Wall clock time and date at job start Sun Mar 7 2021 05:27:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.34663 * 124.84972 * 2 1 4 4 C 1.36771 * 108.39563 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94061 * 180.02562 * 4 3 2 6 6 O 1.21626 * 120.00006 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99815 * 359.97438 * 5 4 3 8 8 C 1.46502 * 119.99670 * 179.97438 * 7 5 4 9 9 H 1.09000 * 109.47567 * 34.99784 * 8 7 5 10 10 C 1.52999 * 109.47075 * 154.99943 * 8 7 5 11 11 C 1.53009 * 109.47263 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.46809 * 300.00097 * 11 10 8 13 13 H 1.09002 * 109.47050 * 299.99465 * 12 11 10 14 14 C 1.53001 * 109.46826 * 179.97438 * 12 11 10 15 15 F 1.39902 * 109.47283 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47288 * 59.99918 * 12 11 10 17 17 C 1.53001 * 109.47071 * 299.99707 * 16 12 11 18 18 C 1.46685 * 106.11871 * 359.76262 * 4 3 2 19 19 C 1.34487 * 106.32965 * 0.39163 * 18 4 3 20 20 C 1.50706 * 125.57422 * 179.86739 * 19 18 4 21 21 O 1.42898 * 109.47264 * 209.69220 * 20 19 18 22 22 Si 1.86298 * 109.46730 * 329.69157 * 20 19 18 23 23 H 1.09002 * 109.47686 * 269.99959 * 1 2 3 24 24 H 1.08995 * 109.47675 * 29.99916 * 1 2 3 25 25 H 1.09006 * 109.47338 * 150.00199 * 1 2 3 26 26 H 1.07997 * 125.79945 * 359.96528 * 3 2 1 27 27 H 0.96996 * 120.00442 * 359.97438 * 7 5 4 28 28 H 1.09000 * 109.46991 * 299.99487 * 10 8 7 29 29 H 1.09002 * 109.47445 * 59.99886 * 10 8 7 30 30 H 1.09002 * 109.46878 * 59.99668 * 11 10 8 31 31 H 1.08999 * 109.46913 * 179.97438 * 11 10 8 32 32 H 1.08992 * 109.47379 * 300.00135 * 14 12 11 33 33 H 1.09007 * 109.47040 * 59.99704 * 14 12 11 34 34 H 1.09000 * 109.47053 * 60.00149 * 16 12 11 35 35 H 1.09000 * 109.46991 * 180.02562 * 16 12 11 36 36 H 1.09002 * 109.47053 * 300.00322 * 17 16 12 37 37 H 1.08995 * 109.46790 * 179.97438 * 17 16 12 38 38 H 1.07998 * 126.84183 * 180.25425 * 18 4 3 39 39 H 1.08998 * 109.46786 * 89.69078 * 20 19 18 40 40 H 0.96701 * 113.99831 * 179.97438 * 21 20 19 41 41 H 1.48500 * 110.00109 * 300.00012 * 22 20 19 42 42 H 1.48504 * 110.00355 * 61.32082 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 0.0006 5 6 4.7283 1.5959 0.0013 6 8 5.8446 1.1129 0.0023 7 7 4.5732 2.9346 0.0009 8 6 5.7493 3.8082 0.0022 9 1 6.5437 3.3490 -0.5861 10 6 5.3799 5.1617 -0.6080 11 6 6.6080 6.0743 -0.6061 12 6 7.0900 6.2776 0.8317 13 1 6.2954 6.7367 1.4198 14 6 8.3185 7.1896 0.8336 15 9 8.7590 7.3761 2.1483 16 6 7.4594 4.9241 1.4420 17 6 6.2313 4.0116 1.4401 18 6 3.5375 -0.7491 0.0068 19 6 2.2447 -1.1197 0.0006 20 6 1.7397 -2.5396 0.0008 21 8 0.4810 -2.5976 -0.6733 22 14 2.9651 -3.6345 -0.8768 23 1 -0.3634 0.0000 1.0276 24 1 -0.3634 0.8899 -0.5138 25 1 -0.3634 -0.8900 -0.5138 26 1 1.8766 2.1241 -0.0005 27 1 3.6830 3.3198 -0.0002 28 1 5.0361 5.0168 -1.6322 29 1 4.5855 5.6210 -0.0196 30 1 7.4027 5.6153 -1.1942 31 1 6.3449 7.0384 -1.0413 32 1 9.1130 6.7303 0.2456 33 1 8.0557 8.1540 0.3986 34 1 8.2541 4.4651 0.8539 35 1 7.8024 5.0689 2.4664 36 1 5.4367 4.4706 2.0282 37 1 6.4947 3.0472 1.8744 38 1 4.3980 -1.4017 0.0127 39 1 1.6177 -2.8816 1.0285 40 1 0.0959 -3.4838 -0.7117 41 1 3.1405 -3.1786 -2.2792 42 1 4.2694 -3.6079 -0.1673 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_13287730.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:27:01 Heat of formation + Delta-G solvation = -82.300001 kcal Electronic energy + Delta-G solvation = -24113.802172 eV Core-core repulsion = 20395.849581 eV Total energy + Delta-G solvation = -3717.952592 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.47884 -42.44319 -40.67579 -38.95328 -37.84896 -35.38113 -33.81100 -32.24049 -31.83952 -31.02410 -27.79561 -26.70709 -25.90062 -23.93559 -23.58420 -22.12712 -21.24854 -20.83879 -20.17492 -18.64281 -18.47112 -17.18872 -17.06838 -16.80496 -16.65574 -16.57474 -16.27895 -15.85944 -15.58376 -15.47714 -15.04554 -14.89914 -14.80757 -14.53848 -14.27440 -13.70403 -13.50747 -13.43840 -13.32528 -13.27436 -13.07681 -13.00634 -12.64075 -12.51619 -12.19713 -11.87403 -11.77732 -11.56606 -11.44951 -11.19301 -10.75293 -10.66905 -9.94479 -9.56671 -9.19632 -5.02427 0.77310 1.01856 1.41806 1.69822 1.91081 2.08648 2.29964 2.70342 3.01116 3.43767 3.52895 3.58272 3.65184 3.78730 3.82895 3.86698 4.02492 4.16100 4.19415 4.22359 4.24656 4.31159 4.32178 4.38938 4.41181 4.45482 4.51004 4.68945 4.73100 4.78983 4.83182 4.92493 4.95830 4.99193 5.06056 5.11206 5.23123 5.33028 5.40219 5.60156 5.69929 5.97891 6.14375 6.38083 6.69040 7.49382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.420 5.420 3 C 0.051 3.949 4 C -0.227 4.227 5 C 0.592 3.408 6 O -0.542 6.542 7 N -0.729 5.729 8 C 0.146 3.854 9 H 0.089 0.911 10 C -0.125 4.125 11 C -0.109 4.109 12 C -0.122 4.122 13 H 0.083 0.917 14 C 0.064 3.936 15 F -0.217 7.217 16 C -0.113 4.113 17 C -0.128 4.128 18 C -0.145 4.145 19 C 0.027 3.973 20 C -0.046 4.046 21 O -0.552 6.552 22 Si 0.708 3.292 23 H 0.072 0.928 24 H 0.080 0.920 25 H 0.118 0.882 26 H 0.172 0.828 27 H 0.396 0.604 28 H 0.072 0.928 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.068 0.932 35 H 0.072 0.928 36 H 0.064 0.936 37 H 0.071 0.929 38 H 0.149 0.851 39 H 0.080 0.920 40 H 0.387 0.613 41 H -0.252 1.252 42 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.285 -1.042 -1.167 7.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.094 5.094 3 C -0.086 4.086 4 C -0.237 4.237 5 C 0.381 3.619 6 O -0.420 6.420 7 N -0.380 5.380 8 C 0.042 3.958 9 H 0.108 0.892 10 C -0.163 4.163 11 C -0.148 4.148 12 C -0.141 4.141 13 H 0.101 0.899 14 C 0.009 3.991 15 F -0.198 7.198 16 C -0.151 4.151 17 C -0.166 4.166 18 C -0.169 4.169 19 C -0.082 4.082 20 C -0.155 4.155 21 O -0.360 6.360 22 Si 0.607 3.393 23 H 0.091 0.909 24 H 0.099 0.901 25 H 0.136 0.864 26 H 0.189 0.811 27 H 0.230 0.770 28 H 0.091 0.909 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.093 0.907 33 H 0.093 0.907 34 H 0.086 0.914 35 H 0.091 0.909 36 H 0.083 0.917 37 H 0.089 0.911 38 H 0.167 0.833 39 H 0.097 0.903 40 H 0.237 0.763 41 H -0.176 1.176 42 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -5.962 -0.826 -1.625 6.235 hybrid contribution -0.674 0.920 0.462 1.231 sum -6.636 0.095 -1.164 6.738 Atomic orbital electron populations 1.22516 0.75984 1.06170 1.03791 1.43488 1.07273 1.04710 1.53961 1.21938 0.90079 0.91867 1.04697 1.20269 0.91686 0.93611 1.18120 1.17359 0.87976 0.81329 0.75216 1.90782 1.25811 1.75192 1.50167 1.45886 1.09580 1.05722 1.76767 1.20989 0.88331 0.89638 0.96842 0.89250 1.21777 0.98522 0.94411 1.01549 1.21440 0.97772 0.99971 0.95570 1.21832 0.97798 0.96636 0.97845 0.89868 1.22062 0.96937 1.00586 0.79504 1.92772 1.91078 1.96706 1.39288 1.21535 0.97887 0.93874 1.01851 1.21907 0.97839 1.00378 0.96518 1.21597 0.94595 0.93522 1.07234 1.19776 0.90121 0.87198 1.11146 1.24415 0.93805 0.95815 1.01512 1.86293 1.34986 1.35340 1.79341 0.95674 0.78238 0.85565 0.79824 0.90946 0.90132 0.86368 0.81077 0.77022 0.90896 0.91208 0.91068 0.90896 0.90682 0.90730 0.91375 0.90912 0.91734 0.91059 0.83304 0.90264 0.76348 1.17649 1.17625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.71 59.84 0.64 0.54 16 2 N -0.42 -0.54 3.09 -119.90 -0.37 -0.91 16 3 C 0.05 0.05 10.83 -16.84 -0.18 -0.13 16 4 C -0.23 -0.90 6.29 -103.35 -0.65 -1.55 16 5 C 0.59 2.90 7.77 -12.59 -0.10 2.80 16 6 O -0.54 -4.85 16.63 5.25 0.09 -4.76 16 7 N -0.73 -0.79 5.07 -54.93 -0.28 -1.07 16 8 C 0.15 0.12 2.46 -67.93 -0.17 -0.05 16 9 H 0.09 0.27 7.58 -51.93 -0.39 -0.13 16 10 C -0.12 0.21 5.39 -26.73 -0.14 0.07 16 11 C -0.11 0.22 5.20 -26.73 -0.14 0.08 16 12 C -0.12 0.11 2.52 -90.62 -0.23 -0.12 16 13 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 14 C 0.06 -0.04 6.96 37.16 0.26 0.22 16 15 F -0.22 -0.64 16.84 2.25 0.04 -0.60 16 16 C -0.11 -0.06 5.08 -26.73 -0.14 -0.20 16 17 C -0.13 -0.15 5.49 -26.73 -0.15 -0.30 16 18 C -0.15 -0.68 9.50 -37.50 -0.36 -1.03 16 19 C 0.03 0.07 6.17 -81.86 -0.50 -0.43 16 20 C -0.05 0.03 2.97 36.01 0.11 0.14 16 21 O -0.55 1.19 9.69 -35.23 -0.34 0.85 16 22 Si 0.71 -0.62 31.24 -169.99 -5.31 -5.93 16 23 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 24 H 0.08 -0.27 8.13 -51.93 -0.42 -0.70 16 25 H 0.12 -0.17 5.13 -51.93 -0.27 -0.44 16 26 H 0.17 -0.51 7.45 -52.49 -0.39 -0.90 16 27 H 0.40 -0.73 7.55 -40.82 -0.31 -1.04 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 29 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.07 0.10 7.80 -51.93 -0.41 -0.30 16 36 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 38 H 0.15 0.78 6.75 -52.49 -0.35 0.42 16 39 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 40 H 0.39 -2.71 8.74 45.56 0.40 -2.31 16 41 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 42 H -0.25 -0.55 6.89 56.52 0.39 -0.16 16 LS Contribution 340.53 15.07 5.13 5.13 Total: 0.00 -10.06 340.53 -9.20 -19.26 By element: Atomic # 1 Polarization: -5.59 SS G_CDS: -6.42 Total: -12.00 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -1.75 Total: 0.04 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.65 Total: -1.98 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -0.25 Total: -3.92 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.04 Total: -0.60 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.31 Total: -5.93 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -10.06 -9.20 -19.26 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_13287730.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.036 kcal (2) G-P(sol) polarization free energy of solvation -10.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds