Wall clock time and date at job start Sun Mar 7 2021 11:43:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42899 * 114.00104 * 2 1 4 4 C 1.53001 * 112.85283 * 68.03008 * 3 2 1 5 5 F 1.39894 * 109.47084 * 283.45268 * 4 3 2 6 6 F 1.39905 * 109.46799 * 43.44755 * 4 3 2 7 7 F 1.39895 * 109.47304 * 163.44778 * 4 3 2 8 8 C 1.53778 * 113.61303 * 296.83411 * 3 2 1 9 9 C 1.53773 * 87.08461 * 270.88477 * 8 3 2 10 10 H 1.08999 * 113.61600 * 89.11359 * 9 8 3 11 11 N 1.46502 * 113.61809 * 219.93380 * 9 8 3 12 12 C 1.34772 * 120.00063 * 203.46780 * 11 9 8 13 13 O 1.21513 * 120.00092 * 0.02562 * 12 11 9 14 14 C 1.48171 * 119.99686 * 179.97438 * 12 11 9 15 15 N 1.32715 * 119.72595 * 0.02562 * 14 12 11 16 16 C 1.31518 * 121.64765 * 179.97438 * 15 14 12 17 17 C 1.38565 * 120.89946 * 0.02562 * 16 15 14 18 18 C 1.50700 * 120.32165 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.47229 * 244.99933 * 18 17 16 20 20 Si 1.86295 * 109.47271 * 4.99808 * 18 17 16 21 21 C 1.38625 * 119.35232 * 359.97438 * 17 16 15 22 22 C 1.38584 * 118.48892 * 359.74502 * 21 17 16 23 23 C 1.53784 * 113.61476 * 199.33727 * 3 2 1 24 24 H 1.09003 * 109.47537 * 179.77905 * 1 2 3 25 25 H 1.08998 * 109.47625 * 299.78189 * 1 2 3 26 26 H 1.08999 * 109.47169 * 59.78163 * 1 2 3 27 27 H 1.08998 * 113.61577 * 156.33412 * 8 3 2 28 28 H 1.09007 * 113.69010 * 25.44452 * 8 3 2 29 29 H 0.97002 * 119.99252 * 23.47073 * 11 9 8 30 30 H 1.08000 * 119.55499 * 179.97438 * 16 15 14 31 31 H 1.09003 * 109.47301 * 124.99966 * 18 17 16 32 32 H 0.96698 * 113.99844 * 59.99408 * 19 18 17 33 33 H 1.48496 * 110.00109 * 58.68084 * 20 18 17 34 34 H 1.48498 * 110.00031 * 180.02562 * 20 18 17 35 35 H 1.08003 * 120.75305 * 179.97438 * 21 17 16 36 36 H 1.07996 * 120.47246 * 180.26126 * 22 21 17 37 37 H 1.08997 * 113.61536 * 334.56853 * 23 3 2 38 38 H 1.08996 * 113.61471 * 203.66327 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7700 2.0628 1.3075 5 9 0.4543 2.5373 1.3366 6 9 1.9793 1.2019 2.3903 7 9 2.6568 3.1415 1.3913 8 6 1.6797 2.1269 -1.2573 9 6 2.9355 1.5096 -1.8950 10 1 2.7451 0.5697 -2.4130 11 7 3.7103 2.4565 -2.7008 12 6 4.5254 2.0038 -3.6740 13 8 4.6173 0.8104 -3.8834 14 6 5.3087 2.9615 -4.4893 15 7 5.2038 4.2639 -4.2563 16 6 5.8816 5.1470 -4.9565 17 6 6.7361 4.7464 -5.9711 18 6 7.5061 5.7695 -6.7656 19 8 7.0673 5.7455 -8.1254 20 14 7.2115 7.4633 -6.0480 21 6 6.8757 3.3953 -6.2481 22 6 6.1536 2.4871 -5.4903 23 6 3.4754 1.3274 -0.4666 24 1 -0.3634 -1.0277 -0.0040 25 1 -0.3634 0.5104 0.8919 26 1 -0.3633 0.5172 -0.8880 27 1 1.7511 3.2040 -1.1064 28 1 0.7511 1.8283 -1.7440 29 1 3.6367 3.4092 -2.5338 30 1 5.7702 6.1988 -4.7383 31 1 8.5702 5.5370 -6.7231 32 1 6.1278 5.9440 -8.2390 33 1 7.6343 7.4924 -4.6248 34 1 7.9650 8.4814 -6.8231 35 1 7.5351 3.0579 -7.0341 36 1 6.2412 1.4268 -5.6759 37 1 3.9964 0.3823 -0.3140 38 1 4.0377 2.1859 -0.0995 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:43:05 Heat of formation + Delta-G solvation = -182.615571 kcal Electronic energy + Delta-G solvation = -28846.707610 eV Core-core repulsion = 24049.663963 eV Total energy + Delta-G solvation = -4797.043647 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.102 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.27179 -48.80225 -48.74023 -42.02858 -41.33318 -39.97275 -37.86902 -37.37974 -34.66822 -33.54618 -32.93624 -29.27521 -28.14482 -27.70697 -26.79408 -25.06855 -24.60316 -23.31150 -21.92745 -21.38713 -19.80371 -19.55856 -19.38687 -19.11167 -18.57270 -17.73879 -17.26454 -16.89086 -16.63166 -16.55895 -16.31249 -16.07155 -15.89556 -15.82456 -15.63201 -15.57168 -15.19880 -15.13788 -14.92353 -14.88132 -14.72657 -14.45438 -14.32892 -14.23402 -13.72953 -13.55676 -13.31635 -13.14605 -12.68339 -12.57209 -12.53586 -12.18070 -11.77124 -11.53042 -11.05347 -11.00346 -10.68939 -10.56315 -10.38821 -10.15183 -4.99880 -0.60881 0.08103 1.25818 1.42367 1.48935 1.65321 1.91464 1.99442 2.07400 2.51806 2.58098 2.66073 2.79848 2.95629 3.24317 3.37177 3.44209 3.49247 3.52931 3.66901 3.79548 3.94411 3.97747 4.13210 4.23915 4.28087 4.38205 4.41399 4.42115 4.57974 4.58948 4.68403 4.77232 4.81256 4.90416 4.99924 5.26712 5.38556 5.70553 6.22605 6.58996 6.72915 6.98840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.348 6.348 3 C 0.044 3.956 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.186 7.186 7 F -0.174 7.174 8 C -0.147 4.147 9 C 0.138 3.862 10 H 0.117 0.883 11 N -0.688 5.688 12 C 0.574 3.426 13 O -0.561 6.561 14 C 0.064 3.936 15 N -0.457 5.457 16 C 0.103 3.897 17 C -0.142 4.142 18 C -0.069 4.069 19 O -0.551 6.551 20 Si 0.774 3.226 21 C -0.054 4.054 22 C -0.115 4.115 23 C -0.132 4.132 24 H 0.112 0.888 25 H 0.048 0.952 26 H 0.072 0.928 27 H 0.127 0.873 28 H 0.115 0.885 29 H 0.423 0.577 30 H 0.189 0.811 31 H 0.118 0.882 32 H 0.398 0.602 33 H -0.279 1.279 34 H -0.298 1.298 35 H 0.159 0.841 36 H 0.149 0.851 37 H 0.093 0.907 38 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.757 4.560 -2.781 6.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.266 6.266 3 C 0.001 3.999 4 C 0.384 3.616 5 F -0.162 7.162 6 F -0.168 7.168 7 F -0.156 7.156 8 C -0.185 4.185 9 C 0.033 3.967 10 H 0.135 0.865 11 N -0.339 5.339 12 C 0.360 3.640 13 O -0.439 6.439 14 C -0.074 4.074 15 N -0.168 5.168 16 C -0.056 4.056 17 C -0.145 4.145 18 C -0.180 4.180 19 O -0.359 6.359 20 Si 0.679 3.321 21 C -0.080 4.080 22 C -0.136 4.136 23 C -0.171 4.171 24 H 0.130 0.870 25 H 0.067 0.933 26 H 0.091 0.909 27 H 0.145 0.855 28 H 0.133 0.867 29 H 0.262 0.738 30 H 0.205 0.795 31 H 0.135 0.865 32 H 0.248 0.752 33 H -0.206 1.206 34 H -0.225 1.225 35 H 0.177 0.823 36 H 0.167 0.833 37 H 0.112 0.888 38 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -2.230 4.342 -1.937 5.251 hybrid contribution 0.748 -0.313 -0.056 0.813 sum -1.482 4.028 -1.993 4.732 Atomic orbital electron populations 1.23314 0.78417 1.05383 1.01984 1.88108 1.22382 1.22124 1.93994 1.23576 1.00262 0.86616 0.89492 1.21264 0.74116 0.78364 0.87898 1.93189 1.36876 1.89218 1.96926 1.93197 1.94578 1.70134 1.58870 1.93178 1.68601 1.57129 1.96644 1.24004 1.00232 1.01944 0.92324 1.22226 0.90696 0.94326 0.89489 0.86512 1.45659 1.42913 1.11644 1.33682 1.18092 0.79202 0.86902 0.79844 1.90810 1.66330 1.16882 1.69892 1.21039 0.98351 0.90951 0.97020 1.67492 1.21725 1.01234 1.26341 1.23009 0.91628 0.99848 0.91149 1.21769 0.98527 0.96323 0.97852 1.25161 1.00189 1.06717 0.85911 1.86517 1.32694 1.93979 1.22699 0.93822 0.89612 0.72644 0.75973 1.21733 0.96710 0.91936 0.97624 1.22280 0.94598 1.02583 0.94114 1.23762 0.91764 1.05935 0.95617 0.86988 0.93349 0.90932 0.85454 0.86703 0.73778 0.79454 0.86462 0.75203 1.20590 1.22548 0.82339 0.83337 0.88823 0.85769 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.42 113.37 1.18 1.17 16 2 O -0.35 -0.59 10.32 -148.98 -1.54 -2.13 16 3 C 0.04 -0.03 0.85 -10.27 -0.01 -0.04 16 4 C 0.44 0.83 2.57 71.98 0.18 1.01 16 5 F -0.18 -0.32 15.35 44.97 0.69 0.37 16 6 F -0.19 -1.16 17.09 44.97 0.77 -0.39 16 7 F -0.17 -0.25 15.83 44.97 0.71 0.46 16 8 C -0.15 0.81 6.65 31.12 0.21 1.02 16 9 C 0.14 -0.23 4.15 45.52 0.19 -0.04 16 10 H 0.12 0.22 7.50 -2.39 -0.02 0.20 16 11 N -0.69 0.85 5.35 -442.60 -2.37 -1.52 16 12 C 0.57 2.54 7.81 86.88 0.68 3.22 16 13 O -0.56 -6.25 15.94 -3.76 -0.06 -6.31 16 14 C 0.06 0.13 6.75 41.91 0.28 0.42 16 15 N -0.46 0.36 9.54 -184.91 -1.76 -1.40 16 16 C 0.10 -0.46 9.84 84.82 0.83 0.37 16 17 C -0.14 0.63 5.37 -19.69 -0.11 0.52 16 18 C -0.07 0.40 2.82 71.24 0.20 0.60 16 19 O -0.55 2.59 12.84 -148.98 -1.91 0.67 16 20 Si 0.77 -5.39 29.83 68.60 2.05 -3.35 16 21 C -0.05 0.14 9.83 22.44 0.22 0.36 16 22 C -0.11 -0.09 9.63 22.61 0.22 0.12 16 23 C -0.13 0.15 7.14 31.12 0.22 0.37 16 24 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 25 H 0.05 -0.09 6.46 -2.39 -0.02 -0.11 16 26 H 0.07 -0.47 6.57 -2.39 -0.02 -0.49 16 27 H 0.13 -1.11 8.04 -2.39 -0.02 -1.13 16 28 H 0.11 -0.89 6.59 -2.38 -0.02 -0.90 16 29 H 0.42 -2.09 8.04 -92.71 -0.75 -2.84 16 30 H 0.19 -1.92 4.92 -2.91 -0.01 -1.93 16 31 H 0.12 -0.60 7.96 -2.39 -0.02 -0.62 16 32 H 0.40 -5.03 8.70 -74.06 -0.64 -5.68 16 33 H -0.28 0.64 7.11 99.48 0.71 1.35 16 34 H -0.30 -0.41 7.11 99.48 0.71 0.30 16 35 H 0.16 -0.83 8.06 -2.91 -0.02 -0.85 16 36 H 0.15 0.17 7.64 -2.91 -0.02 0.14 16 37 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 38 H 0.12 -0.37 7.01 -2.39 -0.02 -0.39 16 Total: 0.00 -18.64 333.90 0.68 -17.96 By element: Atomic # 1 Polarization: -13.27 SS G_CDS: -0.19 Total: -13.47 kcal Atomic # 6 Polarization: 4.80 SS G_CDS: 4.31 Total: 9.11 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -4.13 Total: -2.93 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -3.51 Total: -7.77 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 2.17 Total: 0.44 kcal Atomic # 14 Polarization: -5.39 SS G_CDS: 2.05 Total: -3.35 kcal Total: -18.64 0.68 -17.96 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.654 kcal (2) G-P(sol) polarization free energy of solvation -18.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.961 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds