Wall clock time and date at job start Sun Mar 7 2021 11:42:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52996 * 109.47491 * 2 1 4 4 C 1.53007 * 109.47096 * 67.11836 * 3 2 1 5 5 C 1.53003 * 109.47337 * 187.11947 * 3 2 1 6 6 C 1.50697 * 109.46703 * 63.10983 * 5 3 2 7 7 O 1.21288 * 119.99674 * 245.74343 * 6 5 3 8 8 N 1.34775 * 120.00686 * 65.74495 * 6 5 3 9 9 C 1.46501 * 120.00238 * 185.03711 * 8 6 5 10 10 H 1.08992 * 112.85015 * 23.80324 * 9 8 6 11 11 C 1.53773 * 113.61127 * 155.00187 * 9 8 6 12 12 C 1.53785 * 87.08348 * 139.98002 * 11 9 8 13 13 O 1.42906 * 113.61261 * 89.19588 * 12 11 9 14 14 C 1.42891 * 113.99872 * 65.18898 * 13 12 11 15 15 C 1.52992 * 113.61778 * 220.02084 * 12 11 9 16 16 F 1.39896 * 109.47453 * 64.99928 * 15 12 11 17 17 F 1.39898 * 109.46966 * 185.00120 * 15 12 11 18 18 F 1.39906 * 109.46976 * 304.99794 * 15 12 11 19 19 C 1.53785 * 87.07904 * 334.56766 * 12 11 9 20 20 N 1.46499 * 109.46964 * 303.10578 * 5 3 2 21 21 C 1.36344 * 125.63364 * 66.46052 * 20 5 3 22 22 C 1.34851 * 108.21518 * 179.83069 * 21 20 5 23 23 C 1.40888 * 107.41687 * 0.41822 * 22 21 20 24 24 C 1.34852 * 107.41903 * 359.74027 * 23 22 21 25 25 C 1.50704 * 125.89076 * 180.02562 * 24 23 22 26 26 O 1.42899 * 109.46995 * 209.97736 * 25 24 23 27 27 Si 1.86299 * 109.47153 * 329.97495 * 25 24 23 28 28 H 1.09000 * 109.46915 * 300.00383 * 1 2 3 29 29 H 1.08998 * 109.46881 * 59.99818 * 1 2 3 30 30 H 1.08995 * 109.47339 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.47377 * 239.99363 * 2 1 3 32 32 H 1.09009 * 109.46843 * 119.99688 * 2 1 3 33 33 H 1.08999 * 109.46970 * 307.12207 * 3 2 1 34 34 H 1.09004 * 109.46675 * 64.62449 * 4 3 2 35 35 H 1.09003 * 109.46954 * 184.62161 * 4 3 2 36 36 H 1.08995 * 109.47105 * 304.62235 * 4 3 2 37 37 H 1.08999 * 109.46853 * 183.10868 * 5 3 2 38 38 H 0.97006 * 119.99298 * 5.04265 * 8 6 5 39 39 H 1.09001 * 113.61906 * 254.52774 * 11 9 8 40 40 H 1.09001 * 113.61825 * 25.43350 * 11 9 8 41 41 H 1.09006 * 109.47031 * 65.20899 * 14 13 12 42 42 H 1.09000 * 109.47298 * 185.20883 * 14 13 12 43 43 H 1.09001 * 109.47530 * 305.21075 * 14 13 12 44 44 H 1.09001 * 113.61500 * 270.88428 * 19 12 11 45 45 H 1.08992 * 113.61983 * 139.98047 * 19 12 11 46 46 H 1.07995 * 125.89061 * 359.97438 * 21 20 5 47 47 H 1.07997 * 126.29111 * 180.16199 * 22 21 20 48 48 H 1.08002 * 126.29242 * 179.73973 * 23 22 21 49 49 H 1.08996 * 109.47124 * 89.97394 * 25 24 23 50 50 H 0.96697 * 114.00168 * 180.02562 * 26 25 24 51 51 H 1.48506 * 110.00049 * 300.00055 * 27 25 24 52 52 H 1.48496 * 110.00172 * 61.31667 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 1.6813 2.1103 1.3290 5 6 3.5596 1.4461 -0.1788 6 6 3.9087 0.8576 -1.5214 7 8 4.5170 -0.1898 -1.5848 8 7 3.5452 1.4951 -2.6519 9 6 3.7862 0.8705 -3.9550 10 1 3.8651 -0.2150 -3.8960 11 6 2.8334 1.3599 -5.0582 12 6 4.0465 1.3455 -6.0033 13 8 4.2434 0.0931 -6.6628 14 6 3.1941 -0.2592 -7.5664 15 6 4.0897 2.5358 -6.9634 16 9 4.2614 3.7173 -6.2341 17 9 5.1572 2.3782 -7.8538 18 9 2.8901 2.6005 -7.6804 19 6 4.9231 1.5301 -4.7534 20 7 4.1779 0.6457 0.8811 21 6 4.0460 -0.7022 1.0380 22 6 4.7623 -1.0728 2.1188 23 6 5.3502 0.0902 2.6542 24 6 4.9755 1.1264 1.8768 25 6 5.3709 2.5672 2.0742 26 8 4.3325 3.4176 1.5837 27 14 5.6369 2.8952 3.8887 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5139 -0.8899 32 1 1.8933 -0.5138 0.8901 33 1 1.5764 1.9917 -0.8194 34 1 2.2104 1.6112 2.1409 35 1 1.9713 3.1605 1.2979 36 1 0.6067 2.0348 1.4951 37 1 3.9294 2.4699 -0.1235 38 1 3.1240 2.3675 -2.6026 39 1 2.0641 0.6349 -5.3242 40 1 2.4322 2.3573 -4.8780 41 1 3.1712 0.4524 -8.3918 42 1 3.3713 -1.2618 -7.9559 43 1 2.2393 -0.2370 -7.0410 44 1 5.0933 2.5740 -4.4897 45 1 5.8409 0.9425 -4.7729 46 1 3.4695 -1.3600 0.4045 47 1 4.8630 -2.0761 2.5056 48 1 5.9843 0.1424 3.5268 49 1 6.2932 2.7688 1.5295 50 1 4.5196 4.3616 1.6782 51 1 4.3864 2.6240 4.6425 52 1 6.7359 2.0397 4.4037 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12360566.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:11 Heat of formation + Delta-G solvation = -168.718437 kcal Electronic energy + Delta-G solvation = -40173.599884 eV Core-core repulsion = 34727.696908 eV Total energy + Delta-G solvation = -5445.902976 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.180 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -51.28162 -48.80721 -48.75454 -42.92682 -41.59465 -40.25061 -37.74632 -37.64089 -37.34067 -34.45318 -33.37468 -31.31001 -30.49367 -29.39183 -28.19527 -27.91873 -26.83142 -26.08837 -24.98509 -24.05537 -22.34682 -21.65418 -21.52992 -21.27213 -20.09180 -19.75603 -19.56620 -19.28041 -18.61415 -18.16662 -17.66366 -17.30148 -16.83478 -16.78666 -16.49027 -16.20464 -15.90488 -15.80415 -15.66522 -15.60285 -15.43736 -15.23142 -15.17970 -14.94406 -14.91847 -14.86472 -14.83307 -14.53327 -14.34312 -14.21408 -13.77303 -13.53610 -13.42742 -13.36701 -13.31154 -13.26633 -13.14147 -12.90083 -12.72495 -12.65265 -12.58540 -12.51966 -12.03438 -11.83986 -11.79803 -11.75647 -11.57479 -11.11880 -10.96996 -10.45655 -10.29366 -9.65707 -8.94303 -4.94234 0.99672 1.27307 1.31052 1.46012 1.72138 1.80665 1.92339 2.04589 2.15451 2.19470 2.51445 2.58074 2.80082 3.22576 3.23877 3.34389 3.39410 3.47809 3.57560 3.72707 3.77628 3.94102 4.00077 4.17375 4.20281 4.21755 4.24919 4.36103 4.39184 4.42107 4.46364 4.47107 4.52672 4.56023 4.58529 4.65404 4.68088 4.70584 4.77614 4.78505 4.97819 5.06530 5.08027 5.14140 5.18869 5.24257 5.25973 5.34911 5.48041 5.68450 5.89771 6.15777 6.21202 6.42106 6.92025 7.00626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.133 4.133 3 C -0.083 4.083 4 C -0.134 4.134 5 C 0.117 3.883 6 C 0.509 3.491 7 O -0.560 6.560 8 N -0.697 5.697 9 C 0.144 3.856 10 H 0.107 0.893 11 C -0.145 4.145 12 C 0.041 3.959 13 O -0.351 6.351 14 C 0.006 3.994 15 C 0.438 3.562 16 F -0.172 7.172 17 F -0.188 7.188 18 F -0.181 7.181 19 C -0.132 4.132 20 N -0.407 5.407 21 C 0.020 3.980 22 C -0.230 4.230 23 C -0.231 4.231 24 C 0.023 3.977 25 C -0.042 4.042 26 O -0.552 6.552 27 Si 0.805 3.195 28 H 0.059 0.941 29 H 0.067 0.933 30 H 0.049 0.951 31 H 0.050 0.950 32 H 0.057 0.943 33 H 0.118 0.882 34 H 0.028 0.972 35 H 0.083 0.917 36 H 0.062 0.938 37 H 0.166 0.834 38 H 0.422 0.578 39 H 0.111 0.889 40 H 0.133 0.867 41 H 0.047 0.953 42 H 0.110 0.890 43 H 0.072 0.928 44 H 0.130 0.870 45 H 0.085 0.915 46 H 0.161 0.839 47 H 0.138 0.862 48 H 0.130 0.870 49 H 0.095 0.905 50 H 0.410 0.590 51 H -0.307 1.307 52 H -0.303 1.303 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.449 8.154 -0.860 9.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.171 4.171 3 C -0.102 4.102 4 C -0.191 4.191 5 C 0.012 3.988 6 C 0.294 3.706 7 O -0.437 6.437 8 N -0.349 5.349 9 C 0.039 3.961 10 H 0.125 0.875 11 C -0.183 4.183 12 C -0.002 4.002 13 O -0.269 6.269 14 C -0.090 4.090 15 C 0.384 3.616 16 F -0.153 7.153 17 F -0.169 7.169 18 F -0.163 7.163 19 C -0.171 4.171 20 N -0.082 5.082 21 C -0.111 4.111 22 C -0.253 4.253 23 C -0.256 4.256 24 C -0.088 4.088 25 C -0.152 4.152 26 O -0.363 6.363 27 Si 0.712 3.288 28 H 0.078 0.922 29 H 0.087 0.913 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.076 0.924 33 H 0.136 0.864 34 H 0.048 0.952 35 H 0.102 0.898 36 H 0.081 0.919 37 H 0.182 0.818 38 H 0.261 0.739 39 H 0.129 0.871 40 H 0.151 0.849 41 H 0.066 0.934 42 H 0.128 0.872 43 H 0.091 0.909 44 H 0.148 0.852 45 H 0.104 0.896 46 H 0.178 0.822 47 H 0.156 0.844 48 H 0.148 0.852 49 H 0.112 0.888 50 H 0.263 0.737 51 H -0.235 1.235 52 H -0.232 1.232 Dipole moment (debyes) X Y Z Total from point charges -4.309 6.632 -0.526 7.927 hybrid contribution -0.005 -0.618 -0.744 0.968 sum -4.314 6.014 -1.270 7.510 Atomic orbital electron populations 1.21763 0.94180 1.01875 1.02609 1.21900 0.97450 0.96397 1.01327 1.21486 0.89832 0.97375 1.01514 1.21751 1.01065 1.01617 0.94709 1.21890 0.96261 0.97960 0.82690 1.20968 0.78124 0.84602 0.86869 1.90798 1.40649 1.24698 1.87574 1.45638 1.62308 1.23021 1.03976 1.22064 0.94679 0.98694 0.80699 0.87508 1.24012 0.95959 1.06291 0.92035 1.23633 1.03734 0.82891 0.89932 1.88112 1.46855 1.32744 1.59168 1.23289 0.90768 1.02637 0.92264 1.21255 0.73525 0.85624 0.81241 1.93175 1.95154 1.50096 1.76911 1.93196 1.57341 1.95648 1.70730 1.93198 1.46415 1.96720 1.79922 1.23770 0.99121 1.04754 0.89411 1.43563 1.37437 1.06225 1.21003 1.21838 1.04554 0.84483 1.00217 1.21001 1.05136 0.99026 1.00178 1.20692 1.08612 0.93224 1.03060 1.20271 1.00833 0.94873 0.92873 1.24353 0.93492 0.84856 1.12511 1.86298 1.42682 1.22530 1.84837 0.94980 0.75770 0.87135 0.70938 0.92206 0.91348 0.93158 0.93100 0.92427 0.86374 0.95241 0.89772 0.91862 0.81758 0.73926 0.87071 0.84893 0.93434 0.87161 0.90928 0.85213 0.89611 0.82155 0.84429 0.85196 0.88783 0.73709 1.23537 1.23175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.37 9.71 71.98 0.70 1.07 16 2 C -0.13 0.03 3.82 30.59 0.12 0.15 16 3 C -0.08 0.34 2.18 -10.79 -0.02 0.32 16 4 C -0.13 0.34 8.23 71.98 0.59 0.93 16 5 C 0.12 -0.14 2.20 44.25 0.10 -0.04 16 6 C 0.51 0.55 5.85 87.66 0.51 1.07 16 7 O -0.56 -6.10 14.55 -3.06 -0.04 -6.15 16 8 N -0.70 4.46 5.29 -440.05 -2.33 2.13 16 9 C 0.14 -0.60 4.14 45.52 0.19 -0.41 16 10 H 0.11 0.14 7.53 -2.39 -0.02 0.12 16 11 C -0.15 1.18 6.65 31.12 0.21 1.38 16 12 C 0.04 -0.10 0.85 -10.27 -0.01 -0.11 16 13 O -0.35 -0.43 10.33 -148.98 -1.54 -1.96 16 14 C 0.01 -0.02 10.29 113.37 1.17 1.15 16 15 C 0.44 0.07 2.52 71.98 0.18 0.25 16 16 F -0.17 0.20 15.81 44.97 0.71 0.91 16 17 F -0.19 -0.96 17.10 44.97 0.77 -0.19 16 18 F -0.18 -0.05 15.42 44.97 0.69 0.65 16 19 C -0.13 0.40 7.13 31.12 0.22 0.63 16 20 N -0.41 -2.39 1.82 -491.51 -0.90 -3.29 16 21 C 0.02 0.19 7.16 83.21 0.60 0.79 16 22 C -0.23 -2.70 10.86 22.14 0.24 -2.46 16 23 C -0.23 -2.52 9.43 22.14 0.21 -2.31 16 24 C 0.02 0.16 5.93 41.08 0.24 0.40 16 25 C -0.04 0.11 2.93 71.24 0.21 0.32 16 26 O -0.55 4.71 8.01 -148.98 -1.19 3.52 16 27 Si 0.81 -1.74 31.25 68.60 2.14 0.41 16 28 H 0.06 -0.14 6.54 -2.39 -0.02 -0.16 16 29 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 30 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.05 0.10 6.91 -2.39 -0.02 0.08 16 32 H 0.06 0.26 5.49 -2.38 -0.01 0.24 16 33 H 0.12 -1.18 8.07 -2.39 -0.02 -1.20 16 34 H 0.03 0.13 7.33 -2.39 -0.02 0.11 16 35 H 0.08 -0.47 7.04 -2.39 -0.02 -0.48 16 36 H 0.06 -0.19 6.45 -2.39 -0.02 -0.21 16 37 H 0.17 -0.86 5.45 -2.39 -0.01 -0.87 16 38 H 0.42 -5.67 8.70 -92.70 -0.81 -6.48 16 39 H 0.11 -1.06 6.66 -2.39 -0.02 -1.07 16 40 H 0.13 -1.68 8.03 -2.39 -0.02 -1.69 16 41 H 0.05 -0.10 6.73 -2.38 -0.02 -0.12 16 42 H 0.11 -0.57 8.14 -2.39 -0.02 -0.59 16 43 H 0.07 -0.51 6.54 -2.39 -0.02 -0.52 16 44 H 0.13 -0.81 7.01 -2.39 -0.02 -0.83 16 45 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 46 H 0.16 1.50 6.26 -2.91 -0.02 1.48 16 47 H 0.14 1.33 8.06 -2.91 -0.02 1.31 16 48 H 0.13 1.34 6.75 -2.91 -0.02 1.32 16 49 H 0.09 -0.54 7.96 -2.39 -0.02 -0.56 16 50 H 0.41 -7.85 8.74 -74.06 -0.65 -8.49 16 51 H -0.31 -2.11 7.11 99.48 0.71 -1.40 16 52 H -0.30 -1.66 6.89 99.48 0.69 -0.98 16 Total: 0.00 -25.56 408.31 3.31 -22.25 By element: Atomic # 1 Polarization: -20.96 SS G_CDS: -0.45 Total: -21.41 kcal Atomic # 6 Polarization: -2.32 SS G_CDS: 5.45 Total: 3.13 kcal Atomic # 7 Polarization: 2.07 SS G_CDS: -3.23 Total: -1.16 kcal Atomic # 8 Polarization: -1.82 SS G_CDS: -2.78 Total: -4.59 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 2.17 Total: 1.37 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: 2.14 Total: 0.41 kcal Total: -25.56 3.31 -22.25 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12360566.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.471 kcal (2) G-P(sol) polarization free energy of solvation -25.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.247 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds