Wall clock time and date at job start Sun Mar 7 2021 05:27:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.34663 * 124.84972 * 2 1 4 4 C 1.36771 * 108.39563 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94061 * 180.02562 * 4 3 2 6 6 O 1.21626 * 120.00006 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99815 * 359.97438 * 5 4 3 8 8 C 1.46502 * 119.99670 * 179.97438 * 7 5 4 9 9 H 1.09000 * 109.47567 * 34.99784 * 8 7 5 10 10 C 1.52999 * 109.47075 * 154.99943 * 8 7 5 11 11 C 1.53009 * 109.47263 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.46809 * 300.00097 * 11 10 8 13 13 H 1.09002 * 109.47050 * 299.99465 * 12 11 10 14 14 C 1.53001 * 109.46826 * 179.97438 * 12 11 10 15 15 F 1.39902 * 109.47283 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47288 * 59.99918 * 12 11 10 17 17 C 1.53001 * 109.47071 * 299.99707 * 16 12 11 18 18 C 1.46685 * 106.11871 * 359.76262 * 4 3 2 19 19 C 1.34487 * 106.32965 * 0.39163 * 18 4 3 20 20 C 1.50706 * 125.57422 * 179.86739 * 19 18 4 21 21 O 1.42898 * 109.47264 * 209.69220 * 20 19 18 22 22 Si 1.86298 * 109.46730 * 329.69157 * 20 19 18 23 23 H 1.09002 * 109.47686 * 269.99959 * 1 2 3 24 24 H 1.08995 * 109.47675 * 29.99916 * 1 2 3 25 25 H 1.09006 * 109.47338 * 150.00199 * 1 2 3 26 26 H 1.07997 * 125.79945 * 359.96528 * 3 2 1 27 27 H 0.96996 * 120.00442 * 359.97438 * 7 5 4 28 28 H 1.09000 * 109.46991 * 299.99487 * 10 8 7 29 29 H 1.09002 * 109.47445 * 59.99886 * 10 8 7 30 30 H 1.09002 * 109.46878 * 59.99668 * 11 10 8 31 31 H 1.08999 * 109.46913 * 179.97438 * 11 10 8 32 32 H 1.08992 * 109.47379 * 300.00135 * 14 12 11 33 33 H 1.09007 * 109.47040 * 59.99704 * 14 12 11 34 34 H 1.09000 * 109.47053 * 60.00149 * 16 12 11 35 35 H 1.09000 * 109.46991 * 180.02562 * 16 12 11 36 36 H 1.09002 * 109.47053 * 300.00322 * 17 16 12 37 37 H 1.08995 * 109.46790 * 179.97438 * 17 16 12 38 38 H 1.07998 * 126.84183 * 180.25425 * 18 4 3 39 39 H 1.08998 * 109.46786 * 89.69078 * 20 19 18 40 40 H 0.96701 * 113.99831 * 179.97438 * 21 20 19 41 41 H 1.48500 * 110.00109 * 300.00012 * 22 20 19 42 42 H 1.48504 * 110.00355 * 61.32082 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 0.0006 5 6 4.7283 1.5959 0.0013 6 8 5.8446 1.1129 0.0023 7 7 4.5732 2.9346 0.0009 8 6 5.7493 3.8082 0.0022 9 1 6.5437 3.3490 -0.5861 10 6 5.3799 5.1617 -0.6080 11 6 6.6080 6.0743 -0.6061 12 6 7.0900 6.2776 0.8317 13 1 6.2954 6.7367 1.4198 14 6 8.3185 7.1896 0.8336 15 9 8.7590 7.3761 2.1483 16 6 7.4594 4.9241 1.4420 17 6 6.2313 4.0116 1.4401 18 6 3.5375 -0.7491 0.0068 19 6 2.2447 -1.1197 0.0006 20 6 1.7397 -2.5396 0.0008 21 8 0.4810 -2.5976 -0.6733 22 14 2.9651 -3.6345 -0.8768 23 1 -0.3634 0.0000 1.0276 24 1 -0.3634 0.8899 -0.5138 25 1 -0.3634 -0.8900 -0.5138 26 1 1.8766 2.1241 -0.0005 27 1 3.6830 3.3198 -0.0002 28 1 5.0361 5.0168 -1.6322 29 1 4.5855 5.6210 -0.0196 30 1 7.4027 5.6153 -1.1942 31 1 6.3449 7.0384 -1.0413 32 1 9.1130 6.7303 0.2456 33 1 8.0557 8.1540 0.3986 34 1 8.2541 4.4651 0.8539 35 1 7.8024 5.0689 2.4664 36 1 5.4367 4.4706 2.0282 37 1 6.4947 3.0472 1.8744 38 1 4.3980 -1.4017 0.0127 39 1 1.6177 -2.8816 1.0285 40 1 0.0959 -3.4838 -0.7117 41 1 3.1405 -3.1786 -2.2792 42 1 4.2694 -3.6079 -0.1673 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_13287730.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:27:00 Heat of formation + Delta-G solvation = -82.791388 kcal Electronic energy + Delta-G solvation = -24113.823480 eV Core-core repulsion = 20395.849581 eV Total energy + Delta-G solvation = -3717.973900 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.58008 -42.56178 -40.86248 -39.12189 -37.71198 -35.59890 -33.88005 -32.33813 -31.83716 -31.07047 -27.79018 -26.72696 -25.91223 -24.03730 -23.62084 -22.18699 -21.39524 -20.91947 -20.28074 -18.68979 -18.35253 -17.33273 -17.17677 -16.86661 -16.69292 -16.63243 -16.33605 -15.96949 -15.61740 -15.50120 -15.07272 -15.01054 -14.95092 -14.72462 -14.35881 -13.81449 -13.50882 -13.44743 -13.35121 -13.22295 -13.16421 -13.06861 -12.66632 -12.56450 -12.17813 -11.98939 -11.77354 -11.57897 -11.46852 -11.28002 -11.01400 -10.64470 -10.19508 -9.71905 -9.30993 -5.05010 0.60539 0.90372 1.34934 1.63304 1.88239 2.05189 2.16456 2.40696 3.14475 3.48367 3.54473 3.61068 3.66381 3.78566 3.84378 3.90697 4.00994 4.21496 4.23270 4.27956 4.29511 4.32369 4.38335 4.39938 4.45409 4.48388 4.51260 4.65751 4.73446 4.77706 4.82576 4.86677 5.02645 5.03623 5.06790 5.10891 5.15318 5.30114 5.38660 5.43625 5.51330 5.84025 6.13601 6.55394 6.82228 7.23724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.421 5.421 3 C 0.075 3.925 4 C -0.263 4.263 5 C 0.587 3.413 6 O -0.599 6.599 7 N -0.710 5.710 8 C 0.146 3.854 9 H 0.061 0.939 10 C -0.116 4.116 11 C -0.107 4.107 12 C -0.115 4.115 13 H 0.089 0.911 14 C 0.056 3.944 15 F -0.239 7.239 16 C -0.112 4.112 17 C -0.122 4.122 18 C -0.189 4.189 19 C 0.022 3.978 20 C -0.040 4.040 21 O -0.555 6.555 22 Si 0.802 3.198 23 H 0.085 0.915 24 H 0.103 0.897 25 H 0.117 0.883 26 H 0.216 0.784 27 H 0.414 0.586 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.066 0.934 31 H 0.094 0.906 32 H 0.081 0.919 33 H 0.096 0.904 34 H 0.058 0.942 35 H 0.061 0.939 36 H 0.077 0.923 37 H 0.038 0.962 38 H 0.124 0.876 39 H 0.104 0.896 40 H 0.410 0.590 41 H -0.311 1.311 42 H -0.304 1.304 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.449 0.517 -1.357 10.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.094 5.094 3 C -0.062 4.062 4 C -0.273 4.273 5 C 0.377 3.623 6 O -0.481 6.481 7 N -0.361 5.361 8 C 0.041 3.959 9 H 0.079 0.921 10 C -0.154 4.154 11 C -0.145 4.145 12 C -0.134 4.134 13 H 0.107 0.893 14 C 0.002 3.998 15 F -0.220 7.220 16 C -0.151 4.151 17 C -0.160 4.160 18 C -0.213 4.213 19 C -0.089 4.089 20 C -0.150 4.150 21 O -0.367 6.367 22 Si 0.709 3.291 23 H 0.104 0.896 24 H 0.121 0.879 25 H 0.135 0.865 26 H 0.233 0.767 27 H 0.251 0.749 28 H 0.099 0.901 29 H 0.107 0.893 30 H 0.085 0.915 31 H 0.112 0.888 32 H 0.100 0.900 33 H 0.115 0.885 34 H 0.077 0.923 35 H 0.079 0.921 36 H 0.095 0.905 37 H 0.057 0.943 38 H 0.142 0.858 39 H 0.122 0.878 40 H 0.264 0.736 41 H -0.239 1.239 42 H -0.232 1.232 Dipole moment (debyes) X Y Z Total from point charges -9.209 0.732 -1.806 9.413 hybrid contribution 0.334 0.419 0.477 0.717 sum -8.875 1.150 -1.329 9.047 Atomic orbital electron populations 1.22765 0.73702 1.07336 1.05014 1.43812 1.08595 1.04207 1.52770 1.22494 0.88685 0.93540 1.01498 1.20320 0.92848 0.93241 1.20918 1.17666 0.87573 0.82507 0.74530 1.90741 1.27908 1.76346 1.53141 1.45726 1.10700 1.04505 1.75130 1.21010 0.87666 0.90873 0.96311 0.92089 1.21746 0.99211 0.92411 1.02002 1.21449 0.97492 1.00868 0.94665 1.21771 0.97872 0.95155 0.98568 0.89312 1.22307 0.97263 1.01872 0.78403 1.92728 1.91386 1.96859 1.41059 1.21503 0.97330 0.94987 1.01242 1.21823 0.98506 0.98909 0.96784 1.21628 0.95240 0.94374 1.10090 1.20147 0.89712 0.89166 1.09842 1.24301 0.94337 0.93496 1.02861 1.86242 1.33802 1.37606 1.79070 0.94935 0.75736 0.83671 0.74777 0.89618 0.87851 0.86471 0.76738 0.74903 0.90082 0.89293 0.91475 0.88756 0.90047 0.88549 0.92307 0.92070 0.90475 0.94345 0.85834 0.87791 0.73602 1.23908 1.23206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.32 10.71 127.77 1.37 1.05 16 2 N -0.42 -0.54 3.09 -533.24 -1.65 -2.19 16 3 C 0.08 0.06 10.83 83.91 0.91 0.96 16 4 C -0.26 -2.53 6.29 -19.04 -0.12 -2.65 16 5 C 0.59 7.27 7.77 86.62 0.67 7.95 16 6 O -0.60 -13.51 16.63 -4.11 -0.07 -13.58 16 7 N -0.71 -2.04 5.07 -445.95 -2.26 -4.30 16 8 C 0.15 0.40 2.46 44.99 0.11 0.51 16 9 H 0.06 0.54 7.58 -2.39 -0.02 0.52 16 10 C -0.12 0.54 5.39 30.60 0.16 0.70 16 11 C -0.11 0.55 5.20 30.60 0.16 0.71 16 12 C -0.11 0.26 2.52 -10.79 -0.03 0.23 16 13 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 14 C 0.06 -0.09 6.96 71.98 0.50 0.42 16 15 F -0.24 -1.51 16.84 44.97 0.76 -0.75 16 16 C -0.11 -0.30 5.08 30.59 0.16 -0.14 16 17 C -0.12 -0.49 5.49 30.60 0.17 -0.32 16 18 C -0.19 -2.32 9.50 23.62 0.22 -2.10 16 19 C 0.02 0.12 6.17 40.98 0.25 0.38 16 20 C -0.04 0.07 2.97 71.24 0.21 0.28 16 21 O -0.56 3.41 9.69 -148.98 -1.44 1.97 16 22 Si 0.80 0.03 31.24 68.60 2.14 2.17 16 23 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 24 H 0.10 -1.09 8.13 -2.39 -0.02 -1.11 16 25 H 0.12 -0.65 5.13 -2.38 -0.01 -0.66 16 26 H 0.22 -2.02 7.45 -2.91 -0.02 -2.04 16 27 H 0.41 -2.06 7.55 -92.71 -0.70 -2.76 16 28 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 29 H 0.09 -0.70 8.14 -2.39 -0.02 -0.71 16 30 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 32 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.10 -0.55 8.14 -2.38 -0.02 -0.57 16 34 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 35 H 0.06 0.30 7.80 -2.39 -0.02 0.28 16 36 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.04 0.41 8.14 -2.39 -0.02 0.39 16 38 H 0.12 1.97 6.75 -2.91 -0.02 1.95 16 39 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 40 H 0.41 -6.76 8.74 -74.06 -0.65 -7.41 16 41 H -0.31 -3.01 7.11 99.48 0.71 -2.30 16 42 H -0.30 -2.57 6.89 99.48 0.69 -1.88 16 Total: 0.00 -30.11 340.53 1.94 -28.17 By element: Atomic # 1 Polarization: -19.18 SS G_CDS: -0.30 Total: -19.48 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 4.75 Total: 7.98 kcal Atomic # 7 Polarization: -2.58 SS G_CDS: -3.90 Total: -6.49 kcal Atomic # 8 Polarization: -10.10 SS G_CDS: -1.51 Total: -11.61 kcal Atomic # 9 Polarization: -1.51 SS G_CDS: 0.76 Total: -0.75 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: 2.14 Total: 2.17 kcal Total: -30.11 1.94 -28.17 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_13287730.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.621 kcal (2) G-P(sol) polarization free energy of solvation -30.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds