Wall clock time and date at job start Sun Mar 7 2021 05:29:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86292 * 109.46888 * 2 1 4 4 C 1.50701 * 109.47137 * 239.99952 * 2 1 3 5 5 C 1.34235 * 126.49590 * 105.31525 * 4 2 1 6 6 N 1.36839 * 109.93744 * 180.16622 * 5 4 2 7 7 C 1.46499 * 125.06451 * 179.81274 * 6 5 4 8 8 C 1.50700 * 109.47257 * 264.69900 * 7 6 5 9 9 O 1.21283 * 119.99803 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99675 * 180.27849 * 8 7 6 11 11 C 1.46497 * 119.99525 * 179.72583 * 10 8 7 12 12 H 1.09007 * 109.47747 * 35.00142 * 11 10 8 13 13 C 1.53006 * 109.47036 * 154.99621 * 11 10 8 14 14 C 1.52998 * 109.47344 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.46921 * 300.00334 * 14 13 11 16 16 H 1.08999 * 109.47539 * 299.99851 * 15 14 13 17 17 C 1.53007 * 109.47279 * 180.02562 * 15 14 13 18 18 F 1.39895 * 109.47348 * 180.02562 * 17 15 14 19 19 C 1.52999 * 109.47579 * 59.99872 * 15 14 13 20 20 C 1.52998 * 109.47099 * 300.00018 * 19 15 14 21 21 C 1.37693 * 109.87040 * 359.55342 * 6 5 4 22 22 C 1.39087 * 133.51106 * 180.24023 * 21 6 5 23 23 C 1.37794 * 119.77496 * 180.02562 * 22 21 6 24 24 C 1.38795 * 120.66767 * 0.02562 * 23 22 21 25 25 C 1.36652 * 120.52490 * 359.97438 * 24 23 22 26 26 C 1.39591 * 119.76923 * 0.02562 * 25 24 23 27 27 H 0.96698 * 114.00024 * 60.00377 * 1 2 3 28 28 H 1.08997 * 109.47029 * 120.00071 * 2 1 3 29 29 H 1.48510 * 110.00141 * 60.00133 * 3 2 1 30 30 H 1.48505 * 110.00135 * 181.31702 * 3 2 1 31 31 H 1.08002 * 125.03481 * 0.02562 * 5 4 2 32 32 H 1.09009 * 109.46700 * 144.69794 * 7 6 5 33 33 H 1.08998 * 109.46827 * 24.70369 * 7 6 5 34 34 H 0.97000 * 119.99894 * 359.71837 * 10 8 7 35 35 H 1.09001 * 109.47081 * 299.99960 * 13 11 10 36 36 H 1.09002 * 109.47134 * 59.99771 * 13 11 10 37 37 H 1.09002 * 109.47122 * 59.99850 * 14 13 11 38 38 H 1.08998 * 109.47333 * 180.02562 * 14 13 11 39 39 H 1.09008 * 109.46652 * 299.99967 * 17 15 14 40 40 H 1.08995 * 109.46926 * 59.99368 * 17 15 14 41 41 H 1.09002 * 109.47185 * 60.00042 * 19 15 14 42 42 H 1.09001 * 109.47276 * 180.02562 * 19 15 14 43 43 H 1.09002 * 109.47122 * 300.00063 * 20 19 15 44 44 H 1.08998 * 109.47333 * 179.97438 * 20 19 15 45 45 H 1.07991 * 120.11681 * 0.04424 * 22 21 6 46 46 H 1.08005 * 119.66405 * 179.97438 * 23 22 21 47 47 H 1.08000 * 119.73190 * 179.97438 * 24 23 22 48 48 H 1.08008 * 120.11806 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4662 -0.1379 -2.3205 6 7 2.8029 -1.0989 -3.2346 7 6 3.4077 -0.8402 -4.5436 8 6 2.3280 -0.7838 -5.5935 9 8 1.1676 -0.9444 -5.2792 10 7 2.6525 -0.5610 -6.8825 11 6 1.6035 -0.5121 -7.9039 12 1 0.7045 -0.0641 -7.4805 13 6 2.0835 0.3296 -9.0881 14 6 0.9882 0.3801 -10.1551 15 6 0.6751 -1.0395 -10.6321 16 1 1.5742 -1.4873 -11.0553 17 6 -0.4198 -0.9890 -11.6997 18 9 -0.7066 -2.2870 -12.1355 19 6 0.1951 -1.8812 -9.4481 20 6 1.2903 -1.9317 -8.3810 21 6 2.4940 -2.3456 -2.7384 22 6 2.6287 -3.6361 -3.2395 23 6 2.2145 -4.7106 -2.4828 24 6 1.6627 -4.5192 -1.2238 25 6 1.5211 -3.2600 -0.7122 26 6 1.9340 -2.1570 -1.4615 27 1 -0.3933 0.4416 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 1.2086 30 1 3.5346 1.7703 -0.0321 31 1 2.6076 0.9241 -2.4568 32 1 4.1077 -1.6403 -4.7849 33 1 3.9386 0.1113 -4.5169 34 1 3.5806 -0.4329 -7.1338 35 1 2.3070 1.3408 -8.7481 36 1 2.9825 -0.1184 -9.5116 37 1 0.0890 0.8278 -9.7319 38 1 1.3303 0.9794 -10.9989 39 1 -1.3191 -0.5410 -11.2769 40 1 -0.0774 -0.3894 -12.5431 41 1 -0.7042 -1.4335 -9.0249 42 1 -0.0276 -2.8927 -9.7879 43 1 2.1895 -2.3794 -8.8042 44 1 0.9482 -2.5310 -7.5372 45 1 3.0567 -3.7954 -4.2180 46 1 2.3196 -5.7119 -2.8739 47 1 1.3428 -5.3723 -0.6439 48 1 1.0912 -3.1186 0.2685 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:29:17 Heat of formation + Delta-G solvation = -64.227293 kcal Electronic energy + Delta-G solvation = -30580.586000 eV Core-core repulsion = 26323.201060 eV Total energy + Delta-G solvation = -4257.384941 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -48.55360 -42.48227 -41.06952 -39.35866 -37.97454 -37.49438 -35.67431 -34.06810 -32.18003 -31.97953 -31.14729 -30.11460 -28.92896 -26.70820 -25.51597 -24.01179 -23.64587 -22.86267 -22.26510 -21.66490 -21.07998 -20.55709 -18.68100 -18.41729 -17.75972 -17.42183 -17.07279 -16.94889 -16.71776 -16.50837 -16.31116 -16.22848 -15.90050 -15.47949 -15.36301 -15.20190 -14.99953 -14.71182 -14.57481 -14.50878 -14.30921 -13.95713 -13.78334 -13.54667 -13.41453 -13.33032 -13.18134 -12.66059 -12.59300 -12.44511 -12.33496 -12.10838 -12.00843 -11.90147 -11.68395 -11.67240 -11.60158 -11.35528 -11.02124 -10.41400 -10.21865 -10.20512 -9.02017 -8.52321 -5.01420 0.28130 0.79881 1.38581 1.39063 1.42556 1.67892 1.73460 2.03405 2.10898 3.11521 3.29249 3.38318 3.45170 3.48769 3.55676 3.66261 3.71836 3.76865 3.81374 3.85938 3.90688 4.04451 4.08958 4.09877 4.18825 4.23995 4.30646 4.31640 4.33495 4.37748 4.58025 4.58211 4.66099 4.70536 4.71592 4.79657 4.84926 4.90141 4.91093 4.93297 4.99012 5.08257 5.16563 5.24102 5.25706 5.34043 5.64949 5.81172 5.86608 5.90329 6.15955 6.31968 6.37308 6.78619 7.01129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.198 4.198 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.492 3.508 9 O -0.511 6.511 10 N -0.726 5.726 11 C 0.146 3.854 12 H 0.090 0.910 13 C -0.124 4.124 14 C -0.110 4.110 15 C -0.123 4.123 16 H 0.083 0.917 17 C 0.064 3.936 18 F -0.217 7.217 19 C -0.114 4.114 20 C -0.127 4.127 21 C 0.109 3.891 22 C -0.128 4.128 23 C -0.097 4.097 24 C -0.146 4.146 25 C -0.066 4.066 26 C -0.087 4.087 27 H 0.377 0.623 28 H 0.110 0.890 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.171 0.829 32 H 0.117 0.883 33 H 0.122 0.878 34 H 0.401 0.599 35 H 0.073 0.927 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.068 0.932 42 H 0.073 0.927 43 H 0.065 0.935 44 H 0.069 0.931 45 H 0.114 0.886 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.608 4.282 -5.398 8.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.276 3.724 9 O -0.385 6.385 10 N -0.379 5.379 11 C 0.041 3.959 12 H 0.108 0.892 13 C -0.162 4.162 14 C -0.148 4.148 15 C -0.141 4.141 16 H 0.102 0.898 17 C 0.009 3.991 18 F -0.198 7.198 19 C -0.152 4.152 20 C -0.166 4.166 21 C 0.005 3.995 22 C -0.148 4.148 23 C -0.116 4.116 24 C -0.165 4.165 25 C -0.084 4.084 26 C -0.091 4.091 27 H 0.224 0.776 28 H 0.127 0.873 29 H -0.179 1.179 30 H -0.181 1.181 31 H 0.188 0.812 32 H 0.135 0.865 33 H 0.140 0.860 34 H 0.235 0.765 35 H 0.092 0.908 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.093 0.907 41 H 0.086 0.914 42 H 0.092 0.908 43 H 0.084 0.916 44 H 0.088 0.912 45 H 0.132 0.868 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.456 4.520 -4.466 7.761 hybrid contribution 0.618 -0.643 -0.225 0.919 sum 5.074 3.878 -4.691 7.923 Atomic orbital electron populations 1.86490 1.17429 1.81834 1.48950 1.24329 0.84790 1.08743 0.96224 0.95255 0.80626 0.77885 0.87831 1.20643 1.09601 0.92409 0.97867 1.21501 1.01262 0.93771 0.89111 1.43193 1.53925 1.04640 1.13173 1.21595 0.94624 1.05923 0.81400 1.20990 0.90782 0.77158 0.83519 1.90816 1.19825 1.46978 1.80866 1.46049 1.11059 1.73950 1.06836 1.21050 0.91321 0.96187 0.87297 0.89176 1.21776 0.99137 1.00323 0.94997 1.21441 0.99150 0.95714 0.98492 1.21834 0.99120 0.97160 0.96022 0.89836 1.22059 0.99284 0.80104 0.97666 1.92775 1.95016 1.40751 1.91250 1.21530 0.98363 1.00817 0.94452 1.21894 0.99227 0.96565 0.98922 1.18158 1.01398 0.85840 0.94139 1.19949 1.05316 0.89290 1.00272 1.20827 0.98365 0.97951 0.94449 1.20669 1.02423 0.96943 0.96442 1.20307 0.97899 0.90961 0.99269 1.18944 1.03173 0.92820 0.94171 0.77559 0.87267 1.17888 1.18050 0.81237 0.86547 0.85964 0.76486 0.90802 0.91080 0.91039 0.90767 0.90673 0.90662 0.91359 0.90817 0.91635 0.91181 0.86787 0.85742 0.85940 0.85983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.31 12.88 -35.23 -0.45 -1.77 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.33 30.75 -169.99 -5.23 -5.56 16 4 C -0.20 -0.49 5.58 -102.71 -0.57 -1.06 16 5 C 0.07 0.04 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.52 2.27 -115.70 -0.26 -0.78 16 7 C 0.09 -0.25 6.48 -5.19 -0.03 -0.28 16 8 C 0.49 -0.26 7.86 -10.98 -0.09 -0.35 16 9 O -0.51 -2.28 16.08 5.55 0.09 -2.19 16 10 N -0.73 2.32 5.08 -53.80 -0.27 2.05 16 11 C 0.15 -0.31 2.45 -67.93 -0.17 -0.48 16 12 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 13 C -0.12 0.50 5.39 -26.73 -0.14 0.36 16 14 C -0.11 0.41 5.20 -26.73 -0.14 0.27 16 15 C -0.12 0.29 2.51 -90.62 -0.23 0.07 16 16 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 17 C 0.06 -0.11 6.96 37.16 0.26 0.15 16 18 F -0.22 -0.43 16.84 2.25 0.04 -0.39 16 19 C -0.11 0.12 5.08 -26.73 -0.14 -0.02 16 20 C -0.13 0.14 5.49 -26.73 -0.15 -0.01 16 21 C 0.11 0.39 6.80 -83.99 -0.57 -0.19 16 22 C -0.13 -0.35 10.00 -39.43 -0.39 -0.74 16 23 C -0.10 -0.24 10.01 -39.54 -0.40 -0.63 16 24 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 25 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 26 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 27 H 0.38 -0.40 8.70 45.56 0.40 0.00 16 28 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 29 H -0.25 -0.71 7.11 56.52 0.40 -0.30 16 30 H -0.26 -0.39 7.11 56.52 0.40 0.02 16 31 H 0.17 -0.51 6.34 -52.49 -0.33 -0.84 16 32 H 0.12 -0.53 8.14 -51.92 -0.42 -0.95 16 33 H 0.12 -0.74 8.12 -51.93 -0.42 -1.16 16 34 H 0.40 -2.49 8.60 -40.82 -0.35 -2.84 16 35 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 36 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 37 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.07 -0.19 8.14 -51.92 -0.42 -0.62 16 40 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.07 0.01 7.80 -51.93 -0.41 -0.40 16 43 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 45 H 0.11 0.09 8.06 -52.49 -0.42 -0.33 16 46 H 0.12 0.04 8.06 -52.48 -0.42 -0.39 16 47 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 48 H 0.12 0.38 8.06 -52.48 -0.42 -0.04 16 LS Contribution 394.16 15.07 5.94 5.94 Total: 0.00 -10.56 394.16 -11.89 -22.44 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -7.46 Total: -14.25 kcal Atomic # 6 Polarization: -1.23 SS G_CDS: -4.28 Total: -5.50 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -0.54 Total: 1.27 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.36 Total: -3.96 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.39 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.23 Total: -5.56 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -10.56 -11.89 -22.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.783 kcal (2) G-P(sol) polarization free energy of solvation -10.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds