Wall clock time and date at job start Sun Mar 7 2021 11:42:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 113.99730 * 2 1 4 4 C 1.52999 * 112.85385 * 65.63984 * 3 2 1 5 5 F 1.39903 * 109.46988 * 284.19156 * 4 3 2 6 6 F 1.39898 * 109.46980 * 44.18828 * 4 3 2 7 7 F 1.39896 * 109.47422 * 164.19141 * 4 3 2 8 8 C 1.53775 * 113.61608 * 294.43732 * 3 2 1 9 9 C 1.53780 * 87.08567 * 270.88607 * 8 3 2 10 10 H 1.08999 * 113.61458 * 89.19558 * 9 8 3 11 11 N 1.46500 * 113.61645 * 220.01723 * 9 8 3 12 12 C 1.34780 * 119.99674 * 204.99728 * 11 9 8 13 13 O 1.21272 * 120.00380 * 0.02562 * 12 11 9 14 14 C 1.50702 * 119.99538 * 179.97438 * 12 11 9 15 15 N 1.46498 * 109.47060 * 180.02562 * 14 12 11 16 16 C 1.35036 * 125.93332 * 125.00037 * 15 14 12 17 17 C 1.35080 * 107.98225 * 179.72620 * 16 15 14 18 18 C 1.50698 * 126.07709 * 180.25408 * 17 16 15 19 19 O 1.42900 * 109.47031 * 104.16684 * 18 17 16 20 20 Si 1.86304 * 109.47157 * 344.16997 * 18 17 16 21 21 C 1.40847 * 107.85022 * 0.40172 * 17 16 15 22 22 C 1.48420 * 126.03989 * 179.86384 * 21 17 16 23 23 C 1.39318 * 120.11717 * 42.99259 * 22 21 17 24 24 C 1.38024 * 119.87711 * 179.97438 * 23 22 21 25 25 C 1.38324 * 120.11651 * 359.97438 * 24 23 22 26 26 C 1.38320 * 120.24399 * 0.25425 * 25 24 23 27 27 C 1.38018 * 120.11528 * 359.49172 * 26 25 24 28 28 N 1.31625 * 107.92055 * 359.59280 * 21 17 16 29 29 C 1.53783 * 87.08027 * 334.56851 * 9 8 3 30 30 H 1.08997 * 109.47339 * 295.06949 * 1 2 3 31 31 H 1.09005 * 109.47069 * 55.07082 * 1 2 3 32 32 H 1.09006 * 109.47172 * 175.06480 * 1 2 3 33 33 H 1.09001 * 113.61547 * 156.33886 * 8 3 2 34 34 H 1.09004 * 113.69481 * 25.44999 * 8 3 2 35 35 H 0.96998 * 120.00184 * 24.99951 * 11 9 8 36 36 H 1.09005 * 109.46967 * 60.00218 * 14 12 11 37 37 H 1.08999 * 109.47178 * 300.00423 * 14 12 11 38 38 H 1.08008 * 126.00626 * 0.02562 * 16 15 14 39 39 H 1.08995 * 109.47714 * 224.17044 * 18 17 16 40 40 H 0.96697 * 114.00300 * 300.00212 * 19 18 17 41 41 H 1.48501 * 110.00132 * 179.97438 * 20 18 17 42 42 H 1.48491 * 110.00100 * 301.31915 * 20 18 17 43 43 H 1.07997 * 120.06813 * 359.97438 * 23 22 21 44 44 H 1.07992 * 119.94428 * 180.02562 * 24 23 22 45 45 H 1.08003 * 119.87876 * 179.97438 * 25 24 23 46 46 H 1.07999 * 119.93762 * 179.74187 * 26 25 24 47 47 H 1.08002 * 120.06091 * 180.25018 * 27 26 25 48 48 H 1.08994 * 113.61452 * 139.98022 * 29 9 8 49 49 H 1.08999 * 113.61286 * 270.88411 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.7205 2.0848 1.2844 5 9 0.3995 2.5450 1.2628 6 9 1.9045 1.2472 2.3896 7 9 2.5926 3.1750 1.3751 8 6 1.7282 2.1053 -1.2827 9 6 3.0073 1.4778 -1.8615 10 1 2.8363 0.5298 -2.3716 11 7 3.8136 2.4116 -2.6514 12 6 4.6427 1.9452 -3.6062 13 8 4.7209 0.7526 -3.8117 14 6 5.4717 2.9058 -4.4192 15 7 6.2823 2.1570 -5.3827 16 6 6.3037 2.3494 -6.7191 17 6 7.1781 1.4691 -7.2532 18 6 7.5209 1.3345 -8.7145 19 8 8.8030 1.9166 -8.9585 20 14 6.2353 2.2128 -9.7375 21 6 7.7099 0.6971 -6.2021 22 6 8.7076 -0.3933 -6.3376 23 6 9.8053 -0.2355 -7.1810 24 6 10.7304 -1.2525 -7.3029 25 6 10.5695 -2.4264 -6.5892 26 6 9.4791 -2.5901 -5.7541 27 6 8.5508 -1.5776 -5.6207 28 7 7.1700 1.1173 -5.0776 29 6 3.4921 1.3200 -0.4106 30 1 -0.3634 0.4354 0.9308 31 1 -0.3633 0.5884 -0.8426 32 1 -0.3634 -1.0239 -0.0884 33 1 1.7941 3.1849 -1.1475 34 1 0.8188 1.7983 -1.7994 35 1 3.7508 3.3655 -2.4873 36 1 6.1257 3.4724 -3.7563 37 1 4.8138 3.5913 -4.9535 38 1 5.7271 3.0820 -7.2645 39 1 7.5432 0.2794 -8.9868 40 1 8.8565 2.8567 -8.7383 41 1 6.5623 2.0880 -11.1807 42 1 4.8928 1.6379 -9.4689 43 1 9.9321 0.6807 -7.7384 44 1 11.5819 -1.1313 -7.9561 45 1 11.2956 -3.2199 -6.6879 46 1 9.3561 -3.5104 -5.2024 47 1 7.7019 -1.7048 -4.9653 48 1 4.0066 0.3778 -0.2223 49 1 4.0402 2.1848 -0.0369 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:28 Heat of formation + Delta-G solvation = -110.724903 kcal Electronic energy + Delta-G solvation = -39586.533837 eV Core-core repulsion = 33875.890415 eV Total energy + Delta-G solvation = -5710.643423 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.144 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -51.29814 -48.82269 -48.77214 -42.46831 -41.63068 -40.25825 -39.73246 -37.68912 -37.39345 -34.83878 -34.33786 -32.26913 -31.88141 -31.42172 -29.48675 -28.39665 -28.12637 -26.84428 -25.95810 -24.62068 -23.63459 -23.45946 -21.95469 -21.53117 -21.34585 -20.89153 -19.80771 -19.58236 -19.29745 -18.67158 -18.38345 -17.71020 -17.43188 -17.18461 -16.65714 -16.59375 -16.54486 -16.17752 -16.02879 -15.86553 -15.84231 -15.65317 -15.59132 -15.43973 -15.29832 -15.20397 -14.95483 -14.92368 -14.74867 -14.62164 -14.51325 -14.29586 -14.05031 -13.95141 -13.81366 -13.58334 -13.41780 -13.22754 -13.13962 -12.73230 -12.58458 -12.44368 -12.37165 -12.10536 -11.91791 -11.80183 -11.65792 -11.25744 -11.02916 -10.61649 -10.25783 -10.23371 -9.89284 -9.72059 -9.31476 -4.99365 0.09520 0.45741 0.85735 1.30242 1.40299 1.43866 1.47793 1.65312 1.79499 2.01471 2.07632 2.10059 2.50510 2.56855 2.79207 2.87172 3.21675 3.33637 3.39207 3.47097 3.59599 3.66901 3.76149 3.94714 3.99920 4.02500 4.11026 4.18123 4.19232 4.21203 4.23806 4.32091 4.35367 4.39212 4.46570 4.53092 4.55146 4.61541 4.66660 4.76289 4.78828 4.81139 4.85877 4.99851 5.15254 5.29535 5.31996 5.56329 5.60173 5.63186 5.67402 5.96334 6.04292 6.42792 6.63079 6.95124 7.13360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.353 6.353 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.188 7.188 7 F -0.172 7.172 8 C -0.143 4.143 9 C 0.144 3.856 10 H 0.102 0.898 11 N -0.700 5.700 12 C 0.497 3.503 13 O -0.564 6.564 14 C 0.110 3.890 15 N -0.360 5.360 16 C 0.081 3.919 17 C -0.270 4.270 18 C -0.037 4.037 19 O -0.553 6.553 20 Si 0.809 3.191 21 C 0.107 3.893 22 C -0.037 4.037 23 C -0.100 4.100 24 C -0.129 4.129 25 C -0.117 4.117 26 C -0.133 4.133 27 C -0.115 4.115 28 N -0.296 5.296 29 C -0.133 4.133 30 H 0.048 0.952 31 H 0.073 0.927 32 H 0.109 0.891 33 H 0.135 0.865 34 H 0.110 0.890 35 H 0.426 0.574 36 H 0.146 0.854 37 H 0.186 0.814 38 H 0.231 0.769 39 H 0.085 0.915 40 H 0.394 0.606 41 H -0.302 1.302 42 H -0.292 1.292 43 H 0.153 0.847 44 H 0.146 0.854 45 H 0.146 0.854 46 H 0.137 0.863 47 H 0.106 0.894 48 H 0.081 0.919 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.488 10.570 -2.207 11.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.271 6.271 3 C -0.004 4.004 4 C 0.384 3.616 5 F -0.162 7.162 6 F -0.170 7.170 7 F -0.153 7.153 8 C -0.181 4.181 9 C 0.038 3.962 10 H 0.120 0.880 11 N -0.354 5.354 12 C 0.283 3.717 13 O -0.441 6.441 14 C -0.014 4.014 15 N -0.142 5.142 16 C -0.064 4.064 17 C -0.281 4.281 18 C -0.147 4.147 19 O -0.361 6.361 20 Si 0.714 3.286 21 C -0.058 4.058 22 C -0.039 4.039 23 C -0.119 4.119 24 C -0.147 4.147 25 C -0.135 4.135 26 C -0.150 4.150 27 C -0.134 4.134 28 N -0.118 5.118 29 C -0.172 4.172 30 H 0.066 0.934 31 H 0.091 0.909 32 H 0.128 0.872 33 H 0.153 0.847 34 H 0.128 0.872 35 H 0.265 0.735 36 H 0.163 0.837 37 H 0.203 0.797 38 H 0.247 0.753 39 H 0.102 0.898 40 H 0.245 0.755 41 H -0.230 1.230 42 H -0.220 1.220 43 H 0.170 0.830 44 H 0.164 0.836 45 H 0.164 0.836 46 H 0.155 0.845 47 H 0.124 0.876 48 H 0.100 0.900 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.980 8.872 -1.733 9.877 hybrid contribution -0.252 -0.581 0.459 0.782 sum -4.232 8.291 -1.274 9.395 Atomic orbital electron populations 1.23292 0.78438 1.05346 1.01885 1.88114 1.22377 1.22562 1.94039 1.23664 1.00070 0.86383 0.90235 1.21256 0.74368 0.78674 0.87329 1.93196 1.36531 1.89689 1.96795 1.93195 1.94933 1.71594 1.57267 1.93175 1.69368 1.56178 1.96590 1.23996 0.99810 1.02303 0.91989 1.21975 0.90287 0.94517 0.89422 0.88037 1.45629 1.42343 1.11383 1.36017 1.21239 0.80140 0.89631 0.80711 1.90838 1.66039 1.18730 1.68508 1.22057 0.94608 0.91831 0.92879 1.48166 1.32621 1.27314 1.06059 1.22912 0.99238 1.00482 0.83804 1.20647 1.06964 1.03401 0.97118 1.24519 0.94302 1.01788 0.94055 1.86398 1.31297 1.30298 1.88086 0.94148 0.72679 0.86677 0.75068 1.20835 0.96915 0.96598 0.91465 1.18060 0.94572 0.92074 0.99198 1.21784 0.92429 1.00915 0.96748 1.21456 0.99796 0.93414 1.00005 1.21584 0.97708 0.98356 0.95870 1.21316 0.94774 0.99167 0.99790 1.21265 0.99538 0.93801 0.98799 1.77718 1.07536 1.04074 1.22456 1.23776 0.91246 1.05685 0.96467 0.93382 0.90878 0.87224 0.84659 0.87200 0.73487 0.83686 0.79661 0.75287 0.89782 0.75534 1.23020 1.22002 0.82956 0.83649 0.83642 0.84475 0.87610 0.90009 0.85158 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.29 113.37 1.17 1.15 16 2 O -0.35 -0.75 10.34 -148.98 -1.54 -2.29 16 3 C 0.04 -0.07 0.84 -10.27 -0.01 -0.08 16 4 C 0.44 0.27 2.51 71.98 0.18 0.45 16 5 F -0.18 -0.09 15.38 44.97 0.69 0.60 16 6 F -0.19 -1.09 17.10 44.97 0.77 -0.32 16 7 F -0.17 0.15 15.82 44.97 0.71 0.86 16 8 C -0.14 1.17 6.66 31.12 0.21 1.38 16 9 C 0.14 -0.58 4.17 45.52 0.19 -0.39 16 10 H 0.10 0.25 7.46 -2.39 -0.02 0.24 16 11 N -0.70 5.98 5.36 -440.04 -2.36 3.62 16 12 C 0.50 -0.77 7.86 87.66 0.69 -0.08 16 13 O -0.56 -6.69 15.30 -3.00 -0.05 -6.74 16 14 C 0.11 -1.03 6.99 85.63 0.60 -0.43 16 15 N -0.36 -0.29 3.40 -351.91 -1.20 -1.49 16 16 C 0.08 -0.27 9.96 83.47 0.83 0.57 16 17 C -0.27 -0.87 5.34 -19.95 -0.11 -0.97 16 18 C -0.04 -0.03 2.17 71.24 0.15 0.12 16 19 O -0.55 0.38 10.39 -148.98 -1.55 -1.17 16 20 Si 0.81 -3.23 30.76 68.60 2.11 -1.12 16 21 C 0.11 1.14 6.67 42.53 0.28 1.43 16 22 C -0.04 -0.44 5.74 -20.04 -0.12 -0.56 16 23 C -0.10 -0.86 9.04 22.48 0.20 -0.66 16 24 C -0.13 -0.77 10.03 22.24 0.22 -0.55 16 25 C -0.12 -0.66 10.04 22.31 0.22 -0.44 16 26 C -0.13 -1.10 10.03 22.24 0.22 -0.87 16 27 C -0.11 -1.44 9.78 22.48 0.22 -1.22 16 28 N -0.30 -3.37 11.67 -48.15 -0.56 -3.93 16 29 C -0.13 0.31 7.13 31.12 0.22 0.54 16 30 H 0.05 -0.08 6.68 -2.39 -0.02 -0.10 16 31 H 0.07 -0.48 6.57 -2.38 -0.02 -0.49 16 32 H 0.11 -0.49 8.14 -2.38 -0.02 -0.51 16 33 H 0.14 -1.79 8.02 -2.39 -0.02 -1.81 16 34 H 0.11 -1.03 6.70 -2.38 -0.02 -1.05 16 35 H 0.43 -7.33 8.73 -92.71 -0.81 -8.14 16 36 H 0.15 -2.05 8.14 -2.38 -0.02 -2.07 16 37 H 0.19 -3.87 8.07 -2.39 -0.02 -3.89 16 38 H 0.23 -3.43 6.42 -2.91 -0.02 -3.45 16 39 H 0.08 0.50 7.96 -2.39 -0.02 0.48 16 40 H 0.39 -3.83 8.70 -74.06 -0.64 -4.47 16 41 H -0.30 -1.20 7.11 99.48 0.71 -0.50 16 42 H -0.29 -0.56 7.11 99.48 0.71 0.15 16 43 H 0.15 1.03 5.29 -2.91 -0.02 1.01 16 44 H 0.15 0.16 8.06 -2.91 -0.02 0.14 16 45 H 0.15 0.05 8.06 -2.91 -0.02 0.02 16 46 H 0.14 0.59 8.06 -2.91 -0.02 0.57 16 47 H 0.11 1.58 8.06 -2.91 -0.02 1.55 16 48 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 49 H 0.13 -0.75 7.03 -2.39 -0.02 -0.77 16 Total: 0.00 -37.58 419.28 2.05 -35.53 By element: Atomic # 1 Polarization: -22.56 SS G_CDS: -0.37 Total: -22.92 kcal Atomic # 6 Polarization: -6.01 SS G_CDS: 5.39 Total: -0.62 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -4.12 Total: -1.80 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -3.13 Total: -10.19 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 2.17 Total: 1.13 kcal Atomic # 14 Polarization: -3.23 SS G_CDS: 2.11 Total: -1.12 kcal Total: -37.58 2.05 -35.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.200 kcal (2) G-P(sol) polarization free energy of solvation -37.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.779 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds