Wall clock time and date at job start Sun Mar 7 2021 11:41:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35661 * 116.99643 * 2 1 4 4 C 1.38403 * 120.12214 * 0.02562 * 3 2 1 5 5 C 1.38727 * 120.03232 * 179.71963 * 4 3 2 6 6 O 1.35709 * 119.86188 * 180.25579 * 5 4 3 7 7 C 1.42904 * 117.00131 * 359.97438 * 6 5 4 8 8 C 1.39138 * 120.26921 * 0.27395 * 5 4 3 9 9 C 1.50706 * 119.87282 * 179.97438 * 8 5 4 10 10 O 1.42898 * 109.47092 * 284.99942 * 9 8 5 11 11 Si 1.86305 * 109.46624 * 165.00352 * 9 8 5 12 12 C 1.37582 * 120.24543 * 359.97438 * 8 5 4 13 13 C 1.39818 * 119.96306 * 0.02562 * 12 8 5 14 14 C 1.47306 * 120.13346 * 179.97438 * 13 12 8 15 15 O 1.21620 * 119.99725 * 180.02562 * 14 13 12 16 16 N 1.34771 * 120.00148 * 359.97438 * 14 13 12 17 17 C 1.46502 * 120.00124 * 179.97438 * 16 14 13 18 18 H 1.08995 * 112.84590 * 23.81232 * 17 16 14 19 19 C 1.53780 * 113.61442 * 155.00177 * 17 16 14 20 20 C 1.53782 * 87.07905 * 139.98577 * 19 17 16 21 21 O 1.42894 * 113.61821 * 89.11790 * 20 19 17 22 22 C 1.42899 * 113.99735 * 65.21909 * 21 20 19 23 23 C 1.53003 * 113.61192 * 219.93872 * 20 19 17 24 24 F 1.39896 * 109.47532 * 65.17695 * 23 20 19 25 25 F 1.39904 * 109.47019 * 185.17652 * 23 20 19 26 26 F 1.39899 * 109.47316 * 305.17017 * 23 20 19 27 27 C 1.53773 * 113.61824 * 252.50456 * 17 16 14 28 28 H 1.08994 * 109.47174 * 299.99437 * 1 2 3 29 29 H 1.09000 * 109.46903 * 60.00213 * 1 2 3 30 30 H 1.09000 * 109.46548 * 179.97438 * 1 2 3 31 31 H 1.08002 * 119.98073 * 359.97438 * 4 3 2 32 32 H 1.08992 * 109.47675 * 300.00232 * 7 6 5 33 33 H 1.09004 * 109.46841 * 60.00904 * 7 6 5 34 34 H 1.09001 * 109.47147 * 180.02562 * 7 6 5 35 35 H 1.08999 * 109.47607 * 45.00331 * 9 8 5 36 36 H 0.96698 * 114.00309 * 60.00051 * 10 9 8 37 37 H 1.48507 * 109.99701 * 178.68000 * 11 9 8 38 38 H 1.48501 * 109.99945 * 299.99474 * 11 9 8 39 39 H 1.07996 * 120.01921 * 179.97438 * 12 8 5 40 40 H 0.97002 * 120.00045 * 0.02562 * 16 14 13 41 41 H 1.08994 * 113.61820 * 254.53373 * 19 17 16 42 42 H 1.09005 * 113.61091 * 25.35568 * 19 17 16 43 43 H 1.09005 * 109.47593 * 303.58325 * 22 21 20 44 44 H 1.09002 * 109.47669 * 63.58566 * 22 21 20 45 45 H 1.09007 * 109.47086 * 183.58763 * 22 21 20 46 46 H 1.09005 * 113.61265 * 334.56746 * 27 17 16 47 47 H 1.08998 * 113.62104 * 105.46848 * 27 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2935 2.3711 0.0005 5 6 1.9251 3.6062 0.0064 6 8 1.1850 4.7437 0.0122 7 6 -0.2361 4.5930 0.0112 8 6 3.3144 3.6835 0.0060 9 6 3.9913 5.0299 0.0119 10 8 3.8930 5.6181 -1.2867 11 14 5.7863 4.8205 0.4645 12 6 4.0723 2.5353 0.0004 13 6 3.4461 1.2852 -0.0056 14 6 4.2539 0.0534 -0.0122 15 8 3.7066 -1.0327 -0.0179 16 7 5.5995 0.1300 -0.0131 17 6 6.4029 -1.0951 -0.0191 18 1 5.8662 -1.9511 -0.4279 19 6 7.8081 -0.9072 -0.6150 20 6 8.3204 -1.8281 0.5050 21 8 8.3047 -3.2143 0.1584 22 6 9.1986 -3.5584 -0.9020 23 6 9.6552 -1.3805 1.1040 24 9 9.4873 -0.1516 1.7511 25 9 10.0968 -2.3362 2.0254 26 9 10.6022 -1.2445 0.0832 27 6 7.0962 -1.3838 1.3227 28 1 -0.3633 0.5137 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3632 -1.0277 -0.0005 31 1 0.2148 2.3164 0.0005 32 1 -0.5432 4.0483 -0.8815 33 1 -0.5433 4.0393 0.8985 34 1 -0.7057 5.5767 0.0158 35 1 3.5057 5.6776 0.7418 36 1 2.9847 5.7567 -1.5881 37 1 6.4726 6.1373 0.4427 38 1 5.9021 4.2097 1.8131 39 1 5.1504 2.5995 -0.0003 40 1 6.0360 0.9962 -0.0090 41 1 7.9192 -1.3304 -1.6133 42 1 8.1788 0.1154 -0.5451 43 1 8.9712 -2.9534 -1.7798 44 1 10.2252 -3.3704 -0.5874 45 1 9.0814 -4.6138 -1.1480 46 1 7.2729 -0.4917 1.9237 47 1 6.6326 -2.1917 1.8889 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:41:36 Heat of formation + Delta-G solvation = -263.508509 kcal Electronic energy + Delta-G solvation = -38635.820610 eV Core-core repulsion = 32952.255471 eV Total energy + Delta-G solvation = -5683.565139 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -51.20919 -48.73327 -48.68339 -42.16855 -41.42814 -40.33744 -39.69463 -38.39228 -37.27743 -36.98842 -34.36286 -32.24169 -31.72545 -29.05928 -28.97211 -28.14233 -28.02159 -26.73051 -26.10230 -25.08203 -23.73799 -22.68823 -21.61319 -21.23185 -20.04873 -19.67145 -19.49223 -19.21125 -18.67187 -18.53737 -17.77277 -17.34687 -17.18273 -17.11757 -16.67002 -16.60673 -16.45471 -16.20650 -15.81612 -15.77105 -15.72351 -15.56976 -15.53825 -15.51152 -15.16188 -15.09134 -14.85268 -14.81676 -14.52954 -14.32464 -14.20545 -14.07608 -13.69236 -13.50100 -13.39117 -13.22161 -13.03196 -12.68320 -12.61929 -12.56609 -12.52662 -12.44281 -12.17154 -11.68610 -11.66759 -11.35444 -11.25866 -10.98446 -10.83294 -10.16908 -9.93055 -9.20657 -4.94922 -0.28964 0.07776 1.37574 1.50098 1.61522 1.72696 2.00130 2.05134 2.08094 2.15025 2.17983 2.56320 2.60928 2.67860 2.90321 3.31471 3.44380 3.46465 3.52349 3.58424 3.69043 3.73198 3.94422 4.05296 4.10926 4.17041 4.22515 4.26687 4.27528 4.29531 4.30514 4.33090 4.36151 4.47138 4.49859 4.63651 4.66398 4.67413 4.74816 4.76677 4.85075 4.87570 4.95928 5.01201 5.27086 5.42188 5.77168 5.97652 6.25933 6.52441 6.62142 7.23653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.303 6.303 3 C 0.216 3.784 4 C -0.307 4.307 5 C 0.205 3.795 6 O -0.318 6.318 7 C 0.013 3.987 8 C -0.200 4.200 9 C -0.075 4.075 10 O -0.546 6.546 11 Si 0.801 3.199 12 C 0.010 3.990 13 C -0.224 4.224 14 C 0.568 3.432 15 O -0.559 6.559 16 N -0.707 5.707 17 C 0.143 3.857 18 H 0.111 0.889 19 C -0.149 4.149 20 C 0.042 3.958 21 O -0.350 6.350 22 C 0.005 3.995 23 C 0.438 3.562 24 F -0.172 7.172 25 F -0.188 7.188 26 F -0.181 7.181 27 C -0.134 4.134 28 H 0.070 0.930 29 H 0.072 0.928 30 H 0.113 0.887 31 H 0.164 0.836 32 H 0.071 0.929 33 H 0.067 0.933 34 H 0.122 0.878 35 H 0.070 0.930 36 H 0.374 0.626 37 H -0.296 1.296 38 H -0.253 1.253 39 H 0.167 0.833 40 H 0.416 0.584 41 H 0.113 0.887 42 H 0.135 0.865 43 H 0.072 0.928 44 H 0.047 0.953 45 H 0.110 0.890 46 H 0.128 0.872 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.365 3.094 -2.716 5.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.214 6.214 3 C 0.167 3.833 4 C -0.327 4.327 5 C 0.157 3.843 6 O -0.230 6.230 7 C -0.081 4.081 8 C -0.201 4.201 9 C -0.182 4.182 10 O -0.353 6.353 11 Si 0.702 3.298 12 C -0.008 4.008 13 C -0.228 4.228 14 C 0.357 3.643 15 O -0.438 6.438 16 N -0.360 5.360 17 C 0.038 3.962 18 H 0.129 0.871 19 C -0.187 4.187 20 C -0.002 4.002 21 O -0.268 6.268 22 C -0.090 4.090 23 C 0.383 3.617 24 F -0.154 7.154 25 F -0.170 7.170 26 F -0.162 7.162 27 C -0.173 4.173 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.131 0.869 31 H 0.182 0.818 32 H 0.090 0.910 33 H 0.086 0.914 34 H 0.140 0.860 35 H 0.087 0.913 36 H 0.222 0.778 37 H -0.223 1.223 38 H -0.178 1.178 39 H 0.183 0.817 40 H 0.254 0.746 41 H 0.131 0.869 42 H 0.153 0.847 43 H 0.091 0.909 44 H 0.065 0.935 45 H 0.128 0.872 46 H 0.146 0.854 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.479 2.370 -2.028 3.984 hybrid contribution -1.529 0.967 0.504 1.878 sum -4.007 3.337 -1.524 5.433 Atomic orbital electron populations 1.23474 0.76518 1.05786 1.02630 1.86370 1.23192 1.25827 1.86006 1.18988 0.91123 0.84766 0.88453 1.21413 1.02047 0.90723 1.18469 1.18899 0.90661 0.85172 0.89546 1.86035 1.21412 1.28659 1.86911 1.23481 0.75832 1.06042 1.02729 1.19559 0.90769 0.96931 1.12834 1.25467 1.14260 0.90284 0.88199 1.86683 1.33001 1.83258 1.32339 0.92672 0.72907 0.83120 0.81085 1.20861 0.99826 0.88813 0.91339 1.19151 0.90841 0.93785 1.19046 1.18010 0.82511 0.88275 0.75493 1.90837 1.72307 1.30166 1.50472 1.45658 1.05035 1.09912 1.75386 1.22085 0.89966 0.88811 0.95375 0.87087 1.24062 0.93881 1.01725 0.99023 1.23628 0.89797 0.86009 1.00734 1.88107 1.63136 1.20171 1.55358 1.23291 0.92602 1.03560 0.89548 1.21272 0.88347 0.75353 0.76708 1.93176 1.95422 1.44456 1.82310 1.93193 1.91108 1.64508 1.68147 1.93194 1.68084 1.95642 1.59273 1.23798 0.91540 1.03515 0.98407 0.91098 0.90947 0.86917 0.81830 0.91004 0.91442 0.85980 0.91252 0.77777 1.22296 1.17781 0.81671 0.74564 0.86888 0.84708 0.90900 0.93474 0.87167 0.85357 0.89282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.30 -2.12 8.56 -68.81 -0.59 -2.71 16 3 C 0.22 1.01 6.70 22.82 0.15 1.16 16 4 C -0.31 0.01 8.01 22.43 0.18 0.19 16 5 C 0.20 0.07 6.62 22.60 0.15 0.22 16 6 O -0.32 0.53 9.36 -90.30 -0.84 -0.31 16 7 C 0.01 -0.11 9.80 113.37 1.11 1.01 16 8 C -0.20 -0.04 5.27 -19.80 -0.10 -0.15 16 9 C -0.07 -0.01 2.32 71.24 0.17 0.16 16 10 O -0.55 -0.84 12.65 -148.98 -1.89 -2.72 16 11 Si 0.80 -2.07 30.16 68.60 2.07 0.00 16 12 C 0.01 -0.01 8.14 22.50 0.18 0.17 16 13 C -0.22 -0.80 5.89 -20.00 -0.12 -0.92 16 14 C 0.57 3.26 7.76 86.63 0.67 3.93 16 15 O -0.56 -8.04 14.75 16.87 0.25 -7.79 16 16 N -0.71 1.52 5.30 -443.43 -2.35 -0.83 16 17 C 0.14 -0.23 4.17 45.51 0.19 -0.04 16 18 H 0.11 0.35 7.46 -2.39 -0.02 0.34 16 19 C -0.15 0.92 6.66 31.12 0.21 1.13 16 20 C 0.04 -0.04 0.85 -10.27 -0.01 -0.05 16 21 O -0.35 -0.74 10.33 -148.98 -1.54 -2.28 16 22 C 0.01 -0.01 10.32 113.37 1.17 1.16 16 23 C 0.44 0.61 2.52 71.98 0.18 0.79 16 24 F -0.17 -0.05 15.83 44.97 0.71 0.66 16 25 F -0.19 -1.14 17.10 44.97 0.77 -0.37 16 26 F -0.18 -0.23 15.39 44.97 0.69 0.47 16 27 C -0.13 0.17 7.13 31.12 0.22 0.40 16 28 H 0.07 -0.39 7.66 -2.39 -0.02 -0.41 16 29 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 30 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 31 H 0.16 -0.84 4.50 -2.91 -0.01 -0.85 16 32 H 0.07 -0.72 7.65 -2.39 -0.02 -0.73 16 33 H 0.07 -0.63 7.65 -2.39 -0.02 -0.65 16 34 H 0.12 -1.36 8.14 -2.39 -0.02 -1.38 16 35 H 0.07 0.06 7.82 -2.39 -0.02 0.04 16 36 H 0.37 -0.80 8.59 -74.06 -0.64 -1.44 16 37 H -0.30 -1.44 7.11 99.48 0.71 -0.73 16 38 H -0.25 0.32 7.11 99.48 0.71 1.03 16 39 H 0.17 -1.38 3.43 -2.91 -0.01 -1.39 16 40 H 0.42 -3.78 6.75 -92.71 -0.63 -4.41 16 41 H 0.11 -0.90 6.67 -2.39 -0.02 -0.92 16 42 H 0.13 -1.48 8.04 -2.38 -0.02 -1.50 16 43 H 0.07 -0.44 6.58 -2.38 -0.02 -0.46 16 44 H 0.05 -0.07 6.63 -2.39 -0.02 -0.08 16 45 H 0.11 -0.50 8.14 -2.38 -0.02 -0.52 16 46 H 0.13 -0.54 7.02 -2.38 -0.02 -0.56 16 47 H 0.09 0.13 8.14 -2.39 -0.02 0.11 16 Total: 0.00 -23.67 392.26 2.61 -21.06 By element: Atomic # 1 Polarization: -15.27 SS G_CDS: -0.14 Total: -15.41 kcal Atomic # 6 Polarization: 4.77 SS G_CDS: 5.47 Total: 10.24 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -2.35 Total: -0.83 kcal Atomic # 8 Polarization: -11.20 SS G_CDS: -4.61 Total: -15.81 kcal Atomic # 9 Polarization: -1.42 SS G_CDS: 2.17 Total: 0.76 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: 2.07 Total: 0.00 kcal Total: -23.67 2.61 -21.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -242.448 kcal (2) G-P(sol) polarization free energy of solvation -23.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.060 kcal (6) G-S(sol) free energy of system = (1) + (5) -263.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds