Wall clock time and date at job start Sun Mar 7 2021 05:28:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35985 * 117.00055 * 2 1 4 4 C 1.38673 * 119.99984 * 180.02562 * 3 2 1 5 5 C 1.38159 * 119.99722 * 179.73790 * 4 3 2 6 6 C 1.50707 * 120.00083 * 180.27724 * 5 4 3 7 7 O 1.42894 * 109.47001 * 255.26095 * 6 5 4 8 8 Si 1.86298 * 109.46942 * 15.25797 * 6 5 4 9 9 C 1.38672 * 120.00077 * 0.53673 * 5 4 3 10 10 O 1.35985 * 120.00388 * 179.71840 * 9 5 4 11 11 C 1.42891 * 117.00193 * 179.72497 * 10 9 5 12 12 C 1.50706 * 109.47345 * 180.02562 * 11 10 9 13 13 O 1.21280 * 119.99401 * 359.97438 * 12 11 10 14 14 N 1.34770 * 120.00125 * 180.02562 * 12 11 10 15 15 C 1.46497 * 119.99944 * 179.97438 * 14 12 11 16 16 H 1.09003 * 109.47523 * 34.99521 * 15 14 12 17 17 C 1.52998 * 109.47639 * 154.99905 * 15 14 12 18 18 C 1.52992 * 109.47796 * 180.02562 * 17 15 14 19 19 C 1.53005 * 109.46821 * 299.99949 * 18 17 15 20 20 H 1.08992 * 109.47214 * 299.99779 * 19 18 17 21 21 C 1.53003 * 109.46848 * 179.97438 * 19 18 17 22 22 F 1.39902 * 109.47112 * 179.97438 * 21 19 18 23 23 C 1.53001 * 109.47019 * 60.00024 * 19 18 17 24 24 C 1.52993 * 109.46969 * 299.99509 * 23 19 18 25 25 C 1.38723 * 119.99775 * 359.43951 * 9 5 4 26 26 C 1.38105 * 120.00142 * 0.28288 * 25 9 5 27 27 H 1.08995 * 109.46819 * 300.00387 * 1 2 3 28 28 H 1.08997 * 109.46970 * 60.00210 * 1 2 3 29 29 H 1.08997 * 109.46714 * 180.02562 * 1 2 3 30 30 H 1.07999 * 120.00214 * 0.02562 * 4 3 2 31 31 H 1.08998 * 109.47040 * 135.25928 * 6 5 4 32 32 H 0.96701 * 114.00649 * 59.99764 * 7 6 5 33 33 H 1.48497 * 110.00048 * 58.68292 * 8 6 5 34 34 H 1.48498 * 110.00156 * 179.97438 * 8 6 5 35 35 H 1.09002 * 109.47220 * 299.99839 * 11 10 9 36 36 H 1.08996 * 109.47672 * 59.99783 * 11 10 9 37 37 H 0.97000 * 120.00241 * 359.97438 * 14 12 11 38 38 H 1.09004 * 109.46860 * 300.00036 * 17 15 14 39 39 H 1.09003 * 109.46976 * 59.99281 * 17 15 14 40 40 H 1.09003 * 109.47470 * 59.99553 * 18 17 15 41 41 H 1.09000 * 109.47814 * 179.97438 * 18 17 15 42 42 H 1.09000 * 109.47230 * 299.99750 * 21 19 18 43 43 H 1.09000 * 109.47517 * 60.00208 * 21 19 18 44 44 H 1.09000 * 109.47626 * 59.99903 * 23 19 18 45 45 H 1.09004 * 109.46984 * 179.97438 * 23 19 18 46 46 H 1.09003 * 109.47777 * 300.00578 * 24 23 19 47 47 H 1.09000 * 109.47478 * 180.02562 * 24 23 19 48 48 H 1.08000 * 120.00014 * 180.29890 * 25 9 5 49 49 H 1.07997 * 120.00382 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5152 -0.0060 6 6 5.5634 2.5941 -0.0129 7 8 6.0269 2.9642 1.2871 8 14 6.2702 0.9334 -0.4747 9 6 3.3032 3.6782 0.0003 10 8 3.9204 4.8899 0.0007 11 6 3.0805 6.0459 0.0012 12 6 3.9347 7.2875 0.0010 13 8 5.1437 7.1917 0.0009 14 7 3.3550 8.5042 0.0019 15 6 4.1853 9.7111 0.0022 16 1 5.0846 9.5337 -0.5876 17 6 3.3972 10.8727 -0.6064 18 6 4.2645 12.1330 -0.6066 19 6 4.6583 12.4813 0.8303 20 1 3.7594 12.6591 1.4204 21 6 5.5262 13.7414 0.8299 22 9 5.8858 14.0603 2.1438 23 6 5.4466 11.3198 1.4389 24 6 4.5792 10.0595 1.4391 25 6 1.9178 3.6056 0.0003 26 6 1.2908 2.3751 0.0000 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 4.0194 0.3784 -0.0014 31 1 5.8847 3.3405 -0.7393 32 1 5.7769 2.3436 1.9853 33 1 5.7703 0.5226 -1.8113 34 1 7.7537 0.9981 -0.4857 35 1 2.4512 6.0381 -0.8887 36 1 2.4513 6.0375 0.8912 37 1 2.3880 8.5808 0.0024 38 1 3.1171 10.6247 -1.6302 39 1 2.4979 11.0501 -0.0165 40 1 5.1636 11.9553 -1.1968 41 1 3.7032 12.9604 -1.0407 42 1 6.4252 13.5632 0.2399 43 1 4.9651 14.5691 0.3962 44 1 6.3456 11.1420 0.8487 45 1 5.7275 11.5682 2.4624 46 1 3.6801 10.2373 2.0293 47 1 5.1405 9.2321 1.8731 48 1 1.3296 4.5113 0.0003 49 1 0.2124 2.3185 0.0004 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:28:37 Heat of formation + Delta-G solvation = -173.406814 kcal Electronic energy + Delta-G solvation = -31457.447357 eV Core-core repulsion = 26879.841845 eV Total energy + Delta-G solvation = -4577.605512 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.58330 -41.81648 -41.13455 -40.01674 -39.18918 -38.16946 -36.90999 -35.66039 -32.83518 -32.23505 -31.82924 -30.88784 -29.27848 -27.95107 -26.63170 -26.37071 -23.94685 -23.65586 -22.45618 -22.36791 -21.64028 -20.91796 -19.61346 -18.78490 -18.54707 -17.74324 -17.52102 -17.31677 -17.17039 -16.89335 -16.66410 -16.61400 -16.46478 -16.13143 -15.87648 -15.62074 -15.52091 -15.21626 -14.99518 -14.88980 -14.64482 -14.38297 -14.28856 -14.09982 -13.58975 -13.47557 -13.41834 -13.22515 -13.20651 -12.99552 -12.59519 -12.48679 -12.34655 -12.17620 -12.10014 -11.83371 -11.77923 -11.56230 -11.46354 -11.42156 -11.25981 -10.93273 -10.41754 -10.18965 -10.11646 -8.79874 -5.05126 0.06445 0.35670 1.25730 1.41694 1.48510 1.61095 1.92362 2.35355 2.55320 2.59748 3.41507 3.49201 3.53926 3.56221 3.66511 3.72839 3.76332 3.88513 3.92567 3.98797 4.06876 4.10410 4.13205 4.21269 4.25824 4.26371 4.31919 4.37809 4.39235 4.45164 4.45305 4.46317 4.49145 4.68952 4.73294 4.80285 4.82095 4.85519 4.97700 5.01694 5.05497 5.11218 5.14997 5.15288 5.22010 5.29244 5.35232 5.42595 5.45823 6.18079 6.41315 6.48478 6.79142 7.11706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.088 3.912 4 C -0.115 4.115 5 C -0.125 4.125 6 C -0.068 4.068 7 O -0.553 6.553 8 Si 0.784 3.216 9 C 0.096 3.904 10 O -0.312 6.312 11 C 0.036 3.964 12 C 0.511 3.489 13 O -0.571 6.571 14 N -0.706 5.706 15 C 0.146 3.854 16 H 0.062 0.938 17 C -0.116 4.116 18 C -0.108 4.108 19 C -0.115 4.115 20 H 0.089 0.911 21 C 0.055 3.945 22 F -0.239 7.239 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.165 4.165 26 C -0.159 4.159 27 H 0.067 0.933 28 H 0.064 0.936 29 H 0.114 0.886 30 H 0.157 0.843 31 H 0.088 0.912 32 H 0.391 0.609 33 H -0.284 1.284 34 H -0.297 1.297 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.421 0.579 38 H 0.083 0.917 39 H 0.090 0.910 40 H 0.066 0.934 41 H 0.093 0.907 42 H 0.081 0.919 43 H 0.096 0.904 44 H 0.057 0.943 45 H 0.060 0.940 46 H 0.079 0.921 47 H 0.039 0.961 48 H 0.164 0.836 49 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.600 0.407 -1.025 11.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.246 6.246 3 C 0.043 3.957 4 C -0.133 4.133 5 C -0.126 4.126 6 C -0.177 4.177 7 O -0.360 6.360 8 Si 0.689 3.311 9 C 0.051 3.949 10 O -0.226 6.226 11 C -0.042 4.042 12 C 0.297 3.703 13 O -0.449 6.449 14 N -0.360 5.360 15 C 0.042 3.958 16 H 0.080 0.920 17 C -0.154 4.154 18 C -0.146 4.146 19 C -0.134 4.134 20 H 0.107 0.893 21 C 0.000 4.000 22 F -0.221 7.221 23 C -0.152 4.152 24 C -0.161 4.161 25 C -0.184 4.184 26 C -0.177 4.177 27 H 0.086 0.914 28 H 0.083 0.917 29 H 0.133 0.867 30 H 0.174 0.826 31 H 0.105 0.895 32 H 0.241 0.759 33 H -0.210 1.210 34 H -0.225 1.225 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.259 0.741 38 H 0.102 0.898 39 H 0.108 0.892 40 H 0.085 0.915 41 H 0.112 0.888 42 H 0.099 0.901 43 H 0.114 0.886 44 H 0.076 0.924 45 H 0.078 0.922 46 H 0.097 0.903 47 H 0.058 0.942 48 H 0.181 0.819 49 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -9.736 0.258 -1.896 9.922 hybrid contribution -0.469 0.835 -0.033 0.958 sum -10.204 1.093 -1.929 10.442 Atomic orbital electron populations 1.23346 0.76460 1.05588 1.02317 1.86083 1.23309 1.26244 1.88991 1.18959 0.92030 0.85231 0.99462 1.20175 0.92332 0.96571 1.04244 1.19511 0.96231 0.90803 1.06071 1.25105 0.91937 1.11711 0.88910 1.86551 1.78206 1.54364 1.16881 0.93977 0.76386 0.77691 0.83095 1.18894 0.91630 0.84554 0.99800 1.86209 1.35276 1.11990 1.89101 1.22709 0.92653 0.82270 1.06523 1.20589 0.88361 0.85640 0.75735 1.90778 1.16878 1.87365 1.49873 1.45759 1.11436 1.04042 1.74784 1.21013 0.94419 0.84056 0.96311 0.91958 1.21743 0.98870 0.92567 1.02176 1.21454 1.00541 0.98004 0.94586 1.21774 0.99203 0.93744 0.98659 0.89282 1.22319 1.00650 0.98557 0.78425 1.92729 1.93798 1.94393 1.41142 1.21502 0.98304 0.94144 1.01217 1.21830 1.00398 0.97083 0.96835 1.21368 0.92048 1.00065 1.04881 1.21406 1.01559 0.90908 1.03855 0.91406 0.91691 0.86731 0.82613 0.89483 0.75926 1.21028 1.22454 0.85928 0.86025 0.74129 0.89841 0.89176 0.91517 0.88846 0.90116 0.88602 0.92401 0.92169 0.90253 0.94168 0.81895 0.82206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.35 10.50 -93.38 -0.98 -1.33 16 3 C 0.09 0.15 6.69 22.49 0.15 0.30 16 4 C -0.12 -0.30 8.59 22.36 0.19 -0.11 16 5 C -0.12 -0.70 5.27 -19.78 -0.10 -0.81 16 6 C -0.07 -0.51 2.37 71.24 0.17 -0.34 16 7 O -0.55 -4.88 12.88 -148.98 -1.92 -6.80 16 8 Si 0.78 2.51 29.92 68.60 2.05 4.56 16 9 C 0.10 0.50 6.66 22.49 0.15 0.65 16 10 O -0.31 -2.68 9.00 -74.34 -0.67 -3.35 16 11 C 0.04 -0.04 5.22 71.24 0.37 0.33 16 12 C 0.51 2.45 7.87 87.66 0.69 3.14 16 13 O -0.57 -9.90 16.16 16.01 0.26 -9.64 16 14 N -0.71 2.23 5.08 -442.53 -2.25 -0.01 16 15 C 0.15 -0.15 2.45 44.99 0.11 -0.04 16 16 H 0.06 0.33 7.58 -2.39 -0.02 0.31 16 17 C -0.12 0.87 5.39 30.59 0.16 1.04 16 18 C -0.11 0.76 5.20 30.59 0.16 0.92 16 19 C -0.12 0.43 2.52 -10.79 -0.03 0.40 16 20 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 21 C 0.06 -0.13 6.96 71.98 0.50 0.37 16 22 F -0.24 -1.34 16.84 44.97 0.76 -0.58 16 23 C -0.11 -0.11 5.08 30.59 0.16 0.05 16 24 C -0.12 -0.14 5.50 30.59 0.17 0.03 16 25 C -0.17 0.23 9.03 22.35 0.20 0.43 16 26 C -0.16 0.31 9.03 22.35 0.20 0.51 16 27 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 28 H 0.06 -0.54 7.66 -2.39 -0.02 -0.56 16 29 H 0.11 -1.04 8.14 -2.39 -0.02 -1.06 16 30 H 0.16 -0.19 5.14 -2.91 -0.01 -0.21 16 31 H 0.09 1.11 7.82 -2.39 -0.02 1.09 16 32 H 0.39 -0.35 8.70 -74.06 -0.64 -0.99 16 33 H -0.28 -2.14 7.11 99.48 0.71 -1.43 16 34 H -0.30 -3.04 7.11 99.48 0.71 -2.34 16 35 H 0.12 -0.99 7.66 -2.39 -0.02 -1.01 16 36 H 0.12 -0.92 7.66 -2.39 -0.02 -0.93 16 37 H 0.42 -4.80 8.60 -92.71 -0.80 -5.59 16 38 H 0.08 -0.72 8.14 -2.38 -0.02 -0.74 16 39 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 40 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 41 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 42 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 43 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 44 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 45 H 0.06 0.22 7.80 -2.38 -0.02 0.20 16 46 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 47 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 48 H 0.16 -1.39 6.29 -2.91 -0.02 -1.41 16 49 H 0.16 -1.23 6.29 -2.91 -0.02 -1.24 16 Total: 0.00 -30.45 396.66 1.20 -29.25 By element: Atomic # 1 Polarization: -19.54 SS G_CDS: -0.42 Total: -19.96 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: 4.37 Total: 7.86 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -2.25 Total: -0.01 kcal Atomic # 8 Polarization: -17.81 SS G_CDS: -3.31 Total: -21.12 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 0.76 Total: -0.58 kcal Atomic # 14 Polarization: 2.51 SS G_CDS: 2.05 Total: 4.56 kcal Total: -30.45 1.20 -29.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.157 kcal (2) G-P(sol) polarization free energy of solvation -30.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.199 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds