Wall clock time and date at job start Sun Mar 7 2021 11:42:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42909 * 114.00067 * 2 1 4 4 C 1.53002 * 112.84832 * 293.99166 * 3 2 1 5 5 F 1.39898 * 109.46825 * 195.95915 * 4 3 2 6 6 F 1.39897 * 109.46833 * 315.95701 * 4 3 2 7 7 F 1.39899 * 109.47196 * 75.96342 * 4 3 2 8 8 C 1.53951 * 113.61609 * 162.71744 * 3 2 1 9 9 C 1.53780 * 87.01987 * 270.80193 * 8 3 2 10 10 H 1.09003 * 113.61423 * 89.22552 * 9 8 3 11 11 N 1.46494 * 113.61649 * 220.04613 * 9 8 3 12 12 C 1.34780 * 120.00171 * 254.13910 * 11 9 8 13 13 O 1.21550 * 120.00063 * 359.97438 * 12 11 9 14 14 C 1.47844 * 119.99719 * 179.97438 * 12 11 9 15 15 C 1.39542 * 120.14330 * 359.97438 * 14 12 11 16 16 C 1.38071 * 119.84265 * 180.02562 * 15 14 12 17 17 Br 1.89096 * 119.94025 * 179.97438 * 16 15 14 18 18 C 1.38425 * 120.12390 * 0.02562 * 16 15 14 19 19 C 1.38364 * 120.28291 * 359.97438 * 18 16 15 20 20 C 1.50706 * 119.91855 * 180.02562 * 19 18 16 21 21 O 1.42897 * 109.46871 * 120.00337 * 20 19 18 22 22 Si 1.86292 * 109.47313 * 0.02562 * 20 19 18 23 23 C 1.37940 * 120.15749 * 359.72454 * 19 18 16 24 24 C 1.53777 * 87.17388 * 334.64054 * 9 8 3 25 25 H 1.09000 * 109.46787 * 184.83841 * 1 2 3 26 26 H 1.08999 * 109.46996 * 304.83593 * 1 2 3 27 27 H 1.08998 * 109.47313 * 64.83535 * 1 2 3 28 28 H 1.08990 * 113.61539 * 156.28214 * 8 3 2 29 29 H 1.09000 * 113.66703 * 25.32906 * 8 3 2 30 30 H 0.96997 * 120.00034 * 73.85989 * 11 9 8 31 31 H 1.07991 * 120.07946 * 359.97438 * 15 14 12 32 32 H 1.08007 * 119.85924 * 179.97438 * 18 16 15 33 33 H 1.09001 * 109.46736 * 240.00182 * 20 19 18 34 34 H 0.96707 * 113.99932 * 179.97438 * 21 20 19 35 35 H 1.48503 * 110.00160 * 298.67837 * 22 20 19 36 36 H 1.48498 * 110.00186 * 60.00091 * 22 20 19 37 37 H 1.07997 * 120.06445 * 180.27240 * 23 19 18 38 38 H 1.09000 * 113.62035 * 139.94215 * 24 9 8 39 39 H 1.09004 * 113.61398 * 270.75802 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7282 2.0815 -1.2882 5 9 2.6031 3.1693 -1.3783 6 9 1.9154 1.2399 -2.3899 7 9 0.4082 2.5447 -1.2740 8 6 3.4915 1.3211 0.4191 9 6 2.9974 1.4845 1.8661 10 1 2.8249 0.5378 2.3781 11 7 3.7984 2.4216 2.6575 12 6 4.6460 1.9572 3.5970 13 8 4.7454 0.7609 3.7879 14 6 5.4547 2.9030 4.3952 15 6 5.3433 4.2769 4.1781 16 6 6.1019 5.1546 4.9268 17 35 5.9537 7.0169 4.6345 18 6 6.9717 4.6737 5.8904 19 6 7.0863 3.3124 6.1099 20 6 8.0354 2.7979 7.1615 21 8 7.3044 2.0596 8.1426 22 14 8.8946 4.2345 7.9790 23 6 6.3294 2.4255 5.3729 24 6 1.7205 2.1087 1.2790 25 1 -0.3633 -1.0240 0.0867 26 1 -0.3633 0.5870 0.8435 27 1 -0.3634 0.4370 -0.9301 28 1 4.0419 2.1845 0.0456 29 1 4.0075 0.3782 0.2377 30 1 3.7218 3.3760 2.5027 31 1 4.6659 4.6528 3.4258 32 1 7.5634 5.3640 6.4733 33 1 8.7763 2.1483 6.6955 34 1 7.8531 1.6975 8.8518 35 1 9.6840 4.9923 6.9751 36 1 7.8948 5.1273 8.6182 37 1 6.4168 1.3635 5.5486 38 1 0.8087 1.8009 1.7908 39 1 1.7852 3.1882 1.1423 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:08 Heat of formation + Delta-G solvation = -186.448546 kcal Electronic energy + Delta-G solvation = -30886.762679 eV Core-core repulsion = 25815.160730 eV Total energy + Delta-G solvation = -5071.601949 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.017 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.29174 -48.82128 -48.76177 -41.95814 -41.08082 -39.81000 -37.65905 -37.42218 -34.78845 -33.78063 -33.00590 -30.61215 -29.15023 -28.14748 -27.05109 -26.83823 -25.88647 -23.65165 -22.78887 -21.69111 -21.33258 -19.82967 -19.57652 -19.29389 -18.92825 -18.46408 -17.87651 -17.57917 -17.15305 -16.65351 -16.58331 -16.20209 -16.06283 -15.83289 -15.64974 -15.59253 -15.31988 -15.21459 -15.15993 -14.94135 -14.92346 -14.89662 -14.61191 -14.39207 -14.20548 -13.78003 -13.59977 -13.35607 -13.15116 -12.78383 -12.71569 -12.61295 -12.48458 -12.18608 -11.95954 -11.79390 -11.64015 -11.30250 -11.01454 -10.60549 -10.38788 -10.19885 -9.99993 -4.98775 -0.66532 -0.27052 0.26873 1.21224 1.38727 1.39923 1.61392 1.86069 1.91423 2.04939 2.33618 2.50522 2.56953 2.78393 3.09790 3.20147 3.25631 3.34901 3.46489 3.59406 3.62826 3.76694 3.89064 3.94269 4.07843 4.20413 4.21898 4.25654 4.35064 4.38656 4.46962 4.56242 4.60473 4.67441 4.75784 4.78535 4.82151 4.96977 5.18388 5.27711 5.68275 6.24200 6.85876 6.92042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.348 6.348 3 C 0.043 3.957 4 C 0.438 3.562 5 F -0.173 7.173 6 F -0.186 7.186 7 F -0.181 7.181 8 C -0.132 4.132 9 C 0.140 3.860 10 H 0.116 0.884 11 N -0.699 5.699 12 C 0.568 3.432 13 O -0.561 6.561 14 C -0.132 4.132 15 C -0.044 4.044 16 C -0.100 4.100 17 Br -0.029 7.029 18 C -0.082 4.082 19 C -0.084 4.084 20 C -0.081 4.081 21 O -0.562 6.562 22 Si 0.768 3.232 23 C -0.024 4.024 24 C -0.149 4.149 25 H 0.112 0.888 26 H 0.072 0.928 27 H 0.047 0.953 28 H 0.127 0.873 29 H 0.093 0.907 30 H 0.417 0.583 31 H 0.169 0.831 32 H 0.132 0.868 33 H 0.102 0.898 34 H 0.407 0.593 35 H -0.280 1.280 36 H -0.290 1.290 37 H 0.142 0.858 38 H 0.113 0.887 39 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.378 1.674 3.111 3.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.266 6.266 3 C -0.001 4.001 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.168 7.168 7 F -0.163 7.163 8 C -0.170 4.170 9 C 0.035 3.965 10 H 0.134 0.866 11 N -0.351 5.351 12 C 0.355 3.645 13 O -0.440 6.440 14 C -0.136 4.136 15 C -0.064 4.064 16 C -0.180 4.180 17 Br 0.057 6.943 18 C -0.102 4.102 19 C -0.085 4.085 20 C -0.191 4.191 21 O -0.373 6.373 22 Si 0.672 3.328 23 C -0.043 4.043 24 C -0.187 4.187 25 H 0.130 0.870 26 H 0.090 0.910 27 H 0.065 0.935 28 H 0.146 0.854 29 H 0.112 0.888 30 H 0.256 0.744 31 H 0.187 0.813 32 H 0.149 0.851 33 H 0.120 0.880 34 H 0.259 0.741 35 H -0.207 1.207 36 H -0.218 1.218 37 H 0.160 0.840 38 H 0.132 0.868 39 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.067 2.394 2.749 3.799 hybrid contribution -0.622 0.108 -0.961 1.150 sum 0.445 2.502 1.789 3.108 Atomic orbital electron populations 1.23303 0.78456 1.05459 1.01819 1.88114 1.22318 1.22170 1.93996 1.23640 1.00129 0.86450 0.89849 1.21267 0.74299 0.78625 0.87494 1.93177 1.69248 1.56453 1.96605 1.93197 1.94877 1.71270 1.57435 1.93195 1.36643 1.89607 1.96830 1.23804 0.91310 1.06145 0.95745 1.22188 0.90159 0.94487 0.89637 0.86644 1.45686 1.41496 1.11218 1.36737 1.18192 0.79359 0.87425 0.79488 1.90818 1.67270 1.17212 1.68747 1.19928 1.00744 0.93157 0.99798 1.21487 0.96666 0.90765 0.97518 1.21704 1.02515 0.92145 1.01622 1.96840 1.97760 1.03699 1.96034 1.21206 0.97043 0.95332 0.96610 1.19616 0.98974 0.92043 0.97865 1.24831 0.96258 1.06231 0.91741 1.86438 1.38718 1.73092 1.39045 0.94083 0.80327 0.75237 0.83104 1.21317 0.91048 1.01218 0.90752 1.24024 1.00024 1.02171 0.92459 0.86958 0.90989 0.93476 0.85446 0.88819 0.74364 0.81344 0.85067 0.88003 0.74120 1.20688 1.21768 0.83994 0.86846 0.85233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.30 113.37 1.17 1.15 16 2 O -0.35 -0.47 10.34 -148.98 -1.54 -2.01 16 3 C 0.04 -0.07 0.84 -10.21 -0.01 -0.08 16 4 C 0.44 0.49 2.52 71.98 0.18 0.67 16 5 F -0.17 -0.04 15.82 44.97 0.71 0.67 16 6 F -0.19 -1.05 17.10 44.97 0.77 -0.28 16 7 F -0.18 -0.23 15.40 44.97 0.69 0.46 16 8 C -0.13 0.32 7.15 31.18 0.22 0.54 16 9 C 0.14 -0.41 4.15 45.52 0.19 -0.22 16 10 H 0.12 0.16 7.50 -2.39 -0.02 0.14 16 11 N -0.70 2.59 5.31 -442.92 -2.35 0.23 16 12 C 0.57 1.88 7.77 86.79 0.67 2.55 16 13 O -0.56 -6.38 15.97 -3.87 -0.06 -6.45 16 14 C -0.13 -0.26 5.87 -20.09 -0.12 -0.38 16 15 C -0.04 0.07 9.28 22.54 0.21 0.28 16 16 C -0.10 -0.13 6.22 22.27 0.14 0.01 16 17 Br -0.03 -0.02 33.69 -20.37 -0.69 -0.70 16 18 C -0.08 -0.25 8.41 22.34 0.19 -0.06 16 19 C -0.08 -0.23 5.42 -19.90 -0.11 -0.34 16 20 C -0.08 0.18 2.81 71.24 0.20 0.38 16 21 O -0.56 0.86 12.73 -148.98 -1.90 -1.03 16 22 Si 0.77 -2.87 29.78 68.60 2.04 -0.82 16 23 C -0.02 -0.10 9.15 22.53 0.21 0.11 16 24 C -0.15 0.98 6.66 31.12 0.21 1.19 16 25 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 26 H 0.07 -0.47 6.55 -2.39 -0.02 -0.48 16 27 H 0.05 -0.08 6.69 -2.39 -0.02 -0.10 16 28 H 0.13 -0.64 7.03 -2.39 -0.02 -0.66 16 29 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.42 -4.10 6.75 -92.71 -0.63 -4.72 16 31 H 0.17 -1.43 6.40 -2.91 -0.02 -1.45 16 32 H 0.13 0.36 4.86 -2.91 -0.01 0.35 16 33 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 34 H 0.41 -4.90 8.74 -74.05 -0.65 -5.54 16 35 H -0.28 -0.29 7.11 99.48 0.71 0.41 16 36 H -0.29 -1.02 7.11 99.48 0.71 -0.32 16 37 H 0.14 0.77 7.65 -2.91 -0.02 0.75 16 38 H 0.11 -0.94 6.67 -2.39 -0.02 -0.95 16 39 H 0.13 -1.36 8.02 -2.38 -0.02 -1.38 16 Total: 0.00 -20.31 358.00 0.95 -19.35 By element: Atomic # 1 Polarization: -15.16 SS G_CDS: -0.07 Total: -15.23 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: 3.35 Total: 5.82 kcal Atomic # 7 Polarization: 2.59 SS G_CDS: -2.35 Total: 0.23 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -3.50 Total: -9.49 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 2.17 Total: 0.84 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.04 Total: -0.82 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.69 Total: -0.70 kcal Total: -20.31 0.95 -19.35 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.096 kcal (2) G-P(sol) polarization free energy of solvation -20.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds