 0.001 3.999 17 F -0.221 7.221 18 C -0.145 4.145 19 C -0.155 4.155 20 C -0.065 4.065 21 C -0.158 4.158 22 C 0.098 3.902 23 F -0.077 7.077 24 H 0.250 0.750 25 H 0.121 0.879 26 H -0.198 1.198 27 H -0.229 1.229 28 H 0.143 0.857 29 H 0.256 0.744 30 H 0.060 0.940 31 H 0.096 0.904 32 H 0.078 0.922 33 H 0.078 0.922 34 H 0.113 0.887 35 H 0.099 0.901 36 H 0.086 0.914 37 H 0.111 0.889 38 H 0.101 0.899 39 H 0.108 0.892 40 H 0.195 0.805 41 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 6.842 1.140 4.015 8.015 hybrid contribution -1.298 -0.062 -1.028 1.657 sum 5.544 1.079 2.987 6.389 Atomic orbital electron populations 1.86478 1.17915 1.81004 1.51282 1.24752 0.84788 1.11560 0.98071 0.94216 0.91607 0.72030 0.77554 1.19450 0.93153 1.01586 0.99184 1.20814 0.99967 0.92171 0.92287 1.20025 0.95611 1.02576 0.97978 1.18440 0.86860 0.79163 0.80955 1.90791 1.19957 1.64827 1.70609 1.45849 1.15182 1.48377 1.26295 1.21057 0.93836 0.89761 0.91322 0.91643 1.21829 1.00763 0.95002 0.98533 1.21514 0.98951 0.99619 0.95036 1.21774 1.00236 0.96830 0.94562 0.89378 1.22318 1.01921 0.76561 0.99142 1.92729 1.98054 1.40781 1.90510 1.21450 1.00504 0.92682 0.99897 1.21759 1.00550 1.01621 0.91593 1.21542 0.90082 0.95425 0.99407 1.21456 1.03321 0.97692 0.93317 1.17727 0.86425 0.93713 0.92345 1.91198 1.69316 1.71205 1.75976 0.74964 0.87868 1.19808 1.22886 0.85745 0.74438 0.93977 0.90350 0.92157 0.92160 0.88674 0.90094 0.91397 0.88931 0.89859 0.89199 0.80530 0.79736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.66 11.48 -148.98 -1.71 -4.37 16 2 C -0.08 -0.17 2.95 71.24 0.21 0.04 16 3 Si 0.74 1.05 29.57 68.60 2.03 3.08 16 4 C -0.13 -0.48 5.15 -19.86 -0.10 -0.58 16 5 C -0.03 -0.24 8.90 22.52 0.20 -0.04 16 6 C -0.16 -0.47 5.87 -20.09 -0.12 -0.58 16 7 C 0.56 3.48 7.73 86.75 0.67 4.15 16 8 O -0.58 -9.43 16.01 -3.92 -0.06 -9.49 16 9 N -0.71 1.40 5.03 -445.52 -2.24 -0.84 16 10 C 0.14 -0.16 2.46 44.99 0.11 -0.05 16 11 H 0.07 0.30 7.58 -2.39 -0.02 0.28 16 12 C -0.12 -0.07 5.49 30.59 0.17 0.10 16 13 C -0.11 -0.01 5.12 30.59 0.16 0.15 16 14 C -0.12 0.48 2.49 -10.79 -0.03 0.45 16 15 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 16 C 0.06 -0.16 6.91 71.98 0.50 0.34 16 17 F -0.24 -1.22 17.04 44.97 0.77 -0.45 16 18 C -0.11 0.79 5.20 30.60 0.16 0.95 16 19 C -0.12 0.89 5.39 30.59 0.16 1.05 16 20 C -0.05 0.27 9.54 22.51 0.21 0.48 16 21 C -0.14 0.87 10.01 22.27 0.22 1.09 16 22 C 0.12 -0.15 6.67 22.47 0.15 0.00 16 23 F -0.10 0.31 13.71 44.97 0.62 0.93 16 24 H 0.40 -1.43 8.74 -74.06 -0.65 -2.07 16 25 H 0.10 -0.21 7.96 -2.39 -0.02 -0.23 16 26 H -0.27 -1.14 7.11 99.48 0.71 -0.43 16 27 H -0.30 -2.91 7.11 99.48 0.71 -2.21 16 28 H 0.12 1.59 6.72 -2.91 -0.02 1.57 16 29 H 0.42 -4.07 6.63 -92.71 -0.61 -4.68 16 30 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.17 16 32 H 0.06 0.15 7.94 -2.39 -0.02 0.14 16 33 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 34 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 35 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 36 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 37 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 38 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 39 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 40 H 0.18 -2.52 6.40 -2.91 -0.02 -2.54 16 41 H 0.19 -2.41 8.06 -2.91 -0.02 -2.44 16 Total: 0.00 -22.53 338.38 1.92 -20.61 By element: Atomic # 1 Polarization: -16.85 SS G_CDS: -0.16 Total: -17.01 kcal Atomic # 6 Polarization: 4.86 SS G_CDS: 2.68 Total: 7.54 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -2.24 Total: -0.84 kcal Atomic # 8 Polarization: -12.09 SS G_CDS: -1.77 Total: -13.86 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 1.38 Total: 0.47 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: 2.03 Total: 3.08 kcal Total: -22.53 1.92 -20.61 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.758 kcal (2) G-P(sol) polarization free energy of solvation -22.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds