Wall clock time and date at job start Sun Mar 7 2021 11:41:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42898 * 114.00391 * 2 1 4 4 C 1.52997 * 112.84615 * 294.00746 * 3 2 1 5 5 F 1.39901 * 109.47180 * 196.39613 * 4 3 2 6 6 F 1.39896 * 109.47652 * 316.39625 * 4 3 2 7 7 F 1.39904 * 109.46877 * 76.39873 * 4 3 2 8 8 C 1.53954 * 113.53559 * 162.70273 * 3 2 1 9 9 C 1.53780 * 87.02078 * 270.80735 * 8 3 2 10 10 H 1.09001 * 113.61278 * 89.23016 * 9 8 3 11 11 N 1.46493 * 113.61738 * 220.04841 * 9 8 3 12 12 C 1.34771 * 120.00267 * 254.13714 * 11 9 8 13 13 O 1.21275 * 120.00150 * 0.02562 * 12 11 9 14 14 C 1.50704 * 120.00261 * 180.02562 * 12 11 9 15 15 C 1.50693 * 109.47519 * 180.02562 * 14 12 11 16 16 C 1.38237 * 120.00012 * 269.72598 * 15 14 12 17 17 C 1.38232 * 120.00336 * 180.31896 * 16 15 14 18 18 C 1.38233 * 119.99969 * 359.93298 * 17 16 15 19 19 C 1.50695 * 120.00226 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.46938 * 245.01832 * 19 18 17 21 21 Si 1.86304 * 109.47119 * 5.01807 * 19 18 17 22 22 C 1.38241 * 120.00096 * 0.06246 * 18 17 16 23 23 C 1.38231 * 120.00262 * 89.99706 * 15 14 12 24 24 C 1.53777 * 113.61643 * 65.20712 * 3 2 1 25 25 H 1.08999 * 109.46771 * 63.53534 * 1 2 3 26 26 H 1.08997 * 109.47376 * 183.53569 * 1 2 3 27 27 H 1.09003 * 109.46975 * 303.53531 * 1 2 3 28 28 H 1.09003 * 113.61054 * 156.28845 * 8 3 2 29 29 H 1.08996 * 113.66866 * 25.34008 * 8 3 2 30 30 H 0.97007 * 120.00151 * 74.14013 * 11 9 8 31 31 H 1.08999 * 109.46963 * 59.99888 * 14 12 11 32 32 H 1.09002 * 109.47166 * 300.00289 * 14 12 11 33 33 H 1.08001 * 119.99910 * 0.25524 * 16 15 14 34 34 H 1.07999 * 120.00242 * 179.97438 * 17 16 15 35 35 H 1.09003 * 109.47607 * 125.02053 * 19 18 17 36 36 H 0.96699 * 114.00419 * 60.00038 * 20 19 18 37 37 H 1.48493 * 109.99801 * 58.68166 * 21 19 18 38 38 H 1.48504 * 109.99747 * 180.02562 * 21 19 18 39 39 H 1.07999 * 120.00294 * 179.97438 * 22 18 17 40 40 H 1.08001 * 120.00187 * 359.72539 * 23 15 14 41 41 H 1.09002 * 113.61346 * 334.57128 * 24 3 2 42 42 H 1.09001 * 113.69074 * 203.67620 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7279 2.0814 -1.2880 5 9 2.6095 3.1635 -1.3833 6 9 1.9050 1.2373 -2.3895 7 9 0.4109 2.5531 -1.2689 8 6 3.4915 1.3188 0.4197 9 6 2.9970 1.4823 1.8666 10 1 2.8230 0.5357 2.3782 11 7 3.7989 2.4180 2.6586 12 6 4.6454 1.9523 3.5982 13 8 4.7436 0.7584 3.7877 14 6 5.4700 2.9149 4.4134 15 6 6.3269 2.1448 5.3848 16 6 5.8483 1.8537 6.6485 17 6 6.6369 1.1530 7.5419 18 6 7.9036 0.7422 7.1710 19 6 8.7631 -0.0222 8.1446 20 8 9.9121 0.7583 8.4802 21 14 7.7838 -0.3813 9.6883 22 6 8.3822 1.0332 5.9071 23 6 7.5938 1.7343 5.0140 24 6 1.7212 2.1085 1.2791 25 1 -0.3633 0.4580 -0.9200 26 1 -0.3634 -1.0257 0.0634 27 1 -0.3633 0.5678 0.8566 28 1 4.0431 2.1817 0.0466 29 1 4.0062 0.3753 0.2381 30 1 3.7206 3.3730 2.5069 31 1 4.8086 3.5844 4.9635 32 1 6.1082 3.4988 3.7502 33 1 4.8587 2.1746 6.9383 34 1 6.2631 0.9259 8.5293 35 1 9.0813 -0.9602 7.6897 36 1 9.7038 1.6089 8.8903 37 1 6.5694 -1.1653 9.3484 38 1 8.6207 -1.1343 10.6568 39 1 9.3720 0.7126 5.6175 40 1 7.9677 1.9617 4.0267 41 1 0.8088 1.8016 1.7905 42 1 1.7874 3.1880 1.1429 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:41:43 Heat of formation + Delta-G solvation = -201.250666 kcal Electronic energy + Delta-G solvation = -30414.014192 eV Core-core repulsion = 25526.050759 eV Total energy + Delta-G solvation = -4887.963433 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.122 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -51.28360 -48.80990 -48.75767 -41.67902 -40.81559 -39.86357 -37.69678 -37.29050 -34.44498 -33.83524 -31.91544 -30.02020 -28.78214 -28.12861 -26.81376 -25.89239 -23.96815 -23.79188 -22.23272 -21.49918 -21.15285 -19.77000 -19.56790 -19.26765 -18.43577 -18.08813 -17.44784 -17.13470 -16.74703 -16.60375 -16.45098 -16.25832 -15.92920 -15.82254 -15.64673 -15.59459 -15.48935 -15.19170 -14.98752 -14.92767 -14.86027 -14.69867 -14.61375 -14.41620 -14.08342 -13.75931 -13.37018 -13.26201 -13.12325 -13.01536 -12.79389 -12.67374 -12.52508 -12.25065 -11.99621 -11.76409 -11.70060 -11.09685 -10.92936 -10.43716 -10.16546 -9.85528 -9.60087 -5.03705 0.25652 0.47331 1.29805 1.43873 1.60425 1.62558 1.94082 2.04883 2.15697 2.52493 2.59182 2.77824 2.86429 3.24305 3.38493 3.50134 3.51745 3.65417 3.80425 3.93122 3.95952 4.07801 4.09005 4.22023 4.25850 4.37929 4.38414 4.42671 4.48993 4.50083 4.58283 4.65759 4.69738 4.74539 4.78957 4.85740 5.05330 5.10962 5.39583 5.40518 5.55704 5.61115 5.69671 6.03948 6.53472 6.76806 7.25818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.351 6.351 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.173 7.173 6 F -0.188 7.188 7 F -0.181 7.181 8 C -0.132 4.132 9 C 0.142 3.858 10 H 0.104 0.896 11 N -0.707 5.707 12 C 0.515 3.485 13 O -0.578 6.578 14 C -0.098 4.098 15 C -0.071 4.071 16 C -0.109 4.109 17 C -0.123 4.123 18 C -0.129 4.129 19 C -0.076 4.076 20 O -0.555 6.555 21 Si 0.782 3.218 22 C -0.110 4.110 23 C -0.116 4.116 24 C -0.146 4.146 25 H 0.047 0.953 26 H 0.110 0.890 27 H 0.072 0.928 28 H 0.128 0.872 29 H 0.085 0.915 30 H 0.422 0.578 31 H 0.138 0.862 32 H 0.132 0.868 33 H 0.145 0.855 34 H 0.143 0.857 35 H 0.099 0.901 36 H 0.395 0.605 37 H -0.292 1.292 38 H -0.299 1.299 39 H 0.120 0.880 40 H 0.132 0.868 41 H 0.109 0.891 42 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.729 8.265 2.172 9.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.269 6.269 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.154 7.154 6 F -0.169 7.169 7 F -0.163 7.163 8 C -0.171 4.171 9 C 0.036 3.964 10 H 0.122 0.878 11 N -0.360 5.360 12 C 0.304 3.696 13 O -0.456 6.456 14 C -0.137 4.137 15 C -0.072 4.072 16 C -0.127 4.127 17 C -0.140 4.140 18 C -0.130 4.130 19 C -0.186 4.186 20 O -0.363 6.363 21 Si 0.689 3.311 22 C -0.128 4.128 23 C -0.134 4.134 24 C -0.184 4.184 25 H 0.066 0.934 26 H 0.129 0.871 27 H 0.090 0.910 28 H 0.146 0.854 29 H 0.104 0.896 30 H 0.261 0.739 31 H 0.156 0.844 32 H 0.150 0.850 33 H 0.162 0.838 34 H 0.160 0.840 35 H 0.116 0.884 36 H 0.245 0.755 37 H -0.220 1.220 38 H -0.227 1.227 39 H 0.138 0.862 40 H 0.149 0.851 41 H 0.127 0.873 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.583 6.159 2.552 7.569 hybrid contribution -0.030 -0.073 -1.394 1.396 sum -3.613 6.087 1.158 7.172 Atomic orbital electron populations 1.23290 0.78493 1.05350 1.01847 1.88109 1.22323 1.22490 1.94022 1.23710 1.00241 0.86383 0.89992 1.21286 0.74299 0.78636 0.87471 1.93175 1.68814 1.56830 1.96579 1.93193 1.95016 1.71188 1.57540 1.93194 1.36932 1.89343 1.96814 1.23804 0.91144 1.05709 0.96415 1.21996 0.90275 0.94601 0.89535 0.87758 1.45790 1.41946 1.11015 1.37204 1.21116 0.79533 0.89360 0.79636 1.90765 1.67204 1.18911 1.68764 1.20784 0.98636 0.96849 0.97406 1.19593 0.94286 0.98599 0.94703 1.21263 1.00200 0.98051 0.93208 1.21162 0.93684 0.98902 1.00234 1.20395 0.95721 1.00700 0.96141 1.25190 0.92250 0.95993 1.05169 1.86461 1.30739 1.35815 1.83334 0.93766 0.75130 0.86445 0.75766 1.21093 0.99960 0.98417 0.93376 1.21245 0.94390 0.98097 0.99680 1.23990 1.00063 1.02118 0.92189 0.93450 0.87130 0.90953 0.85351 0.89647 0.73946 0.84414 0.85044 0.83755 0.84017 0.88363 0.75466 1.21977 1.22681 0.86200 0.85052 0.87255 0.85063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 113.37 1.17 1.16 16 2 O -0.35 -0.66 10.32 -148.98 -1.54 -2.20 16 3 C 0.04 -0.06 0.85 -10.21 -0.01 -0.07 16 4 C 0.44 0.40 2.52 71.98 0.18 0.59 16 5 F -0.17 0.05 15.84 44.97 0.71 0.76 16 6 F -0.19 -1.08 17.09 44.97 0.77 -0.32 16 7 F -0.18 -0.18 15.39 44.97 0.69 0.51 16 8 C -0.13 0.33 7.15 31.18 0.22 0.56 16 9 C 0.14 -0.53 4.15 45.52 0.19 -0.34 16 10 H 0.10 0.21 7.50 -2.39 -0.02 0.19 16 11 N -0.71 5.05 5.36 -440.06 -2.36 2.69 16 12 C 0.52 -0.65 7.82 87.66 0.69 0.04 16 13 O -0.58 -5.76 15.65 -3.01 -0.05 -5.81 16 14 C -0.10 0.73 5.83 29.10 0.17 0.90 16 15 C -0.07 0.02 4.37 -19.87 -0.09 -0.07 16 16 C -0.11 0.03 9.70 22.27 0.22 0.25 16 17 C -0.12 -0.09 8.67 22.27 0.19 0.11 16 18 C -0.13 -0.40 5.35 -19.87 -0.11 -0.51 16 19 C -0.08 -0.19 2.80 71.23 0.20 0.01 16 20 O -0.56 -1.28 12.83 -148.98 -1.91 -3.19 16 21 Si 0.78 0.01 29.80 68.60 2.04 2.05 16 22 C -0.11 -0.48 9.69 22.27 0.22 -0.26 16 23 C -0.12 -0.25 9.70 22.27 0.22 -0.03 16 24 C -0.15 1.07 6.66 31.12 0.21 1.28 16 25 H 0.05 -0.08 6.62 -2.39 -0.02 -0.09 16 26 H 0.11 -0.53 8.14 -2.39 -0.02 -0.54 16 27 H 0.07 -0.46 6.58 -2.39 -0.02 -0.48 16 28 H 0.13 -0.72 7.03 -2.39 -0.02 -0.74 16 29 H 0.08 0.08 8.14 -2.39 -0.02 0.06 16 30 H 0.42 -6.08 8.71 -92.70 -0.81 -6.88 16 31 H 0.14 -1.86 8.08 -2.39 -0.02 -1.87 16 32 H 0.13 -1.61 8.08 -2.39 -0.02 -1.63 16 33 H 0.14 -0.73 8.06 -2.91 -0.02 -0.75 16 34 H 0.14 -0.52 4.91 -2.91 -0.01 -0.53 16 35 H 0.10 0.46 7.96 -2.39 -0.02 0.44 16 36 H 0.40 -2.50 8.70 -74.06 -0.64 -3.15 16 37 H -0.29 -1.66 7.11 99.48 0.71 -0.96 16 38 H -0.30 -2.13 7.11 99.48 0.71 -1.42 16 39 H 0.12 0.50 8.06 -2.91 -0.02 0.47 16 40 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 41 H 0.11 -0.95 6.68 -2.39 -0.02 -0.96 16 42 H 0.13 -1.54 8.04 -2.39 -0.02 -1.55 16 Total: 0.00 -24.15 361.44 1.71 -22.44 By element: Atomic # 1 Polarization: -20.23 SS G_CDS: -0.32 Total: -20.55 kcal Atomic # 6 Polarization: -0.07 SS G_CDS: 3.66 Total: 3.60 kcal Atomic # 7 Polarization: 5.05 SS G_CDS: -2.36 Total: 2.69 kcal Atomic # 8 Polarization: -7.70 SS G_CDS: -3.50 Total: -11.19 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 2.17 Total: 0.96 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.04 Total: 2.05 kcal Total: -24.15 1.71 -22.44 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -178.810 kcal (2) G-P(sol) polarization free energy of solvation -24.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -202.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.441 kcal (6) G-S(sol) free energy of system = (1) + (5) -201.251 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds