Wall clock time and date at job start Sun Mar 7 2021 05:28:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38681 * 119.95165 * 359.97205 * 6 5 4 8 8 O 1.35917 * 120.05777 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99851 * 0.02562 * 8 7 6 10 10 C 1.50703 * 109.46846 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00227 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99861 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99748 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.46938 * 324.99399 * 13 12 10 15 15 C 1.53001 * 109.47440 * 84.99677 * 13 12 10 16 16 C 1.52995 * 109.47055 * 179.97438 * 15 13 12 17 17 C 1.53002 * 109.47330 * 299.99589 * 16 15 13 18 18 H 1.08994 * 109.46911 * 300.00702 * 17 16 15 19 19 C 1.52995 * 109.47330 * 179.97438 * 17 16 15 20 20 F 1.39911 * 109.47097 * 65.00252 * 19 17 16 21 21 C 1.53001 * 109.46716 * 60.00203 * 17 16 15 22 22 C 1.52995 * 109.47055 * 299.99965 * 21 17 16 23 23 C 1.38830 * 119.88032 * 0.02562 * 7 6 5 24 24 Br 1.89111 * 120.03419 * 180.02562 * 23 7 6 25 25 C 1.38193 * 119.93151 * 359.76266 * 23 7 6 26 26 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 27 27 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 28 28 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 29 29 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 30 30 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 31 31 H 1.07995 * 120.02734 * 179.97438 * 6 5 4 32 32 H 1.09004 * 109.47307 * 299.99653 * 9 8 7 33 33 H 1.09001 * 109.47449 * 60.00236 * 9 8 7 34 34 H 0.97000 * 120.00562 * 359.97438 * 12 10 9 35 35 H 1.08999 * 109.46692 * 299.99895 * 15 13 12 36 36 H 1.09004 * 109.47056 * 59.99444 * 15 13 12 37 37 H 1.09004 * 109.47076 * 179.97438 * 16 15 13 38 38 H 1.09004 * 109.47584 * 59.99838 * 16 15 13 39 39 H 1.08993 * 109.47272 * 185.00191 * 19 17 16 40 40 H 1.09006 * 109.47529 * 305.00344 * 19 17 16 41 41 H 1.08999 * 109.46692 * 179.97438 * 21 17 16 42 42 H 1.09002 * 109.47282 * 59.99962 * 21 17 16 43 43 H 1.08994 * 109.47736 * 299.99634 * 22 21 17 44 44 H 1.09004 * 109.47076 * 180.02562 * 22 21 17 45 45 H 1.07999 * 119.97803 * 180.23619 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3061 -2.6568 -4.5991 9 6 2.9213 -4.0234 -4.7610 10 6 3.5126 -4.5638 -6.0374 11 8 4.1958 -3.8489 -6.7396 12 7 3.2813 -5.8414 -6.3993 13 6 3.8566 -6.3669 -7.6399 14 1 3.8761 -5.5795 -8.3934 15 6 5.2824 -6.8543 -7.3745 16 6 5.8829 -7.4037 -8.6700 17 6 5.0304 -8.5706 -9.1727 18 1 5.0110 -9.3575 -8.4188 19 6 5.6305 -9.1195 -10.4685 20 9 6.8898 -9.6686 -10.2034 21 6 3.6046 -8.0831 -9.4380 22 6 3.0041 -7.5337 -8.1426 23 6 3.1884 -0.6865 -3.2689 24 35 4.2748 0.2348 -4.5128 25 6 2.7226 -0.0357 -2.1423 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5616 2.4678 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 0.9758 -2.5574 -0.7361 31 1 1.7943 -3.7220 -2.7445 32 1 3.2874 -4.6065 -3.9160 33 1 1.8343 -4.0919 -4.8061 34 1 2.7345 -6.4131 -5.8379 35 1 5.8896 -6.0232 -7.0160 36 1 5.2629 -7.6416 -6.6209 37 1 6.8989 -7.7506 -8.4811 38 1 5.9024 -6.6167 -9.4240 39 1 4.9759 -9.8910 -10.8739 40 1 5.7318 -8.3115 -11.1931 41 1 2.9974 -8.9143 -9.7966 42 1 3.6240 -7.2961 -10.1919 43 1 2.9845 -8.3207 -7.3887 44 1 1.9881 -7.1869 -8.3315 45 1 2.9796 0.9993 -1.9719 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:28:51 Heat of formation + Delta-G solvation = -133.991971 kcal Electronic energy + Delta-G solvation = -28807.376731 eV Core-core repulsion = 24365.882183 eV Total energy + Delta-G solvation = -4441.494548 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.067 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -48.53392 -41.76679 -40.99908 -39.63743 -38.87307 -37.29165 -35.65468 -33.51514 -32.41991 -32.03797 -31.96175 -30.40346 -29.46412 -26.71516 -26.20970 -24.15364 -23.94314 -22.71581 -22.33567 -21.64835 -21.04388 -19.63432 -18.64727 -18.23020 -17.61904 -17.37943 -17.19506 -16.91022 -16.68738 -16.54484 -16.45433 -16.09700 -15.75349 -15.71500 -15.34467 -15.10918 -14.91942 -14.78313 -14.44418 -14.31021 -14.11476 -13.95731 -13.55354 -13.46452 -13.38545 -13.23552 -12.64237 -12.50973 -12.33204 -12.30033 -12.18698 -11.88810 -11.84915 -11.81367 -11.67906 -11.56643 -11.32056 -11.06400 -10.88083 -10.53899 -10.20225 -10.03190 -9.33049 -5.09200 -0.08499 0.02030 0.69278 1.21677 1.29530 1.44069 1.57777 1.92094 2.32985 2.38073 3.27535 3.35910 3.38739 3.42087 3.43785 3.53573 3.64303 3.67392 3.74221 3.76890 3.83220 3.92815 3.98592 4.06455 4.11914 4.20680 4.25022 4.26323 4.32892 4.35858 4.36851 4.51472 4.59875 4.68276 4.71506 4.71629 4.86653 4.92932 4.93711 4.95939 5.10027 5.17907 5.21074 5.26111 5.33112 5.37884 5.95306 6.28413 6.48139 7.04659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.679 3.321 4 C -0.152 4.152 5 C -0.035 4.035 6 C -0.205 4.205 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.516 3.484 11 O -0.505 6.505 12 N -0.725 5.725 13 C 0.147 3.853 14 H 0.092 0.908 15 C -0.129 4.129 16 C -0.114 4.114 17 C -0.123 4.123 18 H 0.084 0.916 19 C 0.064 3.936 20 F -0.217 7.217 21 C -0.110 4.110 22 C -0.125 4.125 23 C -0.119 4.119 24 Br -0.023 7.023 25 C -0.050 4.050 26 H 0.380 0.620 27 H 0.117 0.883 28 H -0.250 1.250 29 H -0.254 1.254 30 H 0.138 0.862 31 H 0.139 0.861 32 H 0.096 0.904 33 H 0.097 0.903 34 H 0.401 0.599 35 H 0.071 0.929 36 H 0.066 0.934 37 H 0.073 0.927 38 H 0.068 0.932 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.074 0.926 42 H 0.071 0.929 43 H 0.071 0.929 44 H 0.074 0.926 45 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.522 -3.588 0.018 6.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.581 3.419 4 C -0.153 4.153 5 C -0.054 4.054 6 C -0.224 4.224 7 C 0.113 3.887 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.300 3.700 11 O -0.378 6.378 12 N -0.379 5.379 13 C 0.043 3.957 14 H 0.110 0.890 15 C -0.168 4.168 16 C -0.152 4.152 17 C -0.142 4.142 18 H 0.102 0.898 19 C 0.009 3.991 20 F -0.198 7.198 21 C -0.148 4.148 22 C -0.163 4.163 23 C -0.199 4.199 24 Br 0.062 6.938 25 C -0.069 4.069 26 H 0.228 0.772 27 H 0.134 0.866 28 H -0.175 1.175 29 H -0.178 1.178 30 H 0.155 0.845 31 H 0.157 0.843 32 H 0.114 0.886 33 H 0.115 0.885 34 H 0.236 0.764 35 H 0.090 0.910 36 H 0.084 0.916 37 H 0.092 0.908 38 H 0.087 0.913 39 H 0.093 0.907 40 H 0.094 0.906 41 H 0.093 0.907 42 H 0.090 0.910 43 H 0.090 0.910 44 H 0.092 0.908 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.871 -2.338 -0.154 4.525 hybrid contribution -0.475 -1.406 0.872 1.721 sum -4.347 -3.744 0.718 5.781 Atomic orbital electron populations 1.86506 1.16960 1.81644 1.49377 1.24927 0.85283 1.09904 0.97002 0.94778 0.81472 0.78113 0.87583 1.20252 1.01543 0.95540 0.98006 1.20938 0.95524 0.93282 0.95607 1.21288 1.03192 1.01279 0.96636 1.18636 0.92869 0.90792 0.86447 1.86282 1.69512 1.23839 1.38856 1.22561 1.01169 0.82666 0.97780 1.19945 0.81274 0.82167 0.86590 1.90810 1.36891 1.57261 1.52861 1.45896 1.54318 1.11878 1.25774 1.21068 0.92644 0.96219 0.85789 0.88998 1.21914 0.95659 1.01148 0.98044 1.21544 0.99326 0.97081 0.97216 1.21840 0.95673 0.99017 0.97634 0.89770 1.22069 0.80699 0.98596 0.97762 1.92781 1.43883 1.87691 1.95487 1.21443 0.94697 1.01289 0.97371 1.21777 0.99228 0.97236 0.98020 1.20996 1.06692 0.93298 0.98943 1.96818 1.65604 1.74629 1.56733 1.20856 0.95291 0.99405 0.91360 0.77232 0.86599 1.17498 1.17842 0.84464 0.84321 0.88573 0.88486 0.76447 0.91015 0.91559 0.90841 0.91289 0.90662 0.90637 0.90746 0.91002 0.91031 0.90755 0.84058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.44 12.77 -35.23 -0.45 -0.01 16 2 C -0.06 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.68 -0.81 29.78 -169.99 -5.06 -5.87 16 4 C -0.15 0.09 5.39 -104.60 -0.56 -0.48 16 5 C -0.04 0.04 9.60 -39.60 -0.38 -0.34 16 6 C -0.20 0.23 9.04 -39.44 -0.36 -0.13 16 7 C 0.16 0.21 6.68 -39.20 -0.26 -0.05 16 8 O -0.27 -0.60 9.01 -39.39 -0.35 -0.96 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.12 16 10 C 0.52 0.33 7.87 -10.98 -0.09 0.24 16 11 O -0.51 -2.86 16.16 -14.36 -0.23 -3.09 16 12 N -0.73 1.77 5.08 -53.80 -0.27 1.50 16 13 C 0.15 -0.24 2.46 -67.93 -0.17 -0.41 16 14 H 0.09 0.05 7.58 -51.93 -0.39 -0.35 16 15 C -0.13 0.11 5.49 -26.73 -0.15 -0.04 16 16 C -0.11 0.11 5.12 -26.73 -0.14 -0.03 16 17 C -0.12 0.27 2.49 -90.62 -0.23 0.04 16 18 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 19 C 0.06 -0.10 6.91 37.15 0.26 0.16 16 20 F -0.22 -0.46 17.04 2.25 0.04 -0.42 16 21 C -0.11 0.38 5.20 -26.73 -0.14 0.24 16 22 C -0.12 0.46 5.39 -26.73 -0.14 0.31 16 23 C -0.12 -0.23 6.24 -39.38 -0.25 -0.48 16 24 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.33 16 25 C -0.05 -0.01 8.40 -39.58 -0.33 -0.34 16 26 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 27 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 29 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 30 H 0.14 -0.31 8.06 -52.48 -0.42 -0.73 16 31 H 0.14 -0.55 6.30 -52.49 -0.33 -0.88 16 32 H 0.10 -0.41 7.66 -51.93 -0.40 -0.80 16 33 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 34 H 0.40 -2.26 8.60 -40.82 -0.35 -2.62 16 35 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 0.01 7.94 -51.93 -0.41 -0.41 16 38 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 42 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 43 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 44 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 45 H 0.14 -0.15 4.87 -52.49 -0.26 -0.40 16 LS Contribution 388.28 15.07 5.85 5.85 Total: 0.00 -9.38 388.28 -11.78 -21.16 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -6.40 Total: -14.82 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -2.64 Total: -1.01 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.27 Total: 1.50 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: -1.04 Total: -4.06 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.06 Total: -5.87 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.38 -11.78 -21.16 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.829 kcal (2) G-P(sol) polarization free energy of solvation -9.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds