Wall clock time and date at job start Sun Mar 7 2021 05:27:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37783 * 119.84787 * 2 1 4 4 C 1.39713 * 119.90511 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.18757 * 179.97438 * 4 3 2 6 6 O 1.21592 * 119.99539 * 180.02562 * 5 4 3 7 7 N 1.34770 * 120.00312 * 359.97438 * 5 4 3 8 8 C 1.46500 * 120.00256 * 180.02562 * 7 5 4 9 9 H 1.08998 * 109.46845 * 325.00694 * 8 7 5 10 10 C 1.53006 * 109.47249 * 84.99846 * 8 7 5 11 11 C 1.52997 * 109.47164 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46978 * 299.99874 * 11 10 8 13 13 H 1.08992 * 109.47056 * 300.00064 * 12 11 10 14 14 C 1.52997 * 109.46978 * 180.02562 * 12 11 10 15 15 F 1.39903 * 109.47485 * 179.97438 * 14 12 11 16 16 C 1.52996 * 109.46891 * 60.00410 * 12 11 10 17 17 C 1.52997 * 109.47473 * 205.00145 * 8 7 5 18 18 C 1.40132 * 119.61630 * 0.25438 * 4 3 2 19 19 O 1.35656 * 120.14952 * 179.72104 * 18 4 3 20 20 C 1.38714 * 119.69905 * 359.51293 * 18 4 3 21 21 C 1.50705 * 119.95380 * 180.20615 * 20 18 4 22 22 O 1.42900 * 109.47402 * 285.27914 * 21 20 18 23 23 Si 1.86300 * 109.46540 * 165.28052 * 21 20 18 24 24 C 1.38047 * 120.08360 * 0.48915 * 20 18 4 25 25 H 1.09002 * 109.47264 * 90.00154 * 1 2 3 26 26 H 1.09004 * 109.47393 * 209.99871 * 1 2 3 27 27 H 1.09002 * 109.47199 * 330.00090 * 1 2 3 28 28 H 1.07998 * 120.04739 * 0.02562 * 3 2 1 29 29 H 0.97005 * 120.00370 * 0.02562 * 7 5 4 30 30 H 1.09001 * 109.47002 * 60.00085 * 10 8 7 31 31 H 1.09000 * 109.47050 * 300.00351 * 10 8 7 32 32 H 1.09002 * 109.47045 * 180.02562 * 11 10 8 33 33 H 1.09001 * 109.47375 * 59.99966 * 11 10 8 34 34 H 1.09001 * 109.47375 * 300.00092 * 14 12 11 35 35 H 1.09002 * 109.47045 * 60.00167 * 14 12 11 36 36 H 1.09004 * 109.47368 * 179.97438 * 16 12 11 37 37 H 1.09001 * 109.47372 * 59.99964 * 16 12 11 38 38 H 1.09002 * 109.47153 * 59.99757 * 17 8 7 39 39 H 1.09001 * 109.46832 * 299.99948 * 17 8 7 40 40 H 0.96701 * 113.99652 * 90.00316 * 19 18 4 41 41 H 1.08995 * 109.46951 * 45.28302 * 21 20 18 42 42 H 0.96698 * 114.00024 * 300.00020 * 22 21 20 43 43 H 1.48508 * 110.00036 * 180.02562 * 23 21 20 44 44 H 1.48502 * 110.00327 * 301.31708 * 23 21 20 45 45 H 1.08007 * 119.80105 * 179.76392 * 24 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1965 0.0005 5 6 4.3305 2.4725 0.0000 6 8 5.5464 2.4696 0.0000 7 7 3.6593 3.6412 -0.0016 8 6 4.3947 4.9082 -0.0027 9 1 5.3050 4.8005 0.5871 10 6 4.7601 5.2846 -1.4401 11 6 5.5287 6.6075 -1.4412 12 6 4.6542 7.7059 -0.8329 13 1 3.7440 7.8139 -1.4227 14 6 5.4225 9.0289 -0.8346 15 9 4.6228 10.0334 -0.2790 16 6 4.2889 7.3295 0.6043 17 6 3.5199 6.0063 0.6053 18 6 4.2836 -0.0211 -0.0043 19 8 5.6401 -0.0323 -0.0096 20 6 3.5770 -1.2147 0.0006 21 6 4.3173 -2.5274 0.0001 22 8 4.8554 -2.7704 -1.3012 23 14 3.1442 -3.9019 0.4535 24 6 2.1966 -1.2017 0.0001 25 1 -0.3634 0.0000 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.6511 2.1294 0.0004 29 1 2.6893 3.6435 -0.0020 30 1 3.8499 5.3923 -2.0300 31 1 5.3834 4.5023 -1.8732 32 1 5.7885 6.8759 -2.4652 33 1 6.4389 6.4995 -0.8513 34 1 6.3330 8.9212 -0.2450 35 1 5.6824 9.2968 -1.8587 36 1 3.6663 8.1121 1.0379 37 1 5.1992 7.2214 1.1942 38 1 3.2596 5.7381 1.6293 39 1 2.6097 6.1140 0.0154 40 1 6.0368 -0.0372 0.8723 41 1 5.1284 -2.4874 0.7271 42 1 4.1887 -2.8186 -1.9998 43 1 3.8621 -5.2019 0.4572 44 1 2.5534 -3.6448 1.7915 45 1 1.6509 -2.1338 0.0001 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_13422088.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:27:22 Heat of formation + Delta-G solvation = -151.997153 kcal Electronic energy + Delta-G solvation = -27885.211013 eV Core-core repulsion = 23782.753704 eV Total energy + Delta-G solvation = -4102.457308 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.52306 -41.78754 -40.54026 -39.05604 -38.01857 -37.56607 -35.51559 -33.24790 -33.10010 -31.92745 -31.32491 -27.70227 -26.94340 -26.75351 -24.80242 -23.88056 -22.47291 -21.99135 -21.42659 -20.88943 -19.58412 -18.38004 -18.09213 -17.46474 -16.98980 -16.87329 -16.76806 -16.68267 -16.35361 -16.04023 -15.86187 -15.49848 -15.17026 -15.10326 -14.91203 -14.71055 -14.64478 -14.38672 -14.17713 -13.77684 -13.53939 -13.43806 -13.27680 -13.20461 -13.07617 -12.63344 -12.48412 -12.25409 -12.17134 -12.05856 -11.96166 -11.70405 -11.59623 -11.41119 -11.30132 -10.78844 -10.37502 -10.21622 -10.01376 -9.56204 -5.11863 -0.36535 0.01877 1.20556 1.56907 1.76529 1.90667 2.06514 2.57129 3.15236 3.33825 3.39744 3.46169 3.48831 3.52601 3.60274 3.66534 3.83640 3.93859 4.01139 4.05672 4.08766 4.19897 4.23577 4.26084 4.34255 4.37488 4.37979 4.42190 4.50670 4.54546 4.65896 4.67243 4.74657 4.76479 4.87844 4.92630 4.94879 5.01764 5.04767 5.08457 5.13543 5.25037 5.26488 5.31530 5.47361 5.54099 6.45980 6.58816 6.73728 7.23712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.068 4.068 4 C -0.164 4.164 5 C 0.560 3.440 6 O -0.516 6.516 7 N -0.726 5.726 8 C 0.146 3.854 9 H 0.090 0.910 10 C -0.128 4.128 11 C -0.111 4.111 12 C -0.122 4.122 13 H 0.083 0.917 14 C 0.064 3.936 15 F -0.218 7.218 16 C -0.112 4.112 17 C -0.125 4.125 18 C 0.190 3.810 19 O -0.467 6.467 20 C -0.154 4.154 21 C -0.058 4.058 22 O -0.530 6.530 23 Si 0.683 3.317 24 C -0.073 4.073 25 H 0.077 0.923 26 H 0.072 0.928 27 H 0.070 0.930 28 H 0.131 0.869 29 H 0.398 0.602 30 H 0.065 0.935 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.068 0.932 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.393 0.607 41 H 0.111 0.889 42 H 0.377 0.623 43 H -0.251 1.251 44 H -0.255 1.255 45 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.507 -0.277 -0.205 6.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.347 3.653 6 O -0.392 6.392 7 N -0.378 5.378 8 C 0.042 3.958 9 H 0.108 0.892 10 C -0.167 4.167 11 C -0.149 4.149 12 C -0.141 4.141 13 H 0.102 0.898 14 C 0.009 3.991 15 F -0.199 7.199 16 C -0.150 4.150 17 C -0.163 4.163 18 C 0.143 3.857 19 O -0.277 6.277 20 C -0.155 4.155 21 C -0.169 4.169 22 O -0.335 6.335 23 Si 0.584 3.416 24 C -0.091 4.091 25 H 0.096 0.904 26 H 0.091 0.909 27 H 0.089 0.911 28 H 0.149 0.851 29 H 0.233 0.767 30 H 0.084 0.916 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.094 0.906 37 H 0.087 0.913 38 H 0.090 0.910 39 H 0.088 0.912 40 H 0.251 0.749 41 H 0.129 0.871 42 H 0.223 0.777 43 H -0.176 1.176 44 H -0.180 1.180 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -5.298 -0.892 0.125 5.374 hybrid contribution -0.038 0.561 0.644 0.854 sum -5.336 -0.332 0.769 5.401 Atomic orbital electron populations 1.20844 0.89926 1.03512 1.03086 1.19802 0.96822 0.92248 1.00859 1.21129 0.92129 0.98300 0.97089 1.20414 0.93968 0.93530 1.08898 1.18029 0.87336 0.83330 0.76617 1.90837 1.12966 1.87253 1.48178 1.46000 1.10195 1.05498 1.76138 1.21026 0.95942 0.81900 0.96936 0.89179 1.21895 1.00842 0.97407 0.96519 1.21460 0.98423 0.93532 1.01459 1.21830 0.99987 0.94321 0.97967 0.89829 1.22068 0.92906 0.84851 0.99310 1.92771 1.76431 1.63003 1.87680 1.21520 1.00955 0.96648 0.95890 1.21802 0.98719 0.94287 1.01517 1.18236 0.83966 0.89707 0.93835 1.84813 1.14051 1.95874 1.32970 1.20747 0.94081 0.95915 1.04756 1.24941 1.03763 0.98626 0.89595 1.86584 1.36934 1.94153 1.15826 0.94989 0.83485 0.77743 0.85399 1.20976 0.92565 0.97948 0.97603 0.90441 0.90912 0.91105 0.85126 0.76714 0.91586 0.90931 0.91052 0.91140 0.90658 0.90644 0.90603 0.91279 0.90954 0.91169 0.74888 0.87127 0.77651 1.17610 1.17983 0.84604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.47 10.00 36.01 0.36 0.83 16 2 C -0.10 0.18 5.87 -104.67 -0.61 -0.43 16 3 C -0.07 0.09 9.18 -39.20 -0.36 -0.27 16 4 C -0.16 -0.24 5.89 -104.85 -0.62 -0.86 16 5 C 0.56 1.51 7.73 -12.47 -0.10 1.42 16 6 O -0.52 -3.26 14.82 -16.59 -0.25 -3.51 16 7 N -0.73 0.28 5.03 -54.85 -0.28 0.00 16 8 C 0.15 -0.05 2.45 -67.93 -0.17 -0.22 16 9 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 10 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 11 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 12 C -0.12 0.19 2.51 -90.62 -0.23 -0.04 16 13 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 14 C 0.06 -0.07 6.96 37.16 0.26 0.19 16 15 F -0.22 -0.46 16.84 2.25 0.04 -0.42 16 16 C -0.11 0.17 5.08 -26.71 -0.14 0.03 16 17 C -0.13 0.26 5.39 -26.71 -0.14 0.11 16 18 C 0.19 0.44 6.69 -38.70 -0.26 0.18 16 19 O -0.47 -1.74 10.91 -40.55 -0.44 -2.19 16 20 C -0.15 -0.06 5.27 -104.51 -0.55 -0.61 16 21 C -0.06 -0.01 2.37 36.01 0.09 0.07 16 22 O -0.53 -0.79 12.88 -35.23 -0.45 -1.24 16 23 Si 0.68 -0.94 29.91 -169.99 -5.08 -6.02 16 24 C -0.07 0.11 8.30 -39.54 -0.33 -0.22 16 25 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 26 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 27 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 28 H 0.13 -0.52 6.40 -52.49 -0.34 -0.85 16 29 H 0.40 -1.19 6.63 -40.82 -0.27 -1.46 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.08 -0.07 7.80 -51.93 -0.41 -0.47 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.39 0.14 9.06 45.56 0.41 0.55 16 41 H 0.11 0.08 7.83 -51.93 -0.41 -0.33 16 42 H 0.38 -0.97 8.70 45.56 0.40 -0.58 16 43 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 44 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 45 H 0.14 -0.55 5.10 -52.48 -0.27 -0.82 16 LS Contribution 363.85 15.07 5.48 5.48 Total: 0.00 -9.38 363.85 -10.02 -19.40 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -5.96 Total: -11.61 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -3.08 Total: 0.10 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.28 Total: 0.00 kcal Atomic # 8 Polarization: -5.79 SS G_CDS: -1.14 Total: -6.94 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.08 Total: -6.02 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -9.38 -10.02 -19.40 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_13422088.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.595 kcal (2) G-P(sol) polarization free energy of solvation -9.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds