Wall clock time and date at job start Sun Mar 7 2021 11:42:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35653 * 116.99931 * 2 1 4 4 C 1.40136 * 120.15393 * 179.97438 * 3 2 1 5 5 C 1.47540 * 120.18826 * 0.04792 * 4 3 2 6 6 O 1.21585 * 119.99817 * 359.97438 * 5 4 3 7 7 N 1.34780 * 119.99543 * 179.97438 * 5 4 3 8 8 C 1.46498 * 119.99357 * 179.97438 * 7 5 4 9 9 H 1.09003 * 112.85561 * 336.19711 * 8 7 5 10 10 C 1.53787 * 113.61334 * 107.50314 * 8 7 5 11 11 C 1.53790 * 87.07993 * 139.97560 * 10 8 7 12 12 O 1.42900 * 113.68681 * 89.12749 * 11 10 8 13 13 C 1.42897 * 114.00041 * 197.34621 * 12 11 10 14 14 C 1.52998 * 113.61336 * 220.01753 * 11 10 8 15 15 F 1.39898 * 109.46543 * 152.25366 * 14 11 10 16 16 F 1.39904 * 109.47154 * 272.25070 * 14 11 10 17 17 F 1.39895 * 109.47283 * 32.25224 * 14 11 10 18 18 C 1.53780 * 87.07992 * 334.56850 * 11 10 8 19 19 C 1.39708 * 119.61864 * 179.77683 * 4 3 2 20 20 C 1.37787 * 119.90912 * 0.48069 * 19 4 3 21 21 C 1.50698 * 119.85224 * 179.79394 * 20 19 4 22 22 O 1.42906 * 109.46970 * 64.72754 * 21 20 19 23 23 Si 1.86299 * 109.47295 * 184.72247 * 21 20 19 24 24 C 1.38551 * 120.29955 * 359.51638 * 20 19 4 25 25 C 1.38056 * 120.38961 * 0.25792 * 24 20 19 26 26 H 1.08994 * 109.47361 * 299.99511 * 1 2 3 27 27 H 1.09003 * 109.47497 * 60.00085 * 1 2 3 28 28 H 1.09008 * 109.46872 * 179.97438 * 1 2 3 29 29 H 0.96991 * 120.00248 * 359.97438 * 7 5 4 30 30 H 1.08996 * 113.61538 * 254.52244 * 10 8 7 31 31 H 1.09003 * 113.61308 * 25.43634 * 10 8 7 32 32 H 1.09003 * 109.47053 * 182.46466 * 13 12 11 33 33 H 1.08998 * 109.47310 * 302.46864 * 13 12 11 34 34 H 1.09006 * 109.47052 * 62.47037 * 13 12 11 35 35 H 1.08992 * 113.61457 * 270.87464 * 18 11 10 36 36 H 1.09003 * 113.60839 * 139.97815 * 18 11 10 37 37 H 1.07999 * 120.04811 * 180.25695 * 19 4 3 38 38 H 1.09000 * 109.46932 * 304.72699 * 21 20 19 39 39 H 0.96697 * 114.00159 * 59.99846 * 22 21 20 40 40 H 1.48507 * 109.99471 * 58.68170 * 23 21 20 41 41 H 1.48497 * 110.00278 * 179.97438 * 23 21 20 42 42 H 1.08000 * 119.80659 * 180.27740 * 24 20 19 43 43 H 1.08001 * 119.95972 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2550 0.0533 0.0000 6 8 3.7095 -1.0333 -0.0004 7 7 5.6005 0.1320 0.0001 8 6 6.4057 -1.0919 0.0001 9 1 5.8706 -1.9507 0.4056 10 6 7.0983 -1.3737 -1.3437 11 6 8.3239 -1.8197 -0.5288 12 8 8.3124 -3.2073 -0.1876 13 6 9.2073 -3.5528 0.8716 14 6 9.6565 -1.3663 -1.1284 15 9 10.6044 -1.2303 -0.1084 16 9 10.0998 -2.3181 -2.0530 17 9 9.4839 -0.1362 -1.7718 18 6 7.8111 -0.9045 0.5956 19 6 4.0666 2.5365 -0.0042 20 6 3.3036 3.6838 0.0007 21 6 3.9765 5.0322 0.0002 22 8 4.6992 5.2035 -1.2207 23 14 2.6882 6.3693 0.1521 24 6 1.9204 3.6034 0.0001 25 6 1.2923 2.3740 0.0001 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0278 -0.0005 29 1 6.0356 0.9988 0.0000 30 1 6.6355 -2.1798 -1.9129 31 1 7.2733 -0.4787 -1.9408 32 1 9.1715 -4.6290 1.0409 33 1 10.2218 -3.2613 0.5998 34 1 8.9111 -3.0317 1.7820 35 1 8.1809 0.1186 0.5286 36 1 7.9237 -1.3320 1.5919 37 1 5.1445 2.6040 -0.0080 38 1 4.6659 5.0944 0.8423 39 1 4.1476 5.1596 -2.0137 40 1 1.9085 6.1836 1.4023 41 1 3.3391 7.7040 0.1535 42 1 1.3301 4.5078 -0.0006 43 1 0.2137 2.3195 0.0001 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:22 Heat of formation + Delta-G solvation = -225.549967 kcal Electronic energy + Delta-G solvation = -33699.709148 eV Core-core repulsion = 28492.009826 eV Total energy + Delta-G solvation = -5207.699322 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -51.29095 -48.81981 -48.75518 -41.94252 -41.26348 -39.78812 -39.16840 -37.35121 -37.07938 -34.52723 -32.49223 -31.79760 -29.11865 -28.45916 -28.12087 -26.82468 -26.13257 -25.58013 -23.86864 -22.49693 -21.63793 -21.25830 -19.84047 -19.57125 -19.38917 -19.26335 -18.34087 -18.12721 -17.39911 -17.01899 -16.87978 -16.70846 -16.51115 -16.12615 -15.90564 -15.80502 -15.78473 -15.73341 -15.63795 -15.55768 -15.19148 -14.94360 -14.92092 -14.77306 -14.53020 -14.50691 -14.44251 -13.80008 -13.63358 -13.44578 -13.30437 -13.15920 -13.04871 -12.67140 -12.56081 -12.40682 -12.12682 -12.00861 -11.80560 -11.75957 -11.11137 -10.94592 -10.37179 -10.32067 -10.08823 -9.28381 -4.96714 -0.26478 0.22845 1.35329 1.42354 1.66641 1.73649 2.00618 2.02542 2.09043 2.27876 2.50857 2.57602 2.68281 2.81763 3.23454 3.37939 3.49525 3.50134 3.58432 3.69370 3.77849 3.94116 4.02734 4.16477 4.23762 4.25153 4.31766 4.36713 4.37681 4.40170 4.41572 4.56739 4.57464 4.68110 4.70507 4.74952 4.78666 4.82382 4.93915 5.12189 5.29055 5.33829 5.57470 5.69328 6.29754 6.46781 6.82998 7.16461 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.172 3.828 4 C -0.197 4.197 5 C 0.561 3.439 6 O -0.559 6.559 7 N -0.706 5.706 8 C 0.142 3.858 9 H 0.110 0.890 10 C -0.131 4.131 11 C 0.044 3.956 12 O -0.349 6.349 13 C 0.004 3.996 14 C 0.439 3.561 15 F -0.181 7.181 16 F -0.186 7.186 17 F -0.173 7.173 18 C -0.148 4.148 19 C -0.016 4.016 20 C -0.168 4.168 21 C -0.063 4.063 22 O -0.554 6.554 23 Si 0.767 3.233 24 C -0.040 4.040 25 C -0.213 4.213 26 H 0.072 0.928 27 H 0.075 0.925 28 H 0.106 0.894 29 H 0.415 0.585 30 H 0.090 0.910 31 H 0.127 0.873 32 H 0.111 0.889 33 H 0.049 0.951 34 H 0.070 0.930 35 H 0.128 0.872 36 H 0.110 0.890 37 H 0.152 0.848 38 H 0.113 0.887 39 H 0.396 0.604 40 H -0.285 1.285 41 H -0.303 1.303 42 H 0.158 0.842 43 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.701 4.823 0.608 6.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.124 3.876 4 C -0.201 4.201 5 C 0.350 3.650 6 O -0.438 6.438 7 N -0.359 5.359 8 C 0.036 3.964 9 H 0.128 0.872 10 C -0.170 4.170 11 C 0.000 4.000 12 O -0.267 6.267 13 C -0.091 4.091 14 C 0.384 3.616 15 F -0.162 7.162 16 F -0.167 7.167 17 F -0.154 7.154 18 C -0.186 4.186 19 C -0.034 4.034 20 C -0.169 4.169 21 C -0.173 4.173 22 O -0.362 6.362 23 Si 0.674 3.326 24 C -0.058 4.058 25 C -0.231 4.231 26 H 0.090 0.910 27 H 0.094 0.906 28 H 0.125 0.875 29 H 0.253 0.747 30 H 0.109 0.891 31 H 0.145 0.855 32 H 0.130 0.870 33 H 0.068 0.932 34 H 0.088 0.912 35 H 0.146 0.854 36 H 0.129 0.871 37 H 0.169 0.831 38 H 0.130 0.870 39 H 0.246 0.754 40 H -0.211 1.211 41 H -0.231 1.231 42 H 0.175 0.825 43 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -3.905 4.413 1.387 6.054 hybrid contribution 1.043 -0.037 0.302 1.087 sum -2.862 4.376 1.689 5.495 Atomic orbital electron populations 1.23448 0.76513 1.05463 1.02880 1.86334 1.23212 1.26413 1.86524 1.19422 0.91353 0.85553 0.91321 1.19371 0.91103 0.93886 1.15745 1.18313 0.82526 0.88686 0.75489 1.90827 1.72404 1.30277 1.50295 1.45683 1.05148 1.09770 1.75282 1.22083 0.89857 0.88916 0.95496 0.87216 1.23770 0.91438 1.03490 0.98275 1.23596 0.89887 0.85950 1.00519 1.88107 1.63214 1.19856 1.55489 1.23310 0.92589 1.03622 0.89560 1.21248 0.88226 0.75399 0.76726 1.93186 1.68074 1.95616 1.59369 1.93198 1.91022 1.64650 1.67845 1.93177 1.95354 1.44436 1.82482 1.24013 0.94130 1.01471 0.99018 1.21119 1.00783 0.89151 0.92391 1.20246 0.93866 0.95999 1.06796 1.25023 1.03216 0.98711 0.90361 1.86480 1.38878 1.95038 1.15796 0.93895 0.79037 0.74098 0.85570 1.21278 0.93676 0.97845 0.92975 1.21484 1.01812 0.90908 1.08903 0.90977 0.90629 0.87516 0.74678 0.89094 0.85503 0.87030 0.93217 0.91161 0.85424 0.87119 0.83077 0.86953 0.75429 1.21145 1.23145 0.82454 0.81992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.30 8.57 -68.76 -0.59 -2.89 16 3 C 0.17 0.68 6.70 22.85 0.15 0.83 16 4 C -0.20 -0.69 5.89 -20.01 -0.12 -0.81 16 5 C 0.56 3.89 7.76 86.70 0.67 4.56 16 6 O -0.56 -8.82 14.76 16.94 0.25 -8.57 16 7 N -0.71 0.32 5.31 -443.18 -2.35 -2.03 16 8 C 0.14 0.01 4.18 45.52 0.19 0.20 16 9 H 0.11 0.55 7.46 -2.39 -0.02 0.53 16 10 C -0.13 0.00 7.13 31.13 0.22 0.22 16 11 C 0.04 0.02 0.85 -10.27 -0.01 0.01 16 12 O -0.35 -1.08 10.33 -148.98 -1.54 -2.62 16 13 C 0.00 -0.01 10.43 113.37 1.18 1.18 16 14 C 0.44 1.12 2.52 71.98 0.18 1.30 16 15 F -0.18 -0.45 15.24 44.97 0.69 0.23 16 16 F -0.19 -1.25 17.09 44.97 0.77 -0.49 16 17 F -0.17 -0.31 15.82 44.97 0.71 0.40 16 18 C -0.15 0.62 6.67 31.12 0.21 0.83 16 19 C -0.02 0.04 9.16 22.52 0.21 0.24 16 20 C -0.17 0.70 5.35 -19.90 -0.11 0.59 16 21 C -0.06 0.33 2.80 71.24 0.20 0.53 16 22 O -0.55 2.48 12.83 -148.98 -1.91 0.57 16 23 Si 0.77 -4.43 29.78 68.60 2.04 -2.39 16 24 C -0.04 0.22 8.65 22.30 0.19 0.41 16 25 C -0.21 0.58 9.03 22.34 0.20 0.78 16 26 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 27 H 0.08 -0.46 7.66 -2.39 -0.02 -0.47 16 28 H 0.11 -0.35 8.14 -2.38 -0.02 -0.37 16 29 H 0.41 -2.68 6.76 -92.72 -0.63 -3.31 16 30 H 0.09 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.13 -0.33 7.01 -2.39 -0.02 -0.35 16 32 H 0.11 -0.42 8.14 -2.39 -0.02 -0.44 16 33 H 0.05 -0.04 6.25 -2.39 -0.01 -0.05 16 34 H 0.07 -0.34 6.75 -2.38 -0.02 -0.36 16 35 H 0.13 -1.02 8.04 -2.39 -0.02 -1.04 16 36 H 0.11 -0.65 6.73 -2.39 -0.02 -0.66 16 37 H 0.15 -1.01 6.40 -2.91 -0.02 -1.03 16 38 H 0.11 -0.53 7.96 -2.39 -0.02 -0.55 16 39 H 0.40 -4.72 8.70 -74.06 -0.64 -5.36 16 40 H -0.28 0.29 7.11 99.48 0.71 1.00 16 41 H -0.30 -0.83 7.11 99.48 0.71 -0.13 16 42 H 0.16 -1.69 4.88 -2.91 -0.01 -1.70 16 43 H 0.16 -1.26 6.30 -2.91 -0.02 -1.27 16 Total: 0.00 -24.04 363.85 2.43 -21.60 By element: Atomic # 1 Polarization: -15.66 SS G_CDS: -0.12 Total: -15.78 kcal Atomic # 6 Polarization: 7.47 SS G_CDS: 4.49 Total: 11.96 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -2.35 Total: -2.03 kcal Atomic # 8 Polarization: -9.73 SS G_CDS: -3.79 Total: -13.52 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 2.17 Total: 0.15 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: 2.04 Total: -2.39 kcal Total: -24.04 2.43 -21.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -203.946 kcal (2) G-P(sol) polarization free energy of solvation -24.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -225.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds