Wall clock time and date at job start Sun Mar 7 2021 11:42:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42899 * 113.99526 * 2 1 4 4 C 1.52992 * 112.85058 * 69.85754 * 3 2 1 5 5 F 1.39904 * 109.47004 * 286.82244 * 4 3 2 6 6 F 1.39906 * 109.47498 * 46.82157 * 4 3 2 7 7 F 1.39902 * 109.47462 * 166.82558 * 4 3 2 8 8 C 1.53785 * 113.61470 * 298.65512 * 3 2 1 9 9 C 1.53781 * 87.17142 * 270.84586 * 8 3 2 10 10 H 1.08996 * 113.61832 * 89.16141 * 9 8 3 11 11 N 1.46503 * 113.61077 * 220.06410 * 9 8 3 12 12 C 1.34778 * 119.99857 * 205.00155 * 11 9 8 13 13 O 1.21571 * 119.99852 * 0.02562 * 12 11 9 14 14 C 1.47669 * 119.99903 * 179.97438 * 12 11 9 15 15 C 1.39996 * 120.45378 * 353.85599 * 14 12 11 16 16 N 1.31313 * 121.37507 * 179.71617 * 15 14 12 17 17 C 1.32819 * 121.88716 * 0.54681 * 16 15 14 18 18 N 1.37160 * 132.95923 * 179.74406 * 17 16 15 19 19 C 1.36952 * 110.11323 * 180.02562 * 18 17 16 20 20 C 1.34186 * 109.94952 * 359.97438 * 19 18 17 21 21 C 1.50701 * 126.59758 * 179.97438 * 20 19 18 22 22 O 1.42899 * 109.47386 * 255.00108 * 21 20 19 23 23 Si 1.86302 * 109.46814 * 15.00552 * 21 20 19 24 24 C 1.41022 * 120.08933 * 359.74346 * 17 16 15 25 25 C 1.39283 * 119.61203 * 359.97438 * 24 17 16 26 26 C 1.50699 * 121.02931 * 180.02562 * 25 24 17 27 27 C 1.53788 * 113.60887 * 201.16133 * 3 2 1 28 28 H 1.09005 * 109.47018 * 181.24580 * 1 2 3 29 29 H 1.08996 * 109.47422 * 301.24203 * 1 2 3 30 30 H 1.08995 * 109.47367 * 61.24800 * 1 2 3 31 31 H 1.08995 * 113.61095 * 25.43559 * 8 3 2 32 32 H 1.09006 * 113.60917 * 156.25659 * 8 3 2 33 33 H 0.97003 * 120.00184 * 24.99592 * 11 9 8 34 34 H 1.08004 * 119.31548 * 359.97438 * 15 14 12 35 35 H 0.96996 * 124.94218 * 359.97438 * 18 17 16 36 36 H 1.07991 * 125.02741 * 179.97438 * 19 18 17 37 37 H 1.08998 * 109.47046 * 135.00076 * 21 20 19 38 38 H 0.96702 * 114.00153 * 179.97438 * 22 21 20 39 39 H 1.48502 * 109.99695 * 178.68184 * 23 21 20 40 40 H 1.48501 * 109.99914 * 299.99226 * 23 21 20 41 41 H 1.08998 * 109.47149 * 264.27345 * 26 25 24 42 42 H 1.09001 * 109.47382 * 24.27579 * 26 25 24 43 43 H 1.08999 * 109.47292 * 144.27566 * 26 25 24 44 44 H 1.09003 * 113.61032 * 203.66885 * 27 3 2 45 45 H 1.08994 * 113.61381 * 334.48105 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.8082 2.0457 1.3236 5 9 0.4740 2.4527 1.4315 6 9 2.1231 1.1934 2.3874 7 9 2.6426 3.1679 1.3625 8 6 1.6433 2.1431 -1.2365 9 6 2.8802 1.5365 -1.9199 10 1 2.6753 0.6040 -2.4458 11 7 3.6314 2.4964 -2.7327 12 6 4.3938 2.0620 -3.7557 13 8 4.4578 0.8737 -4.0042 14 6 5.1505 3.0295 -4.5753 15 6 4.9845 4.4061 -4.3819 16 7 5.6522 5.2823 -5.0967 17 6 6.5073 4.9106 -6.0426 18 7 7.3047 5.6127 -6.9100 19 6 8.0132 4.7491 -7.7024 20 6 7.7083 3.4815 -7.3847 21 6 8.2694 2.2360 -8.0210 22 8 7.2880 1.6586 -8.8844 23 14 9.7865 2.6734 -9.0099 24 6 6.7245 3.5414 -6.3009 25 6 6.0381 2.5836 -5.5584 26 6 6.2462 1.1119 -5.8073 27 6 3.4611 1.3338 -0.5087 28 1 -0.3633 -1.0275 0.0223 29 1 -0.3634 0.5330 0.8786 30 1 -0.3634 0.4943 -0.9009 31 1 0.7010 1.8494 -1.6988 32 1 1.7179 3.2183 -1.0733 33 1 3.5800 3.4446 -2.5347 34 1 4.2960 4.7547 -3.6263 35 1 7.3585 6.5801 -6.9560 36 1 8.7135 5.0445 -8.4695 37 1 8.5363 1.5197 -7.2440 38 1 7.5814 0.8516 -9.3292 39 1 10.3677 1.4488 -9.6166 40 1 9.4359 3.6494 -10.0728 41 1 5.4722 0.7443 -6.4809 42 1 7.2257 0.9547 -6.2589 43 1 6.1913 0.5722 -4.8619 44 1 4.0340 2.1876 -0.1469 45 1 3.9867 0.3873 -0.3822 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:42:41 Heat of formation + Delta-G solvation = -143.141165 kcal Electronic energy + Delta-G solvation = -36495.200106 eV Core-core repulsion = 31066.914768 eV Total energy + Delta-G solvation = -5428.285338 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.129 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.24813 -48.78076 -48.71950 -42.84819 -41.64816 -40.44793 -38.71663 -37.83571 -37.34342 -35.16550 -34.45476 -32.04186 -31.11191 -29.17980 -28.73134 -28.08434 -26.73864 -26.47323 -25.04040 -24.21632 -23.43157 -21.92367 -21.31685 -20.38976 -19.76867 -19.53590 -19.36574 -19.10466 -18.66459 -18.48188 -17.61385 -17.28150 -17.07049 -16.58116 -16.55168 -16.39725 -15.91323 -15.76071 -15.63141 -15.57168 -15.49431 -15.23943 -15.14157 -15.03512 -14.89566 -14.85045 -14.80170 -14.51483 -14.14138 -14.06763 -13.72587 -13.68881 -13.57356 -13.33205 -13.23600 -13.17824 -12.92177 -12.65156 -12.62637 -12.50342 -11.97623 -11.73077 -11.23868 -11.13820 -10.95920 -10.46357 -10.22945 -10.21358 -9.62503 -9.12271 -4.85118 -0.34475 -0.06856 1.33488 1.39722 1.45945 1.62565 1.71181 1.75958 2.00623 2.01997 2.11759 2.55185 2.62443 2.75342 2.85829 3.26521 3.32073 3.38860 3.41856 3.53341 3.60564 3.67815 3.72591 3.79017 4.02176 4.13205 4.18720 4.25694 4.29639 4.32660 4.33204 4.41834 4.45354 4.60973 4.62072 4.72056 4.73748 4.80065 4.83853 4.85850 5.00617 5.18518 5.25226 5.34174 5.44193 5.73090 5.73490 6.21931 6.43128 6.67019 6.83400 7.13198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.349 6.349 3 C 0.042 3.958 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.187 7.187 7 F -0.173 7.173 8 C -0.151 4.151 9 C 0.144 3.856 10 H 0.114 0.886 11 N -0.702 5.702 12 C 0.576 3.424 13 O -0.560 6.560 14 C -0.242 4.242 15 C 0.182 3.818 16 N -0.516 5.516 17 C 0.290 3.710 18 N -0.560 5.560 19 C 0.086 3.914 20 C -0.159 4.159 21 C -0.060 4.060 22 O -0.558 6.558 23 Si 0.775 3.225 24 C -0.168 4.168 25 C 0.065 3.935 26 C -0.114 4.114 27 C -0.131 4.131 28 H 0.110 0.890 29 H 0.050 0.950 30 H 0.071 0.929 31 H 0.111 0.889 32 H 0.130 0.870 33 H 0.416 0.584 34 H 0.197 0.803 35 H 0.439 0.561 36 H 0.216 0.784 37 H 0.082 0.918 38 H 0.391 0.609 39 H -0.291 1.291 40 H -0.278 1.278 41 H 0.071 0.929 42 H 0.076 0.924 43 H 0.087 0.913 44 H 0.127 0.873 45 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.665 3.990 -1.607 5.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 O -0.267 6.267 3 C -0.001 4.001 4 C 0.384 3.616 5 F -0.164 7.164 6 F -0.169 7.169 7 F -0.154 7.154 8 C -0.188 4.188 9 C 0.038 3.962 10 H 0.132 0.868 11 N -0.354 5.354 12 C 0.365 3.635 13 O -0.440 6.440 14 C -0.249 4.249 15 C 0.013 3.987 16 N -0.229 5.229 17 C 0.056 3.944 18 N -0.167 5.167 19 C -0.041 4.041 20 C -0.166 4.166 21 C -0.168 4.168 22 O -0.367 6.367 23 Si 0.678 3.322 24 C -0.175 4.175 25 C 0.056 3.944 26 C -0.169 4.169 27 C -0.170 4.170 28 H 0.128 0.872 29 H 0.069 0.931 30 H 0.090 0.910 31 H 0.129 0.871 32 H 0.148 0.852 33 H 0.255 0.745 34 H 0.214 0.786 35 H 0.280 0.720 36 H 0.232 0.768 37 H 0.100 0.900 38 H 0.241 0.759 39 H -0.218 1.218 40 H -0.205 1.205 41 H 0.090 0.910 42 H 0.095 0.905 43 H 0.105 0.895 44 H 0.145 0.855 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.801 4.558 -2.271 5.812 hybrid contribution -1.082 -0.830 0.005 1.364 sum 1.719 3.728 -2.266 4.688 Atomic orbital electron populations 1.23323 0.78529 1.05261 1.02074 1.88107 1.22305 1.22311 1.93990 1.23599 1.00728 0.86683 0.89130 1.21304 0.73899 0.78164 0.88271 1.93180 1.35285 1.91152 1.96771 1.93196 1.92647 1.70697 1.60312 1.93179 1.71744 1.53738 1.96774 1.24044 1.00545 1.01963 0.92285 1.22129 0.90717 0.94037 0.89270 0.86762 1.45633 1.47200 1.11285 1.31278 1.17958 0.78524 0.87325 0.79710 1.90752 1.64283 1.18120 1.70797 1.20469 1.05657 0.95331 1.03453 1.23020 0.94010 0.86731 0.94941 1.66523 1.09246 1.39643 1.07531 1.18759 0.93962 0.88773 0.92899 1.41572 1.35171 1.10300 1.29632 1.22222 0.97817 0.87861 0.96150 1.19719 1.02893 0.94246 0.99790 1.24520 1.00240 0.94299 0.97731 1.86598 1.41463 1.45988 1.62671 0.94179 0.77335 0.80248 0.80482 1.19754 1.03197 0.92991 1.01606 1.20075 0.88797 0.96696 0.88824 1.21033 1.02411 0.89958 1.03537 1.23798 0.91807 1.05938 0.95440 0.87176 0.93131 0.91041 0.87051 0.85189 0.74467 0.78605 0.72013 0.76812 0.89995 0.75858 1.21762 1.20498 0.91002 0.90514 0.89489 0.85535 0.88952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.45 113.37 1.19 1.18 16 2 O -0.35 -0.60 10.38 -148.98 -1.55 -2.14 16 3 C 0.04 -0.05 0.82 -10.27 -0.01 -0.06 16 4 C 0.44 0.63 2.63 71.98 0.19 0.82 16 5 F -0.18 -0.32 15.19 44.97 0.68 0.36 16 6 F -0.19 -1.12 17.15 44.97 0.77 -0.35 16 7 F -0.17 -0.06 15.78 44.97 0.71 0.65 16 8 C -0.15 0.95 6.68 31.12 0.21 1.16 16 9 C 0.14 -0.39 4.19 45.57 0.19 -0.20 16 10 H 0.11 0.18 7.46 -2.39 -0.02 0.16 16 11 N -0.70 2.46 5.31 -442.80 -2.35 0.11 16 12 C 0.58 2.25 7.72 86.73 0.67 2.92 16 13 O -0.56 -5.99 13.08 -3.94 -0.05 -6.04 16 14 C -0.24 -1.00 5.89 -19.99 -0.12 -1.12 16 15 C 0.18 0.13 10.67 85.20 0.91 1.04 16 16 N -0.52 -2.35 10.37 -191.74 -1.99 -4.34 16 17 C 0.29 1.40 8.42 134.02 1.13 2.53 16 18 N -0.56 0.90 6.04 -192.24 -1.16 -0.26 16 19 C 0.09 -0.25 10.44 82.97 0.87 0.62 16 20 C -0.16 -0.32 5.61 -18.64 -0.10 -0.43 16 21 C -0.06 0.05 2.06 71.24 0.15 0.20 16 22 O -0.56 -1.29 12.86 -148.98 -1.92 -3.21 16 23 Si 0.77 -3.92 30.80 68.60 2.11 -1.81 16 24 C -0.17 -1.06 6.16 -20.19 -0.12 -1.18 16 25 C 0.06 0.46 5.98 -19.25 -0.12 0.34 16 26 C -0.11 -0.75 8.70 71.24 0.62 -0.13 16 27 C -0.13 0.30 7.15 31.18 0.22 0.52 16 28 H 0.11 -0.52 8.14 -2.38 -0.02 -0.54 16 29 H 0.05 -0.09 6.25 -2.39 -0.01 -0.10 16 30 H 0.07 -0.44 6.53 -2.39 -0.02 -0.45 16 31 H 0.11 -0.87 6.50 -2.39 -0.02 -0.89 16 32 H 0.13 -1.33 7.93 -2.38 -0.02 -1.35 16 33 H 0.42 -4.08 6.81 -92.71 -0.63 -4.71 16 34 H 0.20 -1.61 6.43 -2.91 -0.02 -1.62 16 35 H 0.44 -3.22 8.96 -92.71 -0.83 -4.05 16 36 H 0.22 -2.17 6.31 -2.92 -0.02 -2.19 16 37 H 0.08 -0.21 6.05 -2.39 -0.01 -0.22 16 38 H 0.39 -2.10 8.74 -74.06 -0.65 -2.75 16 39 H -0.29 -0.10 7.11 99.48 0.71 0.61 16 40 H -0.28 0.21 7.04 99.48 0.70 0.91 16 41 H 0.07 0.63 8.14 -2.39 -0.02 0.61 16 42 H 0.08 0.28 5.08 -2.39 -0.01 0.27 16 43 H 0.09 0.76 5.91 -2.39 -0.01 0.75 16 44 H 0.13 -0.61 7.09 -2.39 -0.02 -0.63 16 45 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 Total: 0.00 -25.25 375.15 0.19 -25.05 By element: Atomic # 1 Polarization: -15.26 SS G_CDS: -0.94 Total: -16.20 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: 5.87 Total: 8.19 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -5.50 Total: -4.49 kcal Atomic # 8 Polarization: -7.88 SS G_CDS: -3.51 Total: -11.40 kcal Atomic # 9 Polarization: -1.51 SS G_CDS: 2.16 Total: 0.65 kcal Atomic # 14 Polarization: -3.92 SS G_CDS: 2.11 Total: -1.81 kcal Total: -25.25 0.19 -25.05 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.087 kcal (2) G-P(sol) polarization free energy of solvation -25.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.055 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.141 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds