Wall clock time and date at job start Sun Mar 7 2021 11:42:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42900 * 114.00270 * 2 1 4 4 C 1.53008 * 112.90508 * 294.01603 * 3 2 1 5 5 F 1.39901 * 109.46609 * 196.27234 * 4 3 2 6 6 F 1.39894 * 109.47270 * 316.27565 * 4 3 2 7 7 F 1.39903 * 109.46954 * 76.27679 * 4 3 2 8 8 C 1.53778 * 113.61716 * 162.76344 * 3 2 1 9 9 C 1.53775 * 87.08353 * 270.88480 * 8 3 2 10 10 H 1.09000 * 113.69216 * 89.12094 * 9 8 3 11 11 N 1.46496 * 113.61844 * 220.01754 * 9 8 3 12 12 C 1.34770 * 120.00230 * 252.77354 * 11 9 8 13 13 O 1.21571 * 119.99806 * 359.72160 * 12 11 9 14 14 C 1.47723 * 119.99993 * 179.71913 * 12 11 9 15 15 C 1.39638 * 120.11592 * 179.72169 * 14 12 11 16 16 C 1.37859 * 119.87344 * 179.67400 * 15 14 12 17 17 C 1.50706 * 119.93472 * 180.34268 * 16 15 14 18 18 O 1.42891 * 109.47231 * 15.28510 * 17 16 15 19 19 Si 1.86302 * 109.46876 * 135.28733 * 17 16 15 20 20 C 1.38627 * 120.12189 * 0.62993 * 16 15 14 21 21 F 1.35100 * 119.88251 * 179.69014 * 20 16 15 22 22 C 1.38671 * 120.23899 * 359.67225 * 20 16 15 23 23 C 1.37820 * 120.12037 * 359.97438 * 22 20 16 24 24 C 1.53775 * 113.61401 * 65.26389 * 3 2 1 25 25 H 1.08997 * 109.47274 * 63.55101 * 1 2 3 26 26 H 1.08999 * 109.47176 * 183.55188 * 1 2 3 27 27 H 1.09005 * 109.46770 * 303.55133 * 1 2 3 28 28 H 1.09001 * 113.61347 * 156.33281 * 8 3 2 29 29 H 1.09008 * 113.61320 * 25.43251 * 8 3 2 30 30 H 0.97008 * 119.99497 * 72.49225 * 11 9 8 31 31 H 1.07997 * 120.06093 * 359.97438 * 15 14 12 32 32 H 1.09004 * 109.47290 * 255.28043 * 17 16 15 33 33 H 0.96707 * 114.00327 * 179.97438 * 18 17 16 34 34 H 1.48499 * 110.00217 * 178.68231 * 19 17 16 35 35 H 1.48507 * 109.99751 * 299.99986 * 19 17 16 36 36 H 1.08000 * 119.94362 * 180.02562 * 22 20 16 37 37 H 1.07995 * 120.06135 * 179.97438 * 23 22 20 38 38 H 1.09003 * 113.61736 * 334.56922 * 24 3 2 39 39 H 1.09001 * 113.69538 * 203.67473 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7285 2.0828 -1.2874 5 9 2.6088 3.1662 -1.3800 6 9 1.9083 1.2403 -2.3897 7 9 0.4109 2.5527 -1.2695 8 6 3.4902 1.3208 0.4175 9 6 2.9987 1.4816 1.8657 10 1 2.8253 0.5347 2.3770 11 7 3.8013 2.4170 2.6575 12 6 4.6300 1.9523 3.6133 13 8 4.7077 0.7571 3.8219 14 6 5.4440 2.8951 4.4075 15 6 6.2991 2.4167 5.4024 16 6 7.0614 3.3005 6.1360 17 6 7.9905 2.7851 7.2048 18 8 8.1772 1.3785 7.0358 19 14 9.6346 3.6506 7.0685 20 6 6.9705 4.6629 5.8964 21 9 7.7152 5.5252 6.6224 22 6 6.1183 5.1438 4.9138 23 6 5.3570 4.2686 4.1696 24 6 1.7223 2.1080 1.2797 25 1 -0.3634 0.4577 -0.9201 26 1 -0.3633 -1.0257 0.0637 27 1 -0.3633 0.5680 0.8565 28 1 4.0402 2.1849 0.0445 29 1 4.0057 0.3781 0.2335 30 1 3.7393 3.3707 2.4910 31 1 6.3667 1.3559 5.5934 32 1 7.5582 2.9789 8.1864 33 1 8.7657 0.9783 7.6905 34 1 10.5495 3.1742 8.1368 35 1 10.2345 3.3942 5.7344 36 1 6.0515 6.2061 4.7309 37 1 4.6933 4.6442 3.4050 38 1 0.8104 1.8009 1.7918 39 1 1.7884 3.1875 1.1440 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:25 Heat of formation + Delta-G solvation = -235.329982 kcal Electronic energy + Delta-G solvation = -31270.662825 eV Core-core repulsion = 26067.305245 eV Total energy + Delta-G solvation = -5203.357580 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.097 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -51.26657 -50.26634 -48.79194 -48.73949 -41.82901 -40.83487 -39.50861 -37.81835 -37.37848 -34.65487 -32.82368 -31.89468 -29.08183 -28.12350 -27.06797 -26.80837 -25.47751 -23.57575 -23.20438 -21.61665 -21.29343 -19.81151 -19.55007 -19.27873 -19.05475 -18.80767 -18.31791 -17.54148 -17.19747 -17.04964 -16.70313 -16.55790 -16.16336 -16.03507 -15.95770 -15.81167 -15.62504 -15.56658 -15.18216 -15.10338 -15.04625 -14.91003 -14.85975 -14.62811 -14.29948 -14.16212 -14.09058 -13.76835 -13.36998 -13.19922 -13.11619 -12.91506 -12.69417 -12.55771 -12.45996 -11.91556 -11.76529 -11.26547 -11.05797 -10.97271 -10.33173 -9.99076 -9.68234 -4.84731 -0.49179 0.05859 1.16850 1.42901 1.48336 1.59602 1.86577 1.96674 2.08507 2.52378 2.56832 2.62368 2.82148 2.88253 3.08062 3.24539 3.38048 3.45741 3.50048 3.59199 3.76382 3.97854 4.04748 4.18828 4.23641 4.26965 4.33094 4.38386 4.41526 4.57238 4.61037 4.70771 4.80190 4.80737 4.84587 4.93695 5.08458 5.11277 5.28078 5.64639 5.70831 6.37699 6.49498 7.05593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.350 6.350 3 C 0.041 3.959 4 C 0.439 3.561 5 F -0.172 7.172 6 F -0.188 7.188 7 F -0.181 7.181 8 C -0.133 4.133 9 C 0.140 3.860 10 H 0.110 0.890 11 N -0.697 5.697 12 C 0.563 3.437 13 O -0.576 6.576 14 C -0.158 4.158 15 C -0.031 4.031 16 C -0.133 4.133 17 C -0.082 4.082 18 O -0.556 6.556 19 Si 0.739 3.261 20 C 0.118 3.882 21 F -0.099 7.099 22 C -0.141 4.141 23 C -0.045 4.045 24 C -0.146 4.146 25 H 0.047 0.953 26 H 0.110 0.890 27 H 0.072 0.928 28 H 0.130 0.870 29 H 0.088 0.912 30 H 0.421 0.579 31 H 0.126 0.874 32 H 0.104 0.896 33 H 0.399 0.601 34 H -0.273 1.273 35 H -0.302 1.302 36 H 0.184 0.816 37 H 0.179 0.821 38 H 0.112 0.888 39 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.995 7.581 2.051 8.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.268 6.268 3 C -0.002 4.002 4 C 0.384 3.616 5 F -0.153 7.153 6 F -0.169 7.169 7 F -0.162 7.162 8 C -0.172 4.172 9 C 0.034 3.966 10 H 0.128 0.872 11 N -0.349 5.349 12 C 0.352 3.648 13 O -0.456 6.456 14 C -0.161 4.161 15 C -0.050 4.050 16 C -0.134 4.134 17 C -0.190 4.190 18 O -0.366 6.366 19 Si 0.643 3.357 20 C 0.098 3.902 21 F -0.078 7.078 22 C -0.159 4.159 23 C -0.063 4.063 24 C -0.184 4.184 25 H 0.066 0.934 26 H 0.129 0.871 27 H 0.091 0.909 28 H 0.148 0.852 29 H 0.107 0.893 30 H 0.260 0.740 31 H 0.144 0.856 32 H 0.122 0.878 33 H 0.250 0.750 34 H -0.199 1.199 35 H -0.229 1.229 36 H 0.202 0.798 37 H 0.197 0.803 38 H 0.130 0.870 39 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.386 6.628 1.587 7.221 hybrid contribution 0.055 -0.988 -0.018 0.990 sum -2.331 5.640 1.569 6.301 Atomic orbital electron populations 1.23297 0.78453 1.05373 1.01881 1.88114 1.22344 1.22369 1.94019 1.23622 1.00086 0.86443 0.90040 1.21248 0.74323 0.78646 0.87390 1.93176 1.68886 1.56698 1.96584 1.93195 1.94983 1.71279 1.57445 1.93196 1.36824 1.89390 1.96812 1.23792 0.91379 1.06024 0.95981 1.22128 0.90333 0.94580 0.89556 0.87227 1.45616 1.42291 1.11340 1.35674 1.18417 0.79273 0.87530 0.79605 1.90815 1.67443 1.18068 1.69243 1.19964 1.01426 0.94758 0.99999 1.20825 0.91662 1.00433 0.92099 1.19442 1.00825 0.92398 1.00777 1.24714 1.08162 0.86539 0.99592 1.86473 1.71136 1.19894 1.59119 0.94250 0.73104 0.90743 0.77589 1.17750 0.93736 0.85471 0.93215 1.91197 1.72576 1.68192 1.75812 1.21457 0.96119 1.03415 0.94888 1.21557 0.96936 0.89853 0.97978 1.24019 0.99878 1.02293 0.92169 0.93403 0.87127 0.90921 0.85170 0.89342 0.73960 0.85574 0.87817 0.74958 1.19934 1.22937 0.79829 0.80345 0.86997 0.84817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 113.37 1.17 1.16 16 2 O -0.35 -0.56 10.33 -148.98 -1.54 -2.10 16 3 C 0.04 -0.08 0.85 -10.27 -0.01 -0.08 16 4 C 0.44 0.24 2.52 71.98 0.18 0.42 16 5 F -0.17 0.13 15.82 44.97 0.71 0.85 16 6 F -0.19 -1.02 17.10 44.97 0.77 -0.25 16 7 F -0.18 -0.09 15.39 44.97 0.69 0.60 16 8 C -0.13 0.32 7.13 31.12 0.22 0.54 16 9 C 0.14 -0.41 4.17 45.52 0.19 -0.22 16 10 H 0.11 0.26 7.47 -2.39 -0.02 0.24 16 11 N -0.70 3.29 5.30 -443.03 -2.35 0.94 16 12 C 0.56 2.02 7.77 86.75 0.67 2.69 16 13 O -0.58 -7.84 15.94 -3.94 -0.06 -7.90 16 14 C -0.16 -0.13 5.87 -20.09 -0.12 -0.24 16 15 C -0.03 -0.17 8.90 22.52 0.20 0.03 16 16 C -0.13 -0.31 5.15 -19.86 -0.10 -0.42 16 17 C -0.08 -0.08 2.95 71.24 0.21 0.13 16 18 O -0.56 -2.09 11.48 -148.98 -1.71 -3.80 16 19 Si 0.74 0.68 29.57 68.60 2.03 2.70 16 20 C 0.12 -0.28 6.67 22.47 0.15 -0.13 16 21 F -0.10 0.39 13.70 44.97 0.62 1.00 16 22 C -0.14 1.05 10.01 22.27 0.22 1.28 16 23 C -0.04 0.34 9.54 22.52 0.21 0.56 16 24 C -0.15 1.08 6.66 31.12 0.21 1.28 16 25 H 0.05 -0.09 6.63 -2.39 -0.02 -0.11 16 26 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 27 H 0.07 -0.48 6.58 -2.38 -0.02 -0.50 16 28 H 0.13 -0.73 7.01 -2.39 -0.02 -0.75 16 29 H 0.09 0.07 8.14 -2.38 -0.02 0.06 16 30 H 0.42 -5.30 6.76 -92.70 -0.63 -5.92 16 31 H 0.13 1.37 6.72 -2.91 -0.02 1.35 16 32 H 0.10 -0.32 7.96 -2.38 -0.02 -0.34 16 33 H 0.40 -1.76 8.74 -74.05 -0.65 -2.41 16 34 H -0.27 -1.06 7.11 99.48 0.71 -0.35 16 35 H -0.30 -2.80 7.11 99.48 0.71 -2.09 16 36 H 0.18 -2.59 8.06 -2.91 -0.02 -2.61 16 37 H 0.18 -2.93 6.40 -2.91 -0.02 -2.95 16 38 H 0.11 -0.99 6.68 -2.39 -0.02 -1.01 16 39 H 0.13 -1.63 8.04 -2.39 -0.02 -1.65 16 Total: 0.00 -23.07 340.70 2.49 -20.58 By element: Atomic # 1 Polarization: -19.52 SS G_CDS: -0.08 Total: -19.60 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 3.41 Total: 6.99 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -2.35 Total: 0.94 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: -3.31 Total: -13.80 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 2.79 Total: 2.20 kcal Atomic # 14 Polarization: 0.68 SS G_CDS: 2.03 Total: 2.70 kcal Total: -23.07 2.49 -20.58 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -214.754 kcal (2) G-P(sol) polarization free energy of solvation -23.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds