Wall clock time and date at job start Sun Mar 7 2021 11:43:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42897 * 114.00045 * 2 1 4 4 C 1.53000 * 112.85322 * 66.08182 * 3 2 1 5 5 F 1.39905 * 109.47261 * 283.55877 * 4 3 2 6 6 F 1.39904 * 109.46941 * 43.55423 * 4 3 2 7 7 F 1.39899 * 109.47790 * 163.55771 * 4 3 2 8 8 C 1.53782 * 113.61313 * 294.88588 * 3 2 1 9 9 C 1.53774 * 87.08472 * 270.79769 * 8 3 2 10 10 H 1.08999 * 113.61272 * 89.19326 * 9 8 3 11 11 N 1.46497 * 113.61997 * 220.01918 * 9 8 3 12 12 C 1.34778 * 120.00360 * 204.99963 * 11 9 8 13 13 O 1.21628 * 119.99303 * 359.97438 * 12 11 9 14 14 C 1.47254 * 120.00159 * 180.02562 * 12 11 9 15 15 C 1.36774 * 126.94130 * 359.96935 * 14 12 11 16 16 N 1.34664 * 108.39559 * 180.02562 * 15 14 12 17 17 C 1.46496 * 124.85024 * 180.26554 * 16 15 14 18 18 C 1.36451 * 110.29787 * 359.97438 * 16 15 14 19 19 C 1.50700 * 125.56825 * 179.97438 * 18 16 15 20 20 O 1.42895 * 109.47446 * 330.00510 * 19 18 16 21 21 Si 1.86294 * 109.47066 * 210.00110 * 19 18 16 22 22 C 1.34486 * 108.85420 * 0.02562 * 18 16 15 23 23 C 1.53780 * 113.69590 * 197.35237 * 3 2 1 24 24 H 1.08999 * 109.46867 * 182.46862 * 1 2 3 25 25 H 1.09003 * 109.46992 * 302.46641 * 1 2 3 26 26 H 1.08996 * 109.47208 * 62.46910 * 1 2 3 27 27 H 1.09004 * 113.61621 * 156.24719 * 8 3 2 28 28 H 1.09003 * 113.61841 * 25.34936 * 8 3 2 29 29 H 0.97002 * 119.99542 * 24.99923 * 11 9 8 30 30 H 1.08000 * 125.80634 * 0.07147 * 15 14 12 31 31 H 1.08999 * 109.47479 * 269.69978 * 17 16 15 32 32 H 1.09002 * 109.46788 * 29.70231 * 17 16 15 33 33 H 1.09006 * 109.47185 * 149.69369 * 17 16 15 34 34 H 1.09000 * 109.46842 * 90.00793 * 19 18 16 35 35 H 0.96700 * 113.99664 * 180.02562 * 20 19 18 36 36 H 1.48505 * 110.00140 * 298.68720 * 21 19 18 37 37 H 1.48504 * 109.99980 * 60.00163 * 21 19 18 38 38 H 1.08004 * 126.83077 * 180.02562 * 22 18 16 39 39 H 1.09008 * 113.60825 * 334.57697 * 23 3 2 40 40 H 1.09001 * 113.61800 * 203.67503 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7297 2.0808 1.2888 5 9 0.4130 2.5533 1.2716 6 9 1.9074 1.2356 2.3895 7 9 2.6121 3.1622 1.3840 8 6 1.7191 2.1093 -1.2782 9 6 2.9952 1.4854 -1.8672 10 1 2.8222 0.5390 -2.3794 11 7 3.7954 2.4229 -2.6590 12 6 4.6190 1.9608 -3.6207 13 8 4.6981 0.7655 -3.8307 14 6 5.4237 2.9032 -4.4162 15 6 5.4461 4.2658 -4.3010 16 7 6.3106 4.7551 -5.2102 17 6 6.6162 6.1758 -5.3950 18 6 6.8661 3.7379 -5.9304 19 6 7.8770 3.8973 -7.0366 20 8 7.6731 5.1509 -7.6913 21 14 7.6741 2.5136 -8.2674 22 6 6.3631 2.5701 -5.4924 23 6 3.4895 1.3233 -0.4200 24 1 -0.3633 -1.0267 0.0443 25 1 -0.3633 0.5517 0.8671 26 1 -0.3633 0.4750 -0.9112 27 1 1.7845 3.1886 -1.1397 28 1 0.8067 1.8018 -1.7892 29 1 3.7325 3.3762 -2.4912 30 1 4.8691 4.8502 -3.5995 31 1 5.9329 6.6019 -6.1296 32 1 6.5012 6.6987 -4.4455 33 1 7.6421 6.2840 -5.7474 34 1 8.8826 3.8657 -6.6171 35 1 8.2899 5.3208 -8.4165 36 1 7.9150 1.2060 -7.6059 37 1 6.3070 2.5454 -8.8466 38 1 6.6035 1.5832 -5.8596 39 1 4.0064 0.3810 -0.2380 40 1 4.0390 2.1876 -0.0468 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_13287730.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:43:09 Heat of formation + Delta-G solvation = -169.722098 kcal Electronic energy + Delta-G solvation = -29647.887197 eV Core-core repulsion = 24824.091174 eV Total energy + Delta-G solvation = -4823.796022 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.118 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -51.19351 -48.74452 -48.61606 -42.49707 -41.50238 -39.71810 -37.83551 -37.27360 -34.34841 -33.74612 -31.58924 -29.13681 -28.17674 -27.63720 -26.87961 -26.28181 -24.51947 -23.07087 -21.45741 -21.00554 -20.40139 -19.70810 -19.47630 -19.18171 -18.56849 -18.44978 -17.31909 -17.13419 -16.82643 -16.54483 -16.36616 -15.89737 -15.77902 -15.57638 -15.52673 -15.44720 -15.39084 -15.09087 -14.84970 -14.81219 -14.80483 -14.63335 -14.43511 -13.79292 -13.69481 -13.49012 -13.46800 -13.28875 -13.19976 -13.10042 -12.76485 -12.70435 -12.55404 -11.91746 -11.77986 -11.04760 -10.83366 -10.72513 -10.12992 -9.63264 -9.23821 -5.03504 0.70674 0.99149 1.39768 1.48396 1.68257 1.86480 2.00851 2.06941 2.20820 2.49305 2.59049 2.64353 2.83472 3.05452 3.28053 3.40842 3.51250 3.58932 3.72675 3.77162 3.91766 4.11942 4.12736 4.17312 4.21957 4.27693 4.30857 4.35606 4.39498 4.48025 4.54651 4.62847 4.73704 4.77870 4.90055 4.94792 5.39695 5.62257 5.66045 5.93879 6.09886 6.37657 6.54450 7.36940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.329 6.329 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.181 7.181 6 F -0.172 7.172 7 F -0.175 7.175 8 C -0.162 4.162 9 C 0.144 3.856 10 H 0.131 0.869 11 N -0.722 5.722 12 C 0.595 3.405 13 O -0.537 6.537 14 C -0.228 4.228 15 C 0.052 3.948 16 N -0.420 5.420 17 C 0.075 3.925 18 C 0.028 3.972 19 C -0.047 4.047 20 O -0.552 6.552 21 Si 0.707 3.293 22 C -0.145 4.145 23 C -0.132 4.132 24 H 0.103 0.897 25 H 0.053 0.947 26 H 0.055 0.945 27 H 0.107 0.893 28 H 0.100 0.900 29 H 0.400 0.600 30 H 0.173 0.827 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.096 0.904 34 H 0.079 0.921 35 H 0.388 0.612 36 H -0.251 1.251 37 H -0.252 1.252 38 H 0.150 0.850 39 H 0.102 0.898 40 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.396 6.226 -3.583 7.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.247 6.247 3 C 0.002 3.998 4 C 0.385 3.615 5 F -0.162 7.162 6 F -0.154 7.154 7 F -0.157 7.157 8 C -0.201 4.201 9 C 0.038 3.962 10 H 0.148 0.852 11 N -0.373 5.373 12 C 0.385 3.615 13 O -0.414 6.414 14 C -0.238 4.238 15 C -0.084 4.084 16 N -0.094 5.094 17 C -0.066 4.066 18 C -0.081 4.081 19 C -0.157 4.157 20 O -0.359 6.359 21 Si 0.606 3.394 22 C -0.169 4.169 23 C -0.171 4.171 24 H 0.121 0.879 25 H 0.072 0.928 26 H 0.074 0.926 27 H 0.126 0.874 28 H 0.118 0.882 29 H 0.234 0.766 30 H 0.190 0.810 31 H 0.097 0.903 32 H 0.098 0.902 33 H 0.115 0.885 34 H 0.097 0.903 35 H 0.236 0.764 36 H -0.176 1.176 37 H -0.177 1.177 38 H 0.168 0.832 39 H 0.121 0.879 40 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.731 4.875 -3.568 6.285 hybrid contribution -0.575 1.163 1.195 1.764 sum 1.156 6.038 -2.374 6.590 Atomic orbital electron populations 1.23161 0.79410 1.04526 1.01453 1.88133 1.21175 1.21447 1.93941 1.23560 1.00018 0.86515 0.89756 1.21073 0.74274 0.78615 0.87515 1.93191 1.36873 1.89308 1.96842 1.93228 1.94914 1.70567 1.56643 1.93173 1.68883 1.57031 1.96581 1.24011 1.00700 1.01178 0.94165 1.22189 0.89135 0.94982 0.89869 0.85150 1.45722 1.44459 1.09998 1.37133 1.17384 0.78224 0.87518 0.78413 1.90801 1.66164 1.16110 1.68325 1.20198 1.06990 0.91948 1.04674 1.21934 0.96581 0.93798 0.96105 1.43497 1.31964 1.07445 1.26532 1.22188 1.04314 0.77282 1.02829 1.19802 1.02788 0.87407 0.98109 1.24393 0.97749 0.96473 0.97036 1.86414 1.61195 1.36284 1.52053 0.95643 0.85428 0.75905 0.82412 1.21599 0.99545 0.96820 0.98887 1.23748 0.91210 1.05967 0.96170 0.87884 0.92799 0.92615 0.87440 0.88167 0.76567 0.80973 0.90281 0.90186 0.88534 0.90281 0.76354 1.17608 1.17670 0.83240 0.87935 0.86712 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.05 16 2 O -0.33 -0.46 10.33 -35.23 -0.36 -0.83 16 3 C 0.04 0.01 0.85 -89.81 -0.08 -0.07 16 4 C 0.44 0.56 2.52 37.16 0.09 0.65 16 5 F -0.18 -0.25 15.24 2.25 0.03 -0.21 16 6 F -0.17 -0.53 17.09 2.25 0.04 -0.50 16 7 F -0.18 -0.17 15.82 2.25 0.04 -0.14 16 8 C -0.16 0.28 6.67 -25.92 -0.17 0.10 16 9 C 0.14 0.01 4.18 -67.12 -0.28 -0.27 16 10 H 0.13 0.27 7.46 -51.93 -0.39 -0.12 16 11 N -0.72 0.02 5.34 -54.15 -0.29 -0.27 16 12 C 0.60 2.31 7.81 -12.60 -0.10 2.21 16 13 O -0.54 -4.31 16.57 5.25 0.09 -4.22 16 14 C -0.23 -0.70 6.29 -103.35 -0.65 -1.35 16 15 C 0.05 0.01 10.83 -16.84 -0.18 -0.18 16 16 N -0.42 -0.26 3.09 -119.89 -0.37 -0.63 16 17 C 0.07 -0.17 9.80 59.84 0.59 0.41 16 18 C 0.03 0.06 6.17 -81.86 -0.51 -0.45 16 19 C -0.05 0.05 2.85 36.01 0.10 0.15 16 20 O -0.55 1.27 10.31 -35.23 -0.36 0.91 16 21 Si 0.71 -0.81 31.23 -169.99 -5.31 -6.12 16 22 C -0.14 -0.58 9.49 -37.50 -0.36 -0.93 16 23 C -0.13 0.01 7.13 -25.92 -0.18 -0.17 16 24 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 25 H 0.05 -0.02 6.25 -51.93 -0.32 -0.35 16 26 H 0.06 -0.11 6.75 -51.93 -0.35 -0.46 16 27 H 0.11 -0.35 8.04 -51.93 -0.42 -0.77 16 28 H 0.10 -0.23 6.73 -51.93 -0.35 -0.58 16 29 H 0.40 -1.23 7.67 -40.82 -0.31 -1.55 16 30 H 0.17 -0.68 7.45 -52.49 -0.39 -1.07 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.08 -0.34 8.13 -51.93 -0.42 -0.77 16 33 H 0.10 -0.24 6.75 -51.93 -0.35 -0.59 16 34 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 35 H 0.39 -2.74 8.74 45.56 0.40 -2.34 16 36 H -0.25 -0.46 6.89 56.52 0.39 -0.07 16 37 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 38 H 0.15 0.69 6.74 -52.48 -0.35 0.33 16 39 H 0.10 0.07 8.14 -51.92 -0.42 -0.35 16 40 H 0.11 -0.14 7.01 -51.93 -0.36 -0.50 16 LS Contribution 344.15 15.07 5.19 5.19 Total: 0.00 -10.51 344.15 -6.50 -17.01 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -4.52 Total: -11.35 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -0.67 Total: 1.16 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.66 Total: -0.90 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.64 Total: -4.14 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.11 Total: -0.84 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.31 Total: -6.12 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -10.51 -6.50 -17.01 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_13287730.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.709 kcal (2) G-P(sol) polarization free energy of solvation -10.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.500 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds