Wall clock time and date at job start Sun Mar 7 2021 11:41:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42904 * 113.99748 * 2 1 4 4 C 1.53002 * 112.85361 * 294.02362 * 3 2 1 5 5 F 1.39895 * 109.47196 * 196.37271 * 4 3 2 6 6 F 1.39894 * 109.46914 * 316.37267 * 4 3 2 7 7 F 1.39901 * 109.46722 * 76.37173 * 4 3 2 8 8 C 1.53785 * 113.61135 * 162.71829 * 3 2 1 9 9 C 1.53785 * 87.08255 * 270.88467 * 8 3 2 10 10 H 1.08998 * 113.69212 * 89.12366 * 9 8 3 11 11 N 1.46493 * 113.61623 * 220.02254 * 9 8 3 12 12 C 1.34777 * 119.99763 * 252.49763 * 11 9 8 13 13 O 1.21584 * 120.00338 * 359.97438 * 12 11 9 14 14 C 1.47585 * 119.99905 * 180.02562 * 12 11 9 15 15 C 1.40196 * 119.83129 * 359.97030 * 14 12 11 16 16 C 1.36234 * 120.37591 * 180.02562 * 15 14 12 17 17 C 1.39869 * 119.96089 * 359.96647 * 16 15 14 18 18 C 1.40924 * 120.16980 * 0.03862 * 17 16 15 19 19 C 1.38647 * 119.49122 * 359.97438 * 18 17 16 20 20 N 1.37824 * 107.13032 * 180.02562 * 18 17 16 21 21 C 1.36568 * 109.85799 * 359.73411 * 20 18 17 22 22 C 1.34450 * 109.98278 * 0.45045 * 21 20 18 23 23 C 1.50707 * 126.48061 * 179.82951 * 22 21 20 24 24 O 1.42904 * 109.47088 * 104.68624 * 23 22 21 25 25 Si 1.86299 * 109.46987 * 344.69028 * 23 22 21 26 26 C 1.53782 * 113.61227 * 65.22045 * 3 2 1 27 27 H 1.08999 * 109.46916 * 303.58382 * 1 2 3 28 28 H 1.09000 * 109.47205 * 63.58121 * 1 2 3 29 29 H 1.08995 * 109.47195 * 183.57650 * 1 2 3 30 30 H 1.09002 * 113.60860 * 156.33976 * 8 3 2 31 31 H 1.08993 * 113.61349 * 25.43638 * 8 3 2 32 32 H 0.97003 * 120.00224 * 72.49258 * 11 9 8 33 33 H 1.08002 * 119.81603 * 0.02937 * 15 14 12 34 34 H 1.08006 * 120.01721 * 180.02562 * 16 15 14 35 35 H 1.07996 * 120.17345 * 179.97438 * 19 18 17 36 36 H 0.97001 * 125.07465 * 179.97438 * 20 18 17 37 37 H 1.08006 * 125.00506 * 180.30983 * 21 20 18 38 38 H 1.08999 * 109.47212 * 224.68481 * 23 22 21 39 39 H 0.96695 * 114.00174 * 300.00585 * 24 23 22 40 40 H 1.48499 * 110.00401 * 58.68314 * 25 23 22 41 41 H 1.48502 * 109.99928 * 180.02562 * 25 23 22 42 42 H 1.08994 * 113.61562 * 334.56878 * 26 3 2 43 43 H 1.09002 * 113.69002 * 203.67075 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7275 2.0818 -1.2878 5 9 2.6086 3.1643 -1.3827 6 9 1.9050 1.2380 -2.3894 7 9 0.4103 2.5529 -1.2686 8 6 3.4899 1.3210 0.4186 9 6 2.9973 1.4822 1.8665 10 1 2.8235 0.5355 2.3779 11 7 3.7993 2.4179 2.6585 12 6 4.6232 1.9539 3.6188 13 8 4.7005 0.7587 3.8282 14 6 5.4307 2.8965 4.4172 15 6 5.3385 4.2740 4.1732 16 6 6.0792 5.1541 4.9031 17 6 6.9371 4.6841 5.9028 18 6 7.0382 3.3017 6.1571 19 6 6.2809 2.4130 5.4093 20 7 7.9463 3.1426 7.1815 21 6 8.4209 4.3615 7.5742 22 6 7.8465 5.3346 6.8456 23 6 8.0974 6.8153 6.9719 24 8 8.9145 7.2545 5.8849 25 14 8.9672 7.1625 8.5824 26 6 1.7212 2.1084 1.2793 27 1 -0.3633 0.5685 0.8561 28 1 -0.3633 0.4572 -0.9203 29 1 -0.3633 -1.0256 0.0641 30 1 4.0400 2.1851 0.0458 31 1 4.0054 0.3784 0.2352 32 1 3.7374 3.3715 2.4917 33 1 4.6764 4.6397 3.4022 34 1 6.0034 6.2141 4.7105 35 1 6.3501 1.3513 5.5946 36 1 8.2117 2.2917 7.5641 37 1 9.1485 4.5205 8.3564 38 1 7.1467 7.3480 6.9501 39 1 9.7780 6.8214 5.8420 40 1 10.2501 6.4168 8.6379 41 1 9.2198 8.6195 8.7194 42 1 0.8090 1.8014 1.7908 43 1 1.7874 3.1879 1.1432 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:41:47 Heat of formation + Delta-G solvation = -159.519697 kcal Electronic energy + Delta-G solvation = -33559.287107 eV Core-core repulsion = 28351.255072 eV Total energy + Delta-G solvation = -5208.032035 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.118 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -51.19049 -48.73883 -48.61887 -42.52422 -41.66495 -40.27564 -38.03115 -37.60808 -37.26938 -34.39819 -33.29566 -30.78618 -30.71712 -28.96183 -28.18297 -26.90528 -26.57363 -25.27489 -23.66321 -23.46635 -21.58813 -21.32354 -20.85662 -19.73122 -19.50473 -19.47197 -19.19319 -18.41885 -17.73289 -17.30421 -17.02976 -16.99013 -16.58025 -16.23364 -16.02852 -15.82172 -15.71295 -15.64634 -15.51845 -15.45121 -15.16183 -15.08457 -14.85737 -14.80925 -14.80625 -14.77084 -14.62694 -14.36293 -13.91031 -13.82904 -13.45356 -13.22261 -13.06815 -12.79689 -12.69106 -12.55163 -12.50361 -12.20813 -11.82522 -11.81319 -11.10186 -10.92823 -10.78949 -10.51684 -10.22411 -9.38976 -8.85118 -4.99767 -0.30038 0.36587 1.26271 1.32589 1.46051 1.51935 1.84006 1.89861 1.95824 2.00977 2.17130 2.51149 2.60035 2.80634 2.88769 3.25389 3.37344 3.44462 3.47923 3.54746 3.68324 3.72510 3.82780 3.88670 4.06731 4.08086 4.16957 4.24486 4.28916 4.32339 4.40152 4.44188 4.47691 4.53955 4.60631 4.70101 4.72527 4.80380 4.96110 5.19636 5.28827 5.40563 5.46624 5.58239 5.62808 5.95470 6.32493 6.38667 6.46563 7.15046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.330 6.330 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.175 7.175 6 F -0.172 7.172 7 F -0.181 7.181 8 C -0.132 4.132 9 C 0.142 3.858 10 H 0.132 0.868 11 N -0.717 5.717 12 C 0.567 3.433 13 O -0.533 6.533 14 C -0.123 4.123 15 C -0.113 4.113 16 C -0.071 4.071 17 C -0.062 4.062 18 C 0.081 3.919 19 C -0.055 4.055 20 N -0.583 5.583 21 C 0.075 3.925 22 C -0.206 4.206 23 C -0.038 4.038 24 O -0.531 6.531 25 Si 0.684 3.316 26 C -0.162 4.162 27 H 0.056 0.944 28 H 0.053 0.947 29 H 0.103 0.897 30 H 0.116 0.884 31 H 0.102 0.898 32 H 0.404 0.596 33 H 0.126 0.874 34 H 0.131 0.869 35 H 0.136 0.864 36 H 0.422 0.578 37 H 0.176 0.824 38 H 0.115 0.885 39 H 0.374 0.626 40 H -0.260 1.260 41 H -0.256 1.256 42 H 0.101 0.899 43 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.504 1.459 4.744 4.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.247 6.247 3 C 0.001 3.999 4 C 0.385 3.615 5 F -0.156 7.156 6 F -0.154 7.154 7 F -0.162 7.162 8 C -0.171 4.171 9 C 0.036 3.964 10 H 0.150 0.850 11 N -0.369 5.369 12 C 0.356 3.644 13 O -0.410 6.410 14 C -0.127 4.127 15 C -0.133 4.133 16 C -0.090 4.090 17 C -0.067 4.067 18 C -0.025 4.025 19 C -0.076 4.076 20 N -0.185 5.185 21 C -0.054 4.054 22 C -0.214 4.214 23 C -0.148 4.148 24 O -0.337 6.337 25 Si 0.585 3.415 26 C -0.201 4.201 27 H 0.075 0.925 28 H 0.071 0.929 29 H 0.121 0.879 30 H 0.134 0.866 31 H 0.121 0.879 32 H 0.240 0.760 33 H 0.144 0.856 34 H 0.149 0.851 35 H 0.154 0.846 36 H 0.260 0.740 37 H 0.193 0.807 38 H 0.133 0.867 39 H 0.221 0.779 40 H -0.185 1.185 41 H -0.181 1.181 42 H 0.119 0.881 43 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.111 1.023 5.210 5.311 hybrid contribution 0.463 0.172 -1.275 1.367 sum 0.351 1.196 3.935 4.127 Atomic orbital electron populations 1.23153 0.79367 1.04504 1.01463 1.88133 1.21209 1.21438 1.93949 1.23554 0.99934 0.86523 0.89853 1.21045 0.74343 0.78648 0.87449 1.93179 1.68928 1.56925 1.96574 1.93226 1.94920 1.70649 1.56567 1.93198 1.36807 1.89363 1.96824 1.23743 0.91298 1.06052 0.96004 1.22243 0.89249 0.94948 0.89932 0.85049 1.45799 1.43826 1.10483 1.36774 1.18194 0.79029 0.87994 0.79215 1.90808 1.65956 1.16083 1.68158 1.19381 1.00760 0.93310 0.99262 1.20679 1.00511 0.91638 1.00486 1.20206 0.94731 1.00065 0.93992 1.19171 0.98527 0.91427 0.97573 1.18078 0.96103 0.94842 0.93471 1.20077 0.94421 0.99190 0.93901 1.41727 1.36947 1.08709 1.31163 1.21831 0.99799 0.83615 1.00170 1.20674 1.03847 0.95401 1.01485 1.24294 0.99949 0.90842 0.99732 1.86611 1.31028 1.66967 1.49067 0.95164 0.82888 0.81727 0.81707 1.24015 1.00590 1.01317 0.94147 0.92546 0.92883 0.87860 0.86615 0.87894 0.75966 0.85633 0.85112 0.84569 0.73991 0.80686 0.86700 0.77871 1.18499 1.18054 0.88063 0.87280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.27 10.33 -35.23 -0.36 -0.63 16 3 C 0.04 -0.02 0.85 -89.80 -0.08 -0.09 16 4 C 0.44 0.41 2.52 37.16 0.09 0.51 16 5 F -0.17 -0.13 15.83 2.25 0.04 -0.10 16 6 F -0.17 -0.48 17.09 2.25 0.04 -0.45 16 7 F -0.18 -0.20 15.39 2.25 0.03 -0.16 16 8 C -0.13 0.11 7.13 -25.91 -0.18 -0.08 16 9 C 0.14 -0.13 4.17 -67.11 -0.28 -0.41 16 10 H 0.13 0.10 7.46 -51.93 -0.39 -0.29 16 11 N -0.72 0.78 5.30 -54.04 -0.29 0.49 16 12 C 0.57 1.09 7.76 -12.45 -0.10 0.99 16 13 O -0.53 -2.91 15.91 5.29 0.08 -2.83 16 14 C -0.12 -0.13 5.87 -104.95 -0.62 -0.75 16 15 C -0.11 0.06 9.46 -39.57 -0.37 -0.31 16 16 C -0.07 -0.02 10.03 -39.69 -0.40 -0.42 16 17 C -0.06 -0.07 6.35 -105.05 -0.67 -0.73 16 18 C 0.08 0.06 7.26 -84.00 -0.61 -0.55 16 19 C -0.05 -0.07 9.61 -39.03 -0.37 -0.45 16 20 N -0.58 1.00 6.07 -10.68 -0.06 0.94 16 21 C 0.07 -0.16 10.43 -16.78 -0.17 -0.33 16 22 C -0.21 0.09 5.57 -102.74 -0.57 -0.48 16 23 C -0.04 0.04 3.06 36.01 0.11 0.15 16 24 O -0.53 -0.40 12.88 -35.23 -0.45 -0.86 16 25 Si 0.68 -1.51 30.83 -169.99 -5.24 -6.75 16 26 C -0.16 0.39 6.66 -25.91 -0.17 0.21 16 27 H 0.06 -0.15 6.58 -51.93 -0.34 -0.49 16 28 H 0.05 -0.04 6.63 -51.93 -0.34 -0.39 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.12 -0.20 7.02 -51.93 -0.36 -0.56 16 31 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.40 -1.46 6.72 -40.82 -0.27 -1.73 16 33 H 0.13 -0.43 6.36 -52.49 -0.33 -0.76 16 34 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 35 H 0.14 0.16 7.62 -52.49 -0.40 -0.24 16 36 H 0.42 -1.84 8.96 -40.82 -0.37 -2.21 16 37 H 0.18 -0.83 6.28 -52.48 -0.33 -1.16 16 38 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 39 H 0.37 -0.75 8.70 45.56 0.40 -0.36 16 40 H -0.26 0.23 6.99 56.52 0.40 0.63 16 41 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 42 H 0.10 -0.31 6.67 -51.93 -0.35 -0.65 16 43 H 0.11 -0.41 8.04 -51.93 -0.42 -0.83 16 LS Contribution 370.11 15.07 5.58 5.58 Total: 0.00 -9.30 370.11 -8.38 -17.69 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -4.39 Total: -11.22 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -3.35 Total: -1.71 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -0.35 Total: 1.43 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.73 Total: -4.31 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.11 Total: -0.71 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.24 Total: -6.75 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -9.30 -8.38 -17.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.831 kcal (2) G-P(sol) polarization free energy of solvation -9.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.689 kcal (6) G-S(sol) free energy of system = (1) + (5) -159.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds