Wall clock time and date at job start Sun Mar 7 2021 11:42:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42891 * 114.00181 * 2 1 4 4 C 1.53002 * 112.85410 * 294.58749 * 3 2 1 5 5 F 1.39903 * 109.47019 * 65.47798 * 4 3 2 6 6 F 1.39902 * 109.47525 * 185.48110 * 4 3 2 7 7 F 1.39898 * 109.46981 * 305.48324 * 4 3 2 8 8 C 1.53788 * 113.61661 * 163.39292 * 3 2 1 9 9 C 1.54054 * 86.98410 * 270.84091 * 8 3 2 10 10 H 1.08998 * 113.69074 * 89.12358 * 9 8 3 11 11 N 1.46496 * 113.61794 * 220.02209 * 9 8 3 12 12 C 1.34778 * 119.99947 * 252.48955 * 11 9 8 13 13 O 1.21694 * 119.99740 * 0.02562 * 12 11 9 14 14 C 1.46430 * 120.00377 * 179.97438 * 12 11 9 15 15 C 1.34806 * 120.00351 * 180.02562 * 14 12 11 16 16 C 1.47204 * 119.99933 * 180.02562 * 15 14 12 17 17 C 1.39827 * 120.17424 * 359.72130 * 16 15 14 18 18 C 1.37895 * 119.83002 * 179.76727 * 17 16 15 19 19 C 1.38399 * 120.16832 * 0.49534 * 18 17 16 20 20 C 1.50699 * 119.82878 * 179.76492 * 19 18 17 21 21 O 1.42899 * 109.46746 * 245.01907 * 20 19 18 22 22 Si 1.86301 * 109.47034 * 5.01534 * 20 19 18 23 23 C 1.38406 * 120.34462 * 359.78264 * 19 18 17 24 24 C 1.37891 * 120.17018 * 359.95779 * 23 19 18 25 25 C 1.53781 * 113.61740 * 65.78586 * 3 2 1 26 26 H 1.08990 * 109.47217 * 66.48469 * 1 2 3 27 27 H 1.09009 * 109.46409 * 306.48788 * 1 2 3 28 28 H 1.08998 * 109.47001 * 186.49697 * 1 2 3 29 29 H 1.08998 * 113.60973 * 25.43044 * 8 3 2 30 30 H 1.08998 * 113.61495 * 156.33987 * 8 3 2 31 31 H 0.97002 * 120.00804 * 72.49307 * 11 9 8 32 32 H 1.07998 * 119.99813 * 0.02562 * 14 12 11 33 33 H 1.07998 * 119.99836 * 0.02562 * 15 14 12 34 34 H 1.08006 * 120.08600 * 0.02562 * 17 16 15 35 35 H 1.07998 * 119.91651 * 180.25702 * 18 17 16 36 36 H 1.09001 * 109.47427 * 125.01826 * 20 19 18 37 37 H 0.96702 * 114.00140 * 179.97438 * 21 20 19 38 38 H 1.48497 * 109.99902 * 300.00607 * 22 20 19 39 39 H 1.48507 * 109.99743 * 61.32003 * 22 20 19 40 40 H 1.08004 * 119.91257 * 179.97438 * 23 19 18 41 41 H 1.08005 * 120.08400 * 180.02562 * 24 23 19 42 42 H 1.09000 * 113.61884 * 203.66505 * 25 3 2 43 43 H 1.09010 * 113.60774 * 334.48226 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7161 2.0868 -1.2821 5 9 0.3435 2.3440 -1.3668 6 9 2.4170 3.2974 -1.2616 7 9 2.1186 1.3335 -2.3901 8 6 3.4944 1.3189 0.4027 9 6 3.0141 1.4746 1.8582 10 1 2.8449 0.5259 2.3674 11 7 3.8232 2.4072 2.6467 12 6 4.6556 1.9393 3.5978 13 8 4.7354 0.7421 3.8012 14 6 5.4649 2.8713 4.3857 15 6 6.2978 2.4032 5.3366 16 6 7.1109 3.3403 6.1290 17 6 7.0264 4.7161 5.8943 18 6 7.7877 5.5879 6.6440 19 6 8.6414 5.1035 7.6196 20 6 9.4738 6.0627 8.4308 21 8 10.8581 5.8479 8.1490 22 14 9.0140 7.8127 7.9870 23 6 8.7349 3.7426 7.8540 24 6 7.9762 2.8586 7.1162 25 6 1.7329 2.1032 1.2850 26 1 -0.3633 0.4100 -0.9422 27 1 -0.3632 0.6112 0.8263 28 1 -0.3633 -1.0211 0.1163 29 1 4.0078 0.3771 0.2093 30 1 4.0405 2.1847 0.0283 31 1 3.7599 3.3614 2.4844 32 1 5.3944 3.9337 4.2048 33 1 6.3686 1.3408 5.5172 34 1 6.3634 5.0954 5.1306 35 1 7.7204 6.6511 6.4667 36 1 9.2889 5.8965 9.4921 37 1 11.4542 6.4324 8.6371 38 1 9.2613 8.0519 6.5424 39 1 7.5843 8.0583 8.3049 40 1 9.4038 3.3722 8.6168 41 1 8.0500 1.7969 7.3006 42 1 1.7984 3.1830 1.1513 43 1 0.8244 1.7951 1.8027 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:15 Heat of formation + Delta-G solvation = -177.818247 kcal Electronic energy + Delta-G solvation = -31051.827719 eV Core-core repulsion = 26036.654251 eV Total energy + Delta-G solvation = -5015.173468 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.122 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -51.31192 -48.84622 -48.77883 -41.68044 -40.75825 -40.17106 -37.75379 -37.39429 -35.22365 -34.38933 -32.35555 -31.43260 -29.18563 -28.12936 -27.21055 -26.84522 -24.82988 -24.14874 -23.25664 -22.03323 -21.48898 -20.46046 -19.75248 -19.59527 -19.31289 -18.72470 -18.37797 -17.56203 -17.30168 -17.05411 -16.64571 -16.52566 -16.25037 -15.96529 -15.89859 -15.64039 -15.57612 -15.37177 -15.21083 -15.19828 -15.01259 -14.95780 -14.89177 -14.59410 -14.35222 -14.07284 -13.86497 -13.79748 -13.61349 -13.33576 -13.16721 -13.05014 -12.69915 -12.57890 -12.37866 -12.04601 -11.96043 -11.78936 -11.41636 -11.20394 -10.97561 -10.31693 -10.25490 -10.12374 -9.34424 -4.93617 -0.65556 0.24090 0.78006 1.29718 1.40697 1.64420 1.95615 2.00220 2.09288 2.13183 2.50055 2.56738 2.67963 2.79647 3.21599 3.35309 3.37597 3.46025 3.48094 3.63844 3.74597 3.89307 3.94071 4.09797 4.12260 4.20629 4.21334 4.26653 4.31036 4.34938 4.39995 4.49048 4.55368 4.67984 4.71129 4.77355 4.79567 4.86095 4.97973 5.04696 5.25473 5.32893 5.36068 5.48623 5.67973 5.76757 6.43721 6.88776 7.11674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.002 3.998 2 O -0.350 6.350 3 C 0.043 3.957 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.173 7.173 7 F -0.187 7.187 8 C -0.131 4.131 9 C 0.140 3.860 10 H 0.110 0.890 11 N -0.701 5.701 12 C 0.547 3.453 13 O -0.585 6.585 14 C -0.209 4.209 15 C -0.018 4.018 16 C -0.081 4.081 17 C -0.097 4.097 18 C -0.145 4.145 19 C -0.081 4.081 20 C -0.084 4.084 21 O -0.564 6.564 22 Si 0.772 3.228 23 C -0.103 4.103 24 C -0.097 4.097 25 C -0.148 4.148 26 H 0.051 0.949 27 H 0.071 0.929 28 H 0.111 0.889 29 H 0.090 0.910 30 H 0.126 0.874 31 H 0.421 0.579 32 H 0.160 0.840 33 H 0.130 0.870 34 H 0.154 0.846 35 H 0.122 0.878 36 H 0.095 0.905 37 H 0.404 0.596 38 H -0.295 1.295 39 H -0.287 1.287 40 H 0.141 0.859 41 H 0.147 0.853 42 H 0.130 0.870 43 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.149 6.322 4.823 7.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.268 6.268 3 C -0.001 4.001 4 C 0.384 3.616 5 F -0.163 7.163 6 F -0.154 7.154 7 F -0.168 7.168 8 C -0.170 4.170 9 C 0.034 3.966 10 H 0.128 0.872 11 N -0.352 5.352 12 C 0.338 3.662 13 O -0.466 6.466 14 C -0.230 4.230 15 C -0.037 4.037 16 C -0.081 4.081 17 C -0.114 4.114 18 C -0.162 4.162 19 C -0.081 4.081 20 C -0.193 4.193 21 O -0.374 6.374 22 Si 0.678 3.322 23 C -0.121 4.121 24 C -0.115 4.115 25 C -0.186 4.186 26 H 0.070 0.930 27 H 0.089 0.911 28 H 0.129 0.871 29 H 0.109 0.891 30 H 0.144 0.856 31 H 0.259 0.741 32 H 0.178 0.822 33 H 0.148 0.852 34 H 0.172 0.828 35 H 0.139 0.861 36 H 0.113 0.887 37 H 0.255 0.745 38 H -0.223 1.223 39 H -0.214 1.214 40 H 0.159 0.841 41 H 0.165 0.835 42 H 0.148 0.852 43 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -0.466 5.402 4.062 6.775 hybrid contribution -0.543 -0.061 -0.724 0.907 sum -1.009 5.341 3.338 6.378 Atomic orbital electron populations 1.23372 0.78425 1.05403 1.02102 1.88106 1.22405 1.22276 1.94027 1.23608 1.00044 0.86390 0.90014 1.21309 0.74246 0.78730 0.87337 1.93176 1.31955 1.94399 1.96818 1.93181 1.78843 1.46728 1.96672 1.93197 1.90430 1.76203 1.56968 1.23790 0.91154 1.05857 0.96163 1.22140 0.90128 0.94661 0.89627 0.87191 1.45654 1.42037 1.11219 1.36253 1.18681 0.79657 0.88045 0.79802 1.90833 1.68020 1.18235 1.69542 1.22995 1.00008 1.00843 0.99123 1.22367 0.90766 0.99311 0.91302 1.19120 0.98334 0.93113 0.97557 1.21576 0.98621 0.92096 0.99117 1.21019 0.98786 0.99424 0.96998 1.19929 0.96626 0.95158 0.96435 1.24889 0.84689 1.08225 1.01521 1.86443 1.14831 1.65055 1.71095 0.94287 0.80538 0.77516 0.79827 1.21182 0.98700 0.92093 1.00141 1.21738 0.94425 1.01149 0.94220 1.24020 1.00011 1.02180 0.92407 0.93002 0.91079 0.87074 0.89142 0.85607 0.74066 0.82248 0.85243 0.82821 0.86066 0.88719 0.74491 1.22262 1.21425 0.84072 0.83495 0.85206 0.87123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 10.19 113.37 1.16 1.15 16 2 O -0.35 -0.86 10.50 -148.98 -1.56 -2.42 16 3 C 0.04 -0.02 0.79 -10.26 -0.01 -0.03 16 4 C 0.44 0.80 2.62 71.98 0.19 0.99 16 5 F -0.18 -0.40 14.85 44.97 0.67 0.27 16 6 F -0.17 -0.09 15.72 44.97 0.71 0.61 16 7 F -0.19 -1.16 17.26 44.97 0.78 -0.39 16 8 C -0.13 0.16 7.18 31.22 0.22 0.38 16 9 C 0.14 -0.24 4.18 45.61 0.19 -0.05 16 10 H 0.11 0.36 7.46 -2.39 -0.02 0.34 16 11 N -0.70 2.40 5.35 -443.82 -2.38 0.02 16 12 C 0.55 1.70 7.74 86.38 0.67 2.36 16 13 O -0.58 -7.21 15.83 -4.33 -0.07 -7.28 16 14 C -0.21 0.23 9.41 23.62 0.22 0.45 16 15 C -0.02 -0.03 9.46 23.84 0.23 0.20 16 16 C -0.08 -0.16 5.87 -20.15 -0.12 -0.27 16 17 C -0.10 -0.10 9.41 22.57 0.21 0.12 16 18 C -0.14 -0.48 8.65 22.23 0.19 -0.29 16 19 C -0.08 -0.27 5.39 -19.79 -0.11 -0.38 16 20 C -0.08 0.14 2.79 71.24 0.20 0.34 16 21 O -0.56 0.62 12.81 -148.98 -1.91 -1.28 16 22 Si 0.77 -2.55 29.83 68.60 2.05 -0.51 16 23 C -0.10 -0.26 9.66 22.23 0.21 -0.05 16 24 C -0.10 -0.18 9.80 22.58 0.22 0.04 16 25 C -0.15 0.83 6.79 31.12 0.21 1.05 16 26 H 0.05 -0.05 6.30 -2.39 -0.02 -0.07 16 27 H 0.07 -0.39 6.54 -2.38 -0.02 -0.41 16 28 H 0.11 -0.49 8.14 -2.39 -0.02 -0.51 16 29 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.13 -0.51 7.30 -2.39 -0.02 -0.53 16 31 H 0.42 -4.29 8.71 -92.71 -0.81 -5.10 16 32 H 0.16 -1.23 6.07 -2.91 -0.02 -1.25 16 33 H 0.13 0.43 7.52 -2.91 -0.02 0.41 16 34 H 0.15 -0.75 6.17 -2.91 -0.02 -0.77 16 35 H 0.12 0.28 4.84 -2.91 -0.01 0.26 16 36 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 37 H 0.40 -4.68 8.74 -74.06 -0.65 -5.32 16 38 H -0.29 -1.16 7.04 99.48 0.70 -0.46 16 39 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 40 H 0.14 -0.02 8.06 -2.91 -0.02 -0.05 16 41 H 0.15 -0.26 8.06 -2.91 -0.02 -0.29 16 42 H 0.13 -1.24 7.66 -2.39 -0.02 -1.26 16 43 H 0.11 -0.79 6.70 -2.38 -0.02 -0.81 16 Total: 0.00 -22.90 370.59 1.85 -21.05 By element: Atomic # 1 Polarization: -15.75 SS G_CDS: -0.32 Total: -16.08 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: 3.89 Total: 6.01 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -2.38 Total: 0.02 kcal Atomic # 8 Polarization: -7.45 SS G_CDS: -3.54 Total: -10.99 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 2.15 Total: 0.49 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: 2.05 Total: -0.51 kcal Total: -22.90 1.85 -21.05 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.765 kcal (2) G-P(sol) polarization free energy of solvation -22.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.053 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds