Wall clock time and date at job start Sun Mar 7 2021 11:42:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 113.99730 * 2 1 4 4 C 1.52999 * 112.85385 * 65.63984 * 3 2 1 5 5 F 1.39903 * 109.46988 * 284.19156 * 4 3 2 6 6 F 1.39898 * 109.46980 * 44.18828 * 4 3 2 7 7 F 1.39896 * 109.47422 * 164.19141 * 4 3 2 8 8 C 1.53775 * 113.61608 * 294.43732 * 3 2 1 9 9 C 1.53780 * 87.08567 * 270.88607 * 8 3 2 10 10 H 1.08999 * 113.61458 * 89.19558 * 9 8 3 11 11 N 1.46500 * 113.61645 * 220.01723 * 9 8 3 12 12 C 1.34780 * 119.99674 * 204.99728 * 11 9 8 13 13 O 1.21272 * 120.00380 * 0.02562 * 12 11 9 14 14 C 1.50702 * 119.99538 * 179.97438 * 12 11 9 15 15 N 1.46498 * 109.47060 * 180.02562 * 14 12 11 16 16 C 1.35036 * 125.93332 * 125.00037 * 15 14 12 17 17 C 1.35080 * 107.98225 * 179.72620 * 16 15 14 18 18 C 1.50698 * 126.07709 * 180.25408 * 17 16 15 19 19 O 1.42900 * 109.47031 * 104.16684 * 18 17 16 20 20 Si 1.86304 * 109.47157 * 344.16997 * 18 17 16 21 21 C 1.40847 * 107.85022 * 0.40172 * 17 16 15 22 22 C 1.48420 * 126.03989 * 179.86384 * 21 17 16 23 23 C 1.39318 * 120.11717 * 42.99259 * 22 21 17 24 24 C 1.38024 * 119.87711 * 179.97438 * 23 22 21 25 25 C 1.38324 * 120.11651 * 359.97438 * 24 23 22 26 26 C 1.38320 * 120.24399 * 0.25425 * 25 24 23 27 27 C 1.38018 * 120.11528 * 359.49172 * 26 25 24 28 28 N 1.31625 * 107.92055 * 359.59280 * 21 17 16 29 29 C 1.53783 * 87.08027 * 334.56851 * 9 8 3 30 30 H 1.08997 * 109.47339 * 295.06949 * 1 2 3 31 31 H 1.09005 * 109.47069 * 55.07082 * 1 2 3 32 32 H 1.09006 * 109.47172 * 175.06480 * 1 2 3 33 33 H 1.09001 * 113.61547 * 156.33886 * 8 3 2 34 34 H 1.09004 * 113.69481 * 25.44999 * 8 3 2 35 35 H 0.96998 * 120.00184 * 24.99951 * 11 9 8 36 36 H 1.09005 * 109.46967 * 60.00218 * 14 12 11 37 37 H 1.08999 * 109.47178 * 300.00423 * 14 12 11 38 38 H 1.08008 * 126.00626 * 0.02562 * 16 15 14 39 39 H 1.08995 * 109.47714 * 224.17044 * 18 17 16 40 40 H 0.96697 * 114.00300 * 300.00212 * 19 18 17 41 41 H 1.48501 * 110.00132 * 179.97438 * 20 18 17 42 42 H 1.48491 * 110.00100 * 301.31915 * 20 18 17 43 43 H 1.07997 * 120.06813 * 359.97438 * 23 22 21 44 44 H 1.07992 * 119.94428 * 180.02562 * 24 23 22 45 45 H 1.08003 * 119.87876 * 179.97438 * 25 24 23 46 46 H 1.07999 * 119.93762 * 179.74187 * 26 25 24 47 47 H 1.08002 * 120.06091 * 180.25018 * 27 26 25 48 48 H 1.08994 * 113.61452 * 139.98022 * 29 9 8 49 49 H 1.08999 * 113.61286 * 270.88411 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.7205 2.0848 1.2844 5 9 0.3995 2.5450 1.2628 6 9 1.9045 1.2472 2.3896 7 9 2.5926 3.1750 1.3751 8 6 1.7282 2.1053 -1.2827 9 6 3.0073 1.4778 -1.8615 10 1 2.8363 0.5298 -2.3716 11 7 3.8136 2.4116 -2.6514 12 6 4.6427 1.9452 -3.6062 13 8 4.7209 0.7526 -3.8117 14 6 5.4717 2.9058 -4.4192 15 7 6.2823 2.1570 -5.3827 16 6 6.3037 2.3494 -6.7191 17 6 7.1781 1.4691 -7.2532 18 6 7.5209 1.3345 -8.7145 19 8 8.8030 1.9166 -8.9585 20 14 6.2353 2.2128 -9.7375 21 6 7.7099 0.6971 -6.2021 22 6 8.7076 -0.3933 -6.3376 23 6 9.8053 -0.2355 -7.1810 24 6 10.7304 -1.2525 -7.3029 25 6 10.5695 -2.4264 -6.5892 26 6 9.4791 -2.5901 -5.7541 27 6 8.5508 -1.5776 -5.6207 28 7 7.1700 1.1173 -5.0776 29 6 3.4921 1.3200 -0.4106 30 1 -0.3634 0.4354 0.9308 31 1 -0.3633 0.5884 -0.8426 32 1 -0.3634 -1.0239 -0.0884 33 1 1.7941 3.1849 -1.1475 34 1 0.8188 1.7983 -1.7994 35 1 3.7508 3.3655 -2.4873 36 1 6.1257 3.4724 -3.7563 37 1 4.8138 3.5913 -4.9535 38 1 5.7271 3.0820 -7.2645 39 1 7.5432 0.2794 -8.9868 40 1 8.8565 2.8567 -8.7383 41 1 6.5623 2.0880 -11.1807 42 1 4.8928 1.6379 -9.4689 43 1 9.9321 0.6807 -7.7384 44 1 11.5819 -1.1313 -7.9561 45 1 11.2956 -3.2199 -6.6879 46 1 9.3561 -3.5104 -5.2024 47 1 7.7019 -1.7048 -4.9653 48 1 4.0066 0.3778 -0.2223 49 1 4.0402 2.1848 -0.0369 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:30 Heat of formation + Delta-G solvation = -106.774456 kcal Electronic energy + Delta-G solvation = -39586.362533 eV Core-core repulsion = 33875.890415 eV Total energy + Delta-G solvation = -5710.472119 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.144 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -51.26504 -48.81619 -48.68927 -42.46822 -41.73625 -40.27843 -39.55961 -37.74501 -37.45471 -34.85925 -34.41282 -32.22793 -31.69680 -31.32083 -29.52479 -28.50706 -28.21331 -27.00183 -25.96854 -24.57190 -23.60237 -23.26704 -22.01038 -21.57712 -21.41927 -20.82168 -19.82397 -19.55355 -19.33075 -18.70972 -18.50140 -17.62908 -17.53465 -17.23544 -16.74575 -16.65923 -16.57143 -16.18048 -15.98974 -15.93248 -15.70692 -15.61371 -15.57358 -15.47512 -15.28114 -15.17205 -14.89358 -14.86895 -14.69379 -14.66973 -14.51751 -14.17734 -14.00106 -13.97027 -13.85071 -13.66684 -13.42592 -13.34430 -13.24018 -12.86264 -12.70344 -12.39042 -12.30081 -11.93861 -11.91419 -11.83649 -11.56247 -11.24494 -11.09243 -10.55262 -10.38920 -10.26669 -9.66696 -9.62604 -9.19499 -5.08734 0.29563 0.70744 0.82186 1.16485 1.30769 1.34120 1.42305 1.63995 1.83506 1.89000 1.96190 2.01756 2.42458 2.51234 2.69405 3.07492 3.12910 3.23686 3.30196 3.38615 3.39269 3.56868 3.61749 3.71722 3.77398 3.80357 3.98789 4.09371 4.13588 4.15323 4.23175 4.25539 4.28028 4.34519 4.45465 4.49623 4.53454 4.61741 4.64852 4.66162 4.76556 4.87637 4.93515 5.10946 5.17028 5.36851 5.45253 5.54949 5.77713 5.80149 5.82694 5.85055 6.14987 6.25057 6.65692 6.70384 6.92640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.330 6.330 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.180 7.180 6 F -0.172 7.172 7 F -0.175 7.175 8 C -0.162 4.162 9 C 0.143 3.857 10 H 0.130 0.870 11 N -0.721 5.721 12 C 0.501 3.499 13 O -0.499 6.499 14 C 0.117 3.883 15 N -0.360 5.360 16 C 0.064 3.936 17 C -0.250 4.250 18 C -0.025 4.025 19 O -0.540 6.540 20 Si 0.684 3.316 21 C 0.134 3.866 22 C -0.023 4.023 23 C -0.092 4.092 24 C -0.126 4.126 25 C -0.112 4.112 26 C -0.127 4.127 27 C -0.091 4.091 28 N -0.249 5.249 29 C -0.132 4.132 30 H 0.053 0.947 31 H 0.056 0.944 32 H 0.103 0.897 33 H 0.109 0.891 34 H 0.101 0.899 35 H 0.405 0.595 36 H 0.120 0.880 37 H 0.130 0.870 38 H 0.181 0.819 39 H 0.113 0.887 40 H 0.376 0.624 41 H -0.254 1.254 42 H -0.257 1.257 43 H 0.148 0.852 44 H 0.125 0.875 45 H 0.122 0.878 46 H 0.124 0.876 47 H 0.124 0.876 48 H 0.102 0.898 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.880 7.503 -1.292 8.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.247 6.247 3 C 0.001 3.999 4 C 0.385 3.615 5 F -0.162 7.162 6 F -0.153 7.153 7 F -0.156 7.156 8 C -0.200 4.200 9 C 0.038 3.962 10 H 0.148 0.852 11 N -0.374 5.374 12 C 0.285 3.715 13 O -0.371 6.371 14 C -0.009 4.009 15 N -0.142 5.142 16 C -0.081 4.081 17 C -0.262 4.262 18 C -0.137 4.137 19 O -0.345 6.345 20 Si 0.586 3.414 21 C -0.032 4.032 22 C -0.025 4.025 23 C -0.111 4.111 24 C -0.144 4.144 25 C -0.130 4.130 26 C -0.145 4.145 27 C -0.110 4.110 28 N -0.069 5.069 29 C -0.170 4.170 30 H 0.072 0.928 31 H 0.074 0.926 32 H 0.122 0.878 33 H 0.128 0.872 34 H 0.119 0.881 35 H 0.240 0.760 36 H 0.138 0.862 37 H 0.148 0.852 38 H 0.197 0.803 39 H 0.130 0.870 40 H 0.224 0.776 41 H -0.178 1.178 42 H -0.182 1.182 43 H 0.165 0.835 44 H 0.143 0.857 45 H 0.140 0.860 46 H 0.142 0.858 47 H 0.142 0.858 48 H 0.121 0.879 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -3.388 5.745 -0.882 6.727 hybrid contribution -0.424 0.386 0.119 0.585 sum -3.812 6.130 -0.764 7.259 Atomic orbital electron populations 1.23160 0.79301 1.04540 1.01476 1.88141 1.21258 1.21394 1.93941 1.23542 0.99858 0.86533 0.89926 1.21032 0.74380 0.78661 0.87386 1.93201 1.36465 1.89698 1.96813 1.93232 1.94828 1.70996 1.56239 1.93176 1.69487 1.56370 1.96598 1.24007 1.00438 1.01330 0.94215 1.22231 0.89161 0.94857 0.89970 0.85210 1.45818 1.43706 1.10504 1.37365 1.20628 0.80291 0.90020 0.80592 1.90845 1.63880 1.15854 1.66473 1.21506 0.94207 0.92607 0.92586 1.47841 1.33351 1.28286 1.04692 1.22213 1.00567 1.00966 0.84322 1.20446 1.05863 1.02764 0.97138 1.24276 0.93048 1.02501 0.93909 1.86451 1.31359 1.28604 1.88111 0.95432 0.76982 0.89234 0.79780 1.20634 0.96334 0.95968 0.90286 1.17787 0.93847 0.91750 0.99134 1.21651 0.92445 1.00299 0.96696 1.21130 0.99507 0.93669 1.00052 1.21296 0.97636 0.97704 0.96404 1.21090 0.94817 0.99041 0.99522 1.21250 0.99193 0.92632 0.97944 1.77826 1.05743 1.01945 1.21418 1.23727 0.91303 1.06113 0.95885 0.92819 0.92578 0.87832 0.87222 0.88105 0.76015 0.86198 0.85184 0.80250 0.87018 0.77643 1.17848 1.18217 0.83460 0.85710 0.85992 0.85833 0.85837 0.87898 0.86589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.29 101.05 1.04 1.02 16 2 O -0.33 -0.14 10.34 -35.23 -0.36 -0.51 16 3 C 0.04 -0.05 0.84 -89.81 -0.08 -0.12 16 4 C 0.44 0.12 2.51 37.16 0.09 0.21 16 5 F -0.18 -0.08 15.38 2.25 0.03 -0.05 16 6 F -0.17 -0.41 17.10 2.25 0.04 -0.37 16 7 F -0.17 0.02 15.82 2.25 0.04 0.05 16 8 C -0.16 0.57 6.66 -25.92 -0.17 0.40 16 9 C 0.14 -0.31 4.17 -67.12 -0.28 -0.59 16 10 H 0.13 0.02 7.46 -51.93 -0.39 -0.37 16 11 N -0.72 2.68 5.36 -53.02 -0.28 2.39 16 12 C 0.50 -0.32 7.86 -10.98 -0.09 -0.41 16 13 O -0.50 -2.43 15.30 5.56 0.09 -2.35 16 14 C 0.12 -0.41 6.99 -5.19 -0.04 -0.45 16 15 N -0.36 -0.27 3.40 -62.58 -0.21 -0.48 16 16 C 0.06 -0.06 9.96 -17.26 -0.17 -0.23 16 17 C -0.25 -0.34 5.34 -104.76 -0.56 -0.90 16 18 C -0.03 0.00 2.17 36.00 0.08 0.07 16 19 O -0.54 0.23 10.39 -35.23 -0.37 -0.14 16 20 Si 0.68 -1.03 30.76 -169.99 -5.23 -6.26 16 21 C 0.13 0.57 6.67 -82.77 -0.55 0.02 16 22 C -0.02 -0.10 5.74 -104.90 -0.60 -0.71 16 23 C -0.09 -0.31 9.04 -39.26 -0.35 -0.66 16 24 C -0.13 -0.32 10.03 -39.63 -0.40 -0.72 16 25 C -0.11 -0.27 10.04 -39.52 -0.40 -0.66 16 26 C -0.13 -0.39 10.03 -39.63 -0.40 -0.79 16 27 C -0.09 -0.41 9.78 -39.26 -0.38 -0.79 16 28 N -0.25 -1.18 11.67 33.43 0.39 -0.79 16 29 C -0.13 0.21 7.13 -25.91 -0.18 0.03 16 30 H 0.05 -0.06 6.68 -51.93 -0.35 -0.41 16 31 H 0.06 -0.17 6.57 -51.93 -0.34 -0.51 16 32 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 33 H 0.11 -0.57 8.02 -51.93 -0.42 -0.99 16 34 H 0.10 -0.40 6.70 -51.93 -0.35 -0.75 16 35 H 0.40 -2.91 8.73 -40.82 -0.36 -3.27 16 36 H 0.12 -0.67 8.14 -51.93 -0.42 -1.10 16 37 H 0.13 -1.03 8.07 -51.93 -0.42 -1.45 16 38 H 0.18 -0.97 6.42 -52.48 -0.34 -1.30 16 39 H 0.11 0.21 7.96 -51.93 -0.41 -0.20 16 40 H 0.38 -1.66 8.70 45.56 0.40 -1.26 16 41 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 42 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 43 H 0.15 0.39 5.29 -52.49 -0.28 0.11 16 44 H 0.12 0.08 8.06 -52.49 -0.42 -0.34 16 45 H 0.12 0.04 8.06 -52.48 -0.42 -0.38 16 46 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 47 H 0.12 0.61 8.06 -52.49 -0.42 0.18 16 48 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 49 H 0.12 -0.32 7.03 -51.93 -0.36 -0.69 16 LS Contribution 419.28 15.07 6.32 6.32 Total: 0.00 -12.89 419.28 -8.76 -21.65 By element: Atomic # 1 Polarization: -8.43 SS G_CDS: -5.77 Total: -14.20 kcal Atomic # 6 Polarization: -1.84 SS G_CDS: -3.44 Total: -5.28 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.11 Total: 1.12 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.65 Total: -2.99 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.11 Total: -0.36 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.23 Total: -6.26 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -12.89 -8.76 -21.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.126 kcal (2) G-P(sol) polarization free energy of solvation -12.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.011 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.763 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.649 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds