Wall clock time and date at job start Sun Mar 7 2021 05:28:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38681 * 119.95165 * 359.97205 * 6 5 4 8 8 O 1.35917 * 120.05777 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99851 * 0.02562 * 8 7 6 10 10 C 1.50703 * 109.46846 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00227 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99861 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99748 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.46938 * 324.99399 * 13 12 10 15 15 C 1.53001 * 109.47440 * 84.99677 * 13 12 10 16 16 C 1.52995 * 109.47055 * 179.97438 * 15 13 12 17 17 C 1.53002 * 109.47330 * 299.99589 * 16 15 13 18 18 H 1.08994 * 109.46911 * 300.00702 * 17 16 15 19 19 C 1.52995 * 109.47330 * 179.97438 * 17 16 15 20 20 F 1.39911 * 109.47097 * 65.00252 * 19 17 16 21 21 C 1.53001 * 109.46716 * 60.00203 * 17 16 15 22 22 C 1.52995 * 109.47055 * 299.99965 * 21 17 16 23 23 C 1.38830 * 119.88032 * 0.02562 * 7 6 5 24 24 Br 1.89111 * 120.03419 * 180.02562 * 23 7 6 25 25 C 1.38193 * 119.93151 * 359.76266 * 23 7 6 26 26 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 27 27 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 28 28 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 29 29 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 30 30 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 31 31 H 1.07995 * 120.02734 * 179.97438 * 6 5 4 32 32 H 1.09004 * 109.47307 * 299.99653 * 9 8 7 33 33 H 1.09001 * 109.47449 * 60.00236 * 9 8 7 34 34 H 0.97000 * 120.00562 * 359.97438 * 12 10 9 35 35 H 1.08999 * 109.46692 * 299.99895 * 15 13 12 36 36 H 1.09004 * 109.47056 * 59.99444 * 15 13 12 37 37 H 1.09004 * 109.47076 * 179.97438 * 16 15 13 38 38 H 1.09004 * 109.47584 * 59.99838 * 16 15 13 39 39 H 1.08993 * 109.47272 * 185.00191 * 19 17 16 40 40 H 1.09006 * 109.47529 * 305.00344 * 19 17 16 41 41 H 1.08999 * 109.46692 * 179.97438 * 21 17 16 42 42 H 1.09002 * 109.47282 * 59.99962 * 21 17 16 43 43 H 1.08994 * 109.47736 * 299.99634 * 22 21 17 44 44 H 1.09004 * 109.47076 * 180.02562 * 22 21 17 45 45 H 1.07999 * 119.97803 * 180.23619 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3061 -2.6568 -4.5991 9 6 2.9213 -4.0234 -4.7610 10 6 3.5126 -4.5638 -6.0374 11 8 4.1958 -3.8489 -6.7396 12 7 3.2813 -5.8414 -6.3993 13 6 3.8566 -6.3669 -7.6399 14 1 3.8761 -5.5795 -8.3934 15 6 5.2824 -6.8543 -7.3745 16 6 5.8829 -7.4037 -8.6700 17 6 5.0304 -8.5706 -9.1727 18 1 5.0110 -9.3575 -8.4188 19 6 5.6305 -9.1195 -10.4685 20 9 6.8898 -9.6686 -10.2034 21 6 3.6046 -8.0831 -9.4380 22 6 3.0041 -7.5337 -8.1426 23 6 3.1884 -0.6865 -3.2689 24 35 4.2748 0.2348 -4.5128 25 6 2.7226 -0.0357 -2.1423 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5616 2.4678 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 0.9758 -2.5574 -0.7361 31 1 1.7943 -3.7220 -2.7445 32 1 3.2874 -4.6065 -3.9160 33 1 1.8343 -4.0919 -4.8061 34 1 2.7345 -6.4131 -5.8379 35 1 5.8896 -6.0232 -7.0160 36 1 5.2629 -7.6416 -6.6209 37 1 6.8989 -7.7506 -8.4811 38 1 5.9024 -6.6167 -9.4240 39 1 4.9759 -9.8910 -10.8739 40 1 5.7318 -8.3115 -11.1931 41 1 2.9974 -8.9143 -9.7966 42 1 3.6240 -7.2961 -10.1919 43 1 2.9845 -8.3207 -7.3887 44 1 1.9881 -7.1869 -8.3315 45 1 2.9796 0.9993 -1.9719 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:28:50 Heat of formation + Delta-G solvation = -132.186317 kcal Electronic energy + Delta-G solvation = -28807.298432 eV Core-core repulsion = 24365.882183 eV Total energy + Delta-G solvation = -4441.416249 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.067 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -48.57044 -41.72775 -40.95631 -39.55663 -38.84769 -37.21382 -35.63336 -33.51282 -32.35013 -31.96733 -31.80133 -30.41125 -29.36715 -26.62816 -26.10888 -24.09102 -23.79841 -22.62873 -22.24117 -21.61592 -20.90569 -19.56170 -18.57596 -18.14234 -17.52978 -17.36023 -17.11283 -16.84681 -16.64469 -16.47422 -16.39537 -16.01226 -15.72374 -15.67016 -15.30008 -15.00828 -14.88321 -14.78781 -14.35476 -14.28765 -14.08551 -13.89430 -13.45978 -13.40160 -13.21745 -13.18521 -12.54331 -12.42619 -12.24953 -12.20105 -12.14469 -11.87364 -11.86716 -11.76869 -11.56054 -11.43649 -11.23649 -11.20791 -10.91216 -10.46805 -10.15529 -10.00519 -9.31877 -5.03799 -0.04135 0.07569 0.62899 1.28320 1.40276 1.45346 1.58855 1.92530 2.39459 2.49407 3.41798 3.48597 3.54721 3.55480 3.57336 3.68474 3.78318 3.83724 3.91244 4.00478 4.02059 4.07957 4.08375 4.22960 4.29109 4.33465 4.33866 4.40431 4.45926 4.47766 4.51717 4.62035 4.74650 4.78212 4.83254 4.87628 5.03052 5.04540 5.07902 5.13498 5.17605 5.29474 5.31374 5.37781 5.44652 5.49062 6.04920 6.45895 6.77233 7.14483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.744 3.256 4 C -0.151 4.151 5 C -0.033 4.033 6 C -0.195 4.195 7 C 0.149 3.851 8 O -0.305 6.305 9 C 0.034 3.966 10 C 0.511 3.489 11 O -0.567 6.567 12 N -0.707 5.707 13 C 0.147 3.853 14 H 0.065 0.935 15 C -0.123 4.123 16 C -0.114 4.114 17 C -0.115 4.115 18 H 0.087 0.913 19 C 0.055 3.945 20 F -0.240 7.240 21 C -0.108 4.108 22 C -0.116 4.116 23 C -0.140 4.140 24 Br -0.050 7.050 25 C -0.055 4.055 26 H 0.396 0.604 27 H 0.118 0.882 28 H -0.292 1.292 29 H -0.289 1.289 30 H 0.156 0.844 31 H 0.173 0.827 32 H 0.127 0.873 33 H 0.131 0.869 34 H 0.421 0.579 35 H 0.041 0.959 36 H 0.077 0.923 37 H 0.058 0.942 38 H 0.059 0.941 39 H 0.095 0.905 40 H 0.081 0.919 41 H 0.091 0.909 42 H 0.068 0.932 43 H 0.088 0.912 44 H 0.084 0.916 45 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.925 -5.773 0.852 9.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.652 3.348 4 C -0.153 4.153 5 C -0.051 4.051 6 C -0.214 4.214 7 C 0.101 3.899 8 O -0.217 6.217 9 C -0.044 4.044 10 C 0.297 3.703 11 O -0.445 6.445 12 N -0.361 5.361 13 C 0.043 3.957 14 H 0.083 0.917 15 C -0.162 4.162 16 C -0.152 4.152 17 C -0.134 4.134 18 H 0.105 0.895 19 C 0.000 4.000 20 F -0.221 7.221 21 C -0.146 4.146 22 C -0.154 4.154 23 C -0.220 4.220 24 Br 0.035 6.965 25 C -0.075 4.075 26 H 0.246 0.754 27 H 0.136 0.864 28 H -0.220 1.220 29 H -0.217 1.217 30 H 0.174 0.826 31 H 0.190 0.810 32 H 0.144 0.856 33 H 0.149 0.851 34 H 0.259 0.741 35 H 0.060 0.940 36 H 0.096 0.904 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.113 0.887 40 H 0.099 0.901 41 H 0.110 0.890 42 H 0.086 0.914 43 H 0.107 0.893 44 H 0.103 0.897 45 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -6.320 -4.567 0.678 7.827 hybrid contribution 0.272 -0.736 0.646 1.016 sum -6.048 -5.302 1.324 8.152 Atomic orbital electron populations 1.86474 1.16725 1.81966 1.50627 1.24818 0.85452 1.09242 0.96882 0.93976 0.78387 0.77045 0.85439 1.20303 1.01235 0.96018 0.97714 1.21205 0.95150 0.92955 0.95825 1.21605 1.01669 1.02571 0.95516 1.18812 0.93550 0.90665 0.86877 1.86244 1.70268 1.25701 1.39471 1.22839 1.03003 0.81385 0.97174 1.20515 0.80366 0.82473 0.86928 1.90788 1.39828 1.58966 1.54945 1.45763 1.53530 1.11252 1.25523 1.21002 0.92784 0.96312 0.85600 0.91679 1.21835 0.95820 1.00311 0.98229 1.21516 0.99021 0.97543 0.97093 1.21774 0.96132 0.98182 0.97323 0.89469 1.22331 0.79887 0.99425 0.98357 1.92733 1.45644 1.88081 1.95665 1.21455 0.93871 1.01766 0.97514 1.21743 0.98979 0.96479 0.98208 1.21143 1.07567 0.94055 0.99249 1.96775 1.66574 1.75219 1.57926 1.20923 0.95566 0.99767 0.91211 0.75376 0.86432 1.21984 1.21652 0.82633 0.80994 0.85553 0.85109 0.74114 0.93964 0.90413 0.92307 0.92177 0.88680 0.90071 0.89012 0.91366 0.89346 0.89739 0.83671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.72 12.77 -148.98 -1.90 -0.18 16 2 C -0.05 0.16 2.82 71.24 0.20 0.36 16 3 Si 0.74 -1.31 29.78 68.60 2.04 0.73 16 4 C -0.15 0.33 5.39 -19.85 -0.11 0.22 16 5 C -0.03 0.14 9.60 22.26 0.21 0.36 16 6 C -0.19 0.90 9.04 22.36 0.20 1.10 16 7 C 0.15 0.31 6.68 22.52 0.15 0.47 16 8 O -0.30 -1.40 9.01 -73.58 -0.66 -2.06 16 9 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.81 7.87 87.66 0.69 1.50 16 11 O -0.57 -7.80 16.16 16.00 0.26 -7.54 16 12 N -0.71 3.93 5.08 -442.51 -2.25 1.68 16 13 C 0.15 -0.44 2.46 44.99 0.11 -0.33 16 14 H 0.06 0.19 7.58 -2.39 -0.02 0.18 16 15 C -0.12 0.07 5.49 30.59 0.17 0.24 16 16 C -0.11 0.05 5.12 30.59 0.16 0.21 16 17 C -0.12 0.53 2.49 -10.79 -0.03 0.51 16 18 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 19 C 0.05 -0.17 6.91 71.98 0.50 0.33 16 20 F -0.24 -1.19 17.04 44.97 0.77 -0.43 16 21 C -0.11 0.87 5.20 30.59 0.16 1.03 16 22 C -0.12 1.03 5.39 30.59 0.16 1.20 16 23 C -0.14 -0.64 6.24 22.40 0.14 -0.50 16 24 Br -0.05 -0.41 33.16 -20.37 -0.68 -1.09 16 25 C -0.06 -0.04 8.40 22.27 0.19 0.15 16 26 H 0.40 -4.16 8.70 -74.05 -0.64 -4.81 16 27 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 28 H -0.29 -1.53 7.11 99.48 0.71 -0.82 16 29 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 30 H 0.16 -1.22 8.06 -2.91 -0.02 -1.24 16 31 H 0.17 -2.07 6.30 -2.91 -0.02 -2.09 16 32 H 0.13 -1.41 7.66 -2.38 -0.02 -1.43 16 33 H 0.13 -1.56 7.66 -2.39 -0.02 -1.58 16 34 H 0.42 -5.72 8.60 -92.71 -0.80 -6.51 16 35 H 0.04 0.23 8.14 -2.39 -0.02 0.21 16 36 H 0.08 -0.24 8.14 -2.38 -0.02 -0.26 16 37 H 0.06 0.13 7.94 -2.38 -0.02 0.12 16 38 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 39 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 40 H 0.08 -0.36 8.14 -2.38 -0.02 -0.38 16 41 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 42 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 43 H 0.09 -1.03 8.14 -2.39 -0.02 -1.04 16 44 H 0.08 -0.85 8.14 -2.38 -0.02 -0.87 16 45 H 0.15 -0.17 4.87 -2.91 -0.01 -0.18 16 Total: 0.00 -26.48 388.28 0.49 -25.99 By element: Atomic # 1 Polarization: -23.78 SS G_CDS: -0.37 Total: -24.15 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 3.28 Total: 7.05 kcal Atomic # 7 Polarization: 3.93 SS G_CDS: -2.25 Total: 1.68 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -2.31 Total: -9.78 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.77 Total: -0.43 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: 2.04 Total: 0.73 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -0.68 Total: -1.09 kcal Total: -26.48 0.49 -25.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.192 kcal (2) G-P(sol) polarization free energy of solvation -26.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.675 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds